| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is gltK [H]
Identifier: 78065233
GI number: 78065233
Start: 649945
End: 650622
Strand: Direct
Name: gltK [H]
Synonym: Bcep18194_A3757
Alternate gene names: 78065233
Gene position: 649945-650622 (Clockwise)
Preceding gene: 78065232
Following gene: 78065234
Centisome position: 17.59
GC content: 64.16
Gene sequence:
>678_bases ATGCATCAGTTCGACTGGAGTAGTATTCCCGGCGCGCTGCCGACGCTGTGGACGGGGGCGGTCGTCACGTTCCAGATCAC GCTGATCGCGATCGTGGTCGGGATCGTCTGGGGCACGCTGCTGGCGCTGATGCGGCTGTCGGGTGTGAAGCCGCTCGCGT GGTTCGCGCAGGGCTACGTGACGGTGTTTCGCTCGATCCCGCTCGTGATGGTGCTGCTGTGGTTCTTCCTGATCGTGCCG CAGCTGCTGCAGGGCGTGCTCGGGCTGTCGCCGACGATCGACATCCGTCTTGCGTCGGCGATGGTCGCGTTCTCGCTGTT CGAAGCCGCGTATTATTCCGAGATCATCCGCGCCGGCATCCAGGCGGTGCCGCGCGGGCAGGCGAACGCCGCGTTTGCGC TCGGCATGAACTACGCGCAGGCGATGCGCCTCGTGATCCTGCCGCAGGCGTTCCGCGCGATGGTGCCGCTGCTGCTCACG CAGGCGATCGTCCTGTTCCAGGATACGTCGCTCGTGTACGTGATCAGTCTCGCGGACTTCTTCCGCACGGCGGCCAACAT CGGCGATCGCGACGGCACGACCGTCGAGATGGTCCTGTTCGCCGGCGCATGCTATTTCGTGATTTGCTCGTTGGCGTCTG CACTCGTCAAGGGTCTCCAGAAAAAGGTCACAAGATGA
Upstream 100 bases:
>100_bases CGGTGACGCTCGCCTACGTGATCATCAACCTCGTCGTGATGTCGTTCATGCGCTGGATCGAAGGCCGTACGCGGCTGCCC GGCTATATCGGAGGCAAGTG
Downstream 100 bases:
>100_bases TTTCCATCAAGAACGTTTCGAAGTGGTACGGCCAGTTTCAGGTTCTCACCGACTGCACGACCGAGGTCAAGAAAGGCGAA GTGGTCGTCGTGTGCGGCCC
Product: ABC amino acid transporter, inner membrane subunit
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MHQFDWSSIPGALPTLWTGAVVTFQITLIAIVVGIVWGTLLALMRLSGVKPLAWFAQGYVTVFRSIPLVMVLLWFFLIVP QLLQGVLGLSPTIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQANAAFALGMNYAQAMRLVILPQAFRAMVPLLLT QAIVLFQDTSLVYVISLADFFRTAANIGDRDGTTVEMVLFAGACYFVICSLASALVKGLQKKVTR
Sequences:
>Translated_225_residues MHQFDWSSIPGALPTLWTGAVVTFQITLIAIVVGIVWGTLLALMRLSGVKPLAWFAQGYVTVFRSIPLVMVLLWFFLIVP QLLQGVLGLSPTIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQANAAFALGMNYAQAMRLVILPQAFRAMVPLLLT QAIVLFQDTSLVYVISLADFFRTAANIGDRDGTTVEMVLFAGACYFVICSLASALVKGLQKKVTR >Mature_225_residues MHQFDWSSIPGALPTLWTGAVVTFQITLIAIVVGIVWGTLLALMRLSGVKPLAWFAQGYVTVFRSIPLVMVLLWFFLIVP QLLQGVLGLSPTIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQANAAFALGMNYAQAMRLVILPQAFRAMVPLLLT QAIVLFQDTSLVYVISLADFFRTAANIGDRDGTTVEMVLFAGACYFVICSLASALVKGLQKKVTR
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786873, Length=222, Percent_Identity=71.1711711711712, Blast_Score=320, Evalue=4e-89, Organism=Escherichia coli, GI1788226, Length=214, Percent_Identity=36.4485981308411, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI87082239, Length=210, Percent_Identity=33.8095238095238, Blast_Score=107, Evalue=7e-25, Organism=Escherichia coli, GI1786874, Length=214, Percent_Identity=29.9065420560748, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1787030, Length=226, Percent_Identity=29.2035398230088, Blast_Score=91, Evalue=6e-20, Organism=Escherichia coli, GI1787087, Length=227, Percent_Identity=28.6343612334802, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1788645, Length=217, Percent_Identity=25.8064516129032, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI48994930, Length=129, Percent_Identity=33.3333333333333, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1787086, Length=214, Percent_Identity=25.2336448598131, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1788646, Length=208, Percent_Identity=25, Blast_Score=71, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24523; Mature: 24523
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHQFDWSSIPGALPTLWTGAVVTFQITLIAIVVGIVWGTLLALMRLSGVKPLAWFAQGYV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH TVFRSIPLVMVLLWFFLIVPQLLQGVLGLSPTIDIRLASAMVAFSLFEAAYYSEIIRAGI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAVPRGQANAAFALGMNYAQAMRLVILPQAFRAMVPLLLTQAIVLFQDTSLVYVISLADF HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH FRTAANIGDRDGTTVEMVLFAGACYFVICSLASALVKGLQKKVTR HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHQFDWSSIPGALPTLWTGAVVTFQITLIAIVVGIVWGTLLALMRLSGVKPLAWFAQGYV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH TVFRSIPLVMVLLWFFLIVPQLLQGVLGLSPTIDIRLASAMVAFSLFEAAYYSEIIRAGI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAVPRGQANAAFALGMNYAQAMRLVILPQAFRAMVPLLLTQAIVLFQDTSLVYVISLADF HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH FRTAANIGDRDGTTVEMVLFAGACYFVICSLASALVKGLQKKVTR HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]