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The map label for this gene is 78048414

Identifier: 78048414

GI number: 78048414

Start: 3250624

End: 3251052

Strand: Reverse

Name: 78048414

Synonym: XCV2858

Alternate gene names: NA

Gene position: 3251052-3250624 (Counterclockwise)

Preceding gene: 78048415

Following gene: 78048411

Centisome position: 62.78

GC content: 64.1

Gene sequence:

>429_bases
ATGAACCGATGGCTGCGCTGGTCGCTGCTCTGCGTGCTGGGCCTGACGAGCGCCTGCGCCAGCACGCAATCGCGGCAGAC
GCTGTACGACGAACTCGGCGGGCGGGCCGGCATTGAAGCGCTGGTGGAAACCATGCTCTCGCGCATCGCCGACGACCCAC
GCATCGTCGATAAATTCGCGCGCGTCAATATCGTCATGCTCAATGAGCGCCTGGTGCAGAAGTTCTGCCATGTCGCCGAC
GGCCCATGCCCGGACACCGCCAAATCGATGCAGCAGGCGCACGCGCACCTGGCCATCCGCGAAGGCGACTTCAATGCCCT
GGTCGAGGATCTGAACTGGGCCATGGATCAGCGCAAGATTCCGCGTCGCACGCAAAACCGCCTGCTGGCGCGTCTGGCGG
CCATGCACGGCGAGATCGTCAATCACTGA

Upstream 100 bases:

>100_bases
GCAAGCATGTCTCGTTGACCGCTGCATTCGCCGATCTTGGCGACATCGCCACGCTTGCCGATCAGCGCGGCCCTTATCTC
TCCTTGCAGGTGGCGTTCTG

Downstream 100 bases:

>100_bases
TTGACACCTACCAAGCGTGGTGCTCCGTGTCGCAACGGTCAGCGATCATGGCGAATTCAACCCGGTTCACCAGGGATGTA
TGACTCGGGTCGGGAATGAA

Product: globin

Products: NA

Alternate protein names: Protozoan/Cyanobacterial Globin Family Protein; Cyanoglobin; Globin Family Protein; Cyanoglobin Family Protein; Hemoglobin Domain Protein; Hemoglobin-Like Protein HBN; Globin Lipoprotein; Hemoglobin-Like Protein; Globin Protein; Protozoan/Cyanobacterial Globin Protein

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MNRWLRWSLLCVLGLTSACASTQSRQTLYDELGGRAGIEALVETMLSRIADDPRIVDKFARVNIVMLNERLVQKFCHVAD
GPCPDTAKSMQQAHAHLAIREGDFNALVEDLNWAMDQRKIPRRTQNRLLARLAAMHGEIVNH

Sequences:

>Translated_142_residues
MNRWLRWSLLCVLGLTSACASTQSRQTLYDELGGRAGIEALVETMLSRIADDPRIVDKFARVNIVMLNERLVQKFCHVAD
GPCPDTAKSMQQAHAHLAIREGDFNALVEDLNWAMDQRKIPRRTQNRLLARLAAMHGEIVNH
>Mature_142_residues
MNRWLRWSLLCVLGLTSACASTQSRQTLYDELGGRAGIEALVETMLSRIADDPRIVDKFARVNIVMLNERLVQKFCHVAD
GPCPDTAKSMQQAHAHLAIREGDFNALVEDLNWAMDQRKIPRRTQNRLLARLAAMHGEIVNH

Specific function: Unknown

COG id: COG2346

COG function: function code R; Truncated hemoglobins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16064; Mature: 16064

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRWLRWSLLCVLGLTSACASTQSRQTLYDELGGRAGIEALVETMLSRIADDPRIVDKFA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHH
RVNIVMLNERLVQKFCHVADGPCPDTAKSMQQAHAHLAIREGDFNALVEDLNWAMDQRKI
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
PRRTQNRLLARLAAMHGEIVNH
CHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNRWLRWSLLCVLGLTSACASTQSRQTLYDELGGRAGIEALVETMLSRIADDPRIVDKFA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHH
RVNIVMLNERLVQKFCHVADGPCPDTAKSMQQAHAHLAIREGDFNALVEDLNWAMDQRKI
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
PRRTQNRLLARLAAMHGEIVNH
CHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA