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The map label for this gene is alc2 [H]

Identifier: 78065209

GI number: 78065209

Start: 623919

End: 624926

Strand: Direct

Name: alc2 [H]

Synonym: Bcep18194_A3733

Alternate gene names: 78065209

Gene position: 623919-624926 (Clockwise)

Preceding gene: 78065208

Following gene: 78065210

Centisome position: 16.89

GC content: 69.25

Gene sequence:

>1008_bases
ATGGCAGCCCCCATCCTCGATCCGAATGCGCCGGCCTTCACGCGGCGCTACATGAACCTCGCCGACCCGCGCCTCGGGGC
GCTGGCGCTCTTTGCCAGCGACGAATTCTTCGCGCCGAAGGAGCGCATGCTGAATCCTGAGCCGGCCGTGTTCATTCCCG
GCAAGTACGACGACCACGGCAAGTGGATGGACGGCTGGGAAACGCGCCGCAAGCGCACGACCGGCCACGACTTCTGCGTG
GTGCGGCTCGCGCGGCCGGGCGTGATCTACGGTGTCGACCTCGATACGAGCCACTTCACCGGCAACTTCCCGCCGGCCGC
GTCGATCGACGCATGCGTTGCCGAAGGCGACATGCCGCCCGACGACGCGCAATGGCGCCCGATCGTCCCGGCGACGACGC
TGCAGGGCAATTCGCATCACTACGTGAGCGTCGACGATGCGCAGCCCTATACGCACCTGCGCGTGAACCTGTACCCGGAC
GGCGGCCTCGCACGGCTGCGCGTGTACGGCCAGCCGCAGCGCGACTGGCGCCAGGTGCCGGCCGGCGAGCTCGTCGATCT
CGCGGCAACCGAGAACGGCGGCTACCTCGTGGCCGCGAACAACCAGCACTTCGGCCCGGCGTCGCAGATGCTGATGCCGG
GGCGCGGCGTGAACATGGGCGACGGCTGGGAAACGCGGCGCCGCCGCGAGCCCGGCAACGACTGGGCGATCGTCGCGCTC
GCGCGGCCGGGCATCATCCGGCGCGTCGAGGTCGATACCGCGTTCTTCAAGGGCAATTTCCCCGACCGCTGCTCGCTGCA
GGCTGCACAGGTCGCAGGCGGCACCGACGATTCGCTCGTCACGCAGGCGATGTTCTGGGCCGAGCTGCTCGGCGAGCAGA
AGCTGCAGATGGACCACGTCCACACGTTCGACCAGCTCGCCGCGCTCGGCCCCGTCACGCACGTGCGTTTCAACATCTTC
CCGGATGGCGGCGTGTCGCGCCTGCGTCTGTGGGGCGAGCCGGCTTGA

Upstream 100 bases:

>100_bases
CCCCCCGCGCGGGGCGGCTTCCCCTGGTCGTCCCGCGCAACCGAATTCATGTGGCCGGCGCCTCGAAGCGCCGGCACGTC
ATCGAACCTCAGGAGACGAC

Downstream 100 bases:

>100_bases
AGGAGGGCAACGGCATGAGCGAATCCCACATCCTGCGCGTCGAGCGCCTGACGCGCGAAGCGTTCGCGCCGTTCGGCGAC
GTGATCGCGCTCGAAGGCGC

Product: allantoicase

Products: NA

Alternate protein names: Allantoate amidinohydrolase 2 [H]

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MAAPILDPNAPAFTRRYMNLADPRLGALALFASDEFFAPKERMLNPEPAVFIPGKYDDHGKWMDGWETRRKRTTGHDFCV
VRLARPGVIYGVDLDTSHFTGNFPPAASIDACVAEGDMPPDDAQWRPIVPATTLQGNSHHYVSVDDAQPYTHLRVNLYPD
GGLARLRVYGQPQRDWRQVPAGELVDLAATENGGYLVAANNQHFGPASQMLMPGRGVNMGDGWETRRRREPGNDWAIVAL
ARPGIIRRVEVDTAFFKGNFPDRCSLQAAQVAGGTDDSLVTQAMFWAELLGEQKLQMDHVHTFDQLAALGPVTHVRFNIF
PDGGVSRLRLWGEPA

Sequences:

>Translated_335_residues
MAAPILDPNAPAFTRRYMNLADPRLGALALFASDEFFAPKERMLNPEPAVFIPGKYDDHGKWMDGWETRRKRTTGHDFCV
VRLARPGVIYGVDLDTSHFTGNFPPAASIDACVAEGDMPPDDAQWRPIVPATTLQGNSHHYVSVDDAQPYTHLRVNLYPD
GGLARLRVYGQPQRDWRQVPAGELVDLAATENGGYLVAANNQHFGPASQMLMPGRGVNMGDGWETRRRREPGNDWAIVAL
ARPGIIRRVEVDTAFFKGNFPDRCSLQAAQVAGGTDDSLVTQAMFWAELLGEQKLQMDHVHTFDQLAALGPVTHVRFNIF
PDGGVSRLRLWGEPA
>Mature_334_residues
AAPILDPNAPAFTRRYMNLADPRLGALALFASDEFFAPKERMLNPEPAVFIPGKYDDHGKWMDGWETRRKRTTGHDFCVV
RLARPGVIYGVDLDTSHFTGNFPPAASIDACVAEGDMPPDDAQWRPIVPATTLQGNSHHYVSVDDAQPYTHLRVNLYPDG
GLARLRVYGQPQRDWRQVPAGELVDLAATENGGYLVAANNQHFGPASQMLMPGRGVNMGDGWETRRRREPGNDWAIVALA
RPGIIRRVEVDTAFFKGNFPDRCSLQAAQVAGGTDDSLVTQAMFWAELLGEQKLQMDHVHTFDQLAALGPVTHVRFNIFP
DGGVSRLRLWGEPA

Specific function: Unknown

COG id: COG4266

COG function: function code F; Allantoicase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the allantoicase family [H]

Homologues:

Organism=Homo sapiens, GI144953901, Length=368, Percent_Identity=38.5869565217391, Blast_Score=255, Evalue=3e-68,
Organism=Saccharomyces cerevisiae, GI6322220, Length=331, Percent_Identity=34.7432024169184, Blast_Score=209, Evalue=5e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005164
- InterPro:   IPR015908
- InterPro:   IPR008979 [H]

Pfam domain/function: PF03561 Allantoicase [H]

EC number: =3.5.3.4 [H]

Molecular weight: Translated: 37085; Mature: 36954

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPILDPNAPAFTRRYMNLADPRLGALALFASDEFFAPKERMLNPEPAVFIPGKYDDHG
CCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHCCCCCCCEEECCCCCCCC
KWMDGWETRRKRTTGHDFCVVRLARPGVIYGVDLDTSHFTGNFPPAASIDACVAEGDMPP
CCCCCHHHHHHCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCC
DDAQWRPIVPATTLQGNSHHYVSVDDAQPYTHLRVNLYPDGGLARLRVYGQPQRDWRQVP
CCCCCCCCCCEEEECCCCCEEEEECCCCCCEEEEEEEECCCCEEEEEEECCCHHHHHHCC
AGELVDLAATENGGYLVAANNQHFGPASQMLMPGRGVNMGDGWETRRRREPGNDWAIVAL
CCCEEEEEEECCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCHHHHCCCCCCCEEEEEE
ARPGIIRRVEVDTAFFKGNFPDRCSLQAAQVAGGTDDSLVTQAMFWAELLGEQKLQMDHV
ECCCEEEEEEECEEEEECCCCCCCCCEEHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
HTFDQLAALGPVTHVRFNIFPDGGVSRLRLWGEPA
HHHHHHHHHCCEEEEEEEEECCCCCEEEEEECCCC
>Mature Secondary Structure 
AAPILDPNAPAFTRRYMNLADPRLGALALFASDEFFAPKERMLNPEPAVFIPGKYDDHG
CCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHCCCCCCCEEECCCCCCCC
KWMDGWETRRKRTTGHDFCVVRLARPGVIYGVDLDTSHFTGNFPPAASIDACVAEGDMPP
CCCCCHHHHHHCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCC
DDAQWRPIVPATTLQGNSHHYVSVDDAQPYTHLRVNLYPDGGLARLRVYGQPQRDWRQVP
CCCCCCCCCCEEEECCCCCEEEEECCCCCCEEEEEEEECCCCEEEEEEECCCHHHHHHCC
AGELVDLAATENGGYLVAANNQHFGPASQMLMPGRGVNMGDGWETRRRREPGNDWAIVAL
CCCEEEEEEECCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCHHHHCCCCCCCEEEEEE
ARPGIIRRVEVDTAFFKGNFPDRCSLQAAQVAGGTDDSLVTQAMFWAELLGEQKLQMDHV
ECCCEEEEEEECEEEEECCCCCCCCCEEHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
HTFDQLAALGPVTHVRFNIFPDGGVSRLRLWGEPA
HHHHHHHHHCCEEEEEEEEECCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA