| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is erpA1 [H]
Identifier: 78065243
GI number: 78065243
Start: 662625
End: 662996
Strand: Direct
Name: erpA1 [H]
Synonym: Bcep18194_A3767
Alternate gene names: 78065243
Gene position: 662625-662996 (Clockwise)
Preceding gene: 78065242
Following gene: 78065245
Centisome position: 17.94
GC content: 60.22
Gene sequence:
>372_bases ATGAACGCTGTTACCGAATCCGCAGCAACGACGGCCGAAATGCCGGTTCCGTTCGTCTTCACCGACGCCGCAGCCGACAA GGTCAAGCAACTGATCGACGAAGAGGGCAATCCCGACCTGAAGCTGCGCGTGTTCGTGCAGGGCGGCGGCTGCTCCGGCT TCCAGTATGGCTTCACGTTCGACGAGGAAGTCAACGAGGACGACACCGTGATGAACAAGAACGGCGTCCAGCTCCTGATC GACTCGATGAGCTACCAGTACCTGGTCGGCGCAGAGATCGACTACAAGGACGACCTCAACGGCGCCCAGTTCGTGATCAA GAACCCGAACGCGAGCACCACCTGCGGGTGCGGTTCGTCGTTCTCGGTCTGA
Upstream 100 bases:
>100_bases TGTTTGATGAAATCGACAAGAACCTATTGATTTCATGGACTTCAGCACGATCTTCTGATCGGCCCTACAATAGCGGCTAA AGCTTTTTGGAGAGTTCGCA
Downstream 100 bases:
>100_bases GCACACGGCTGATCCGACCCGGTTCGCCGGAATGAAAAACGGGGCTTCATGCCCCGTTTTTTTATGCCCGTTCGCAATGG CGATGCGGTGCCCGCCGTAT
Product: iron-sulfur cluster insertion protein ErpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MNAVTESAATTAEMPVPFVFTDAAADKVKQLIDEEGNPDLKLRVFVQGGGCSGFQYGFTFDEEVNEDDTVMNKNGVQLLI DSMSYQYLVGAEIDYKDDLNGAQFVIKNPNASTTCGCGSSFSV
Sequences:
>Translated_123_residues MNAVTESAATTAEMPVPFVFTDAAADKVKQLIDEEGNPDLKLRVFVQGGGCSGFQYGFTFDEEVNEDDTVMNKNGVQLLI DSMSYQYLVGAEIDYKDDLNGAQFVIKNPNASTTCGCGSSFSV >Mature_123_residues MNAVTESAATTAEMPVPFVFTDAAADKVKQLIDEEGNPDLKLRVFVQGGGCSGFQYGFTFDEEVNEDDTVMNKNGVQLLI DSMSYQYLVGAEIDYKDDLNGAQFVIKNPNASTTCGCGSSFSV
Specific function: Required for insertion of 4Fe-4S clusters (Potential) [H]
COG id: COG0316
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hesB/iscA family [H]
Homologues:
Organism=Homo sapiens, GI160420328, Length=83, Percent_Identity=45.7831325301205, Blast_Score=85, Evalue=1e-17, Organism=Homo sapiens, GI52426768, Length=106, Percent_Identity=32.0754716981132, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1786351, Length=111, Percent_Identity=61.2612612612613, Blast_Score=154, Evalue=1e-39, Organism=Escherichia coli, GI1788877, Length=105, Percent_Identity=37.1428571428571, Blast_Score=68, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71998452, Length=105, Percent_Identity=39.0476190476191, Blast_Score=83, Evalue=3e-17, Organism=Caenorhabditis elegans, GI25146411, Length=120, Percent_Identity=27.5, Blast_Score=72, Evalue=6e-14, Organism=Caenorhabditis elegans, GI193209025, Length=106, Percent_Identity=29.2452830188679, Blast_Score=70, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6323001, Length=97, Percent_Identity=40.2061855670103, Blast_Score=79, Evalue=2e-16, Organism=Drosophila melanogaster, GI24649697, Length=83, Percent_Identity=48.1927710843374, Blast_Score=84, Evalue=1e-17, Organism=Drosophila melanogaster, GI24642263, Length=107, Percent_Identity=33.6448598130841, Blast_Score=69, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000361 - InterPro: IPR016092 - InterPro: IPR017870 - InterPro: IPR023063 [H]
Pfam domain/function: PF01521 Fe-S_biosyn [H]
EC number: NA
Molecular weight: Translated: 13255; Mature: 13255
Theoretical pI: Translated: 3.79; Mature: 3.79
Prosite motif: PS01152 HESB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAVTESAATTAEMPVPFVFTDAAADKVKQLIDEEGNPDLKLRVFVQGGGCSGFQYGFTF CCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEECCEEE DEEVNEDDTVMNKNGVQLLIDSMSYQYLVGAEIDYKDDLNGAQFVIKNPNASTTCGCGSS CCCCCCCCEEECCCCEEEEEECCCEEEEECCCCCCCCCCCCCEEEEECCCCCCEECCCCC FSV CCC >Mature Secondary Structure MNAVTESAATTAEMPVPFVFTDAAADKVKQLIDEEGNPDLKLRVFVQGGGCSGFQYGFTF CCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEECCEEE DEEVNEDDTVMNKNGVQLLIDSMSYQYLVGAEIDYKDDLNGAQFVIKNPNASTTCGCGSS CCCCCCCCEEECCCCEEEEEECCCEEEEECCCCCCCCCCCCCEEEEECCCCCCEECCCCC FSV CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA