Click here to switch to the map view.

The map label for this gene is yhgN [H]

Identifier: 78048380

GI number: 78048380

Start: 3215329

End: 3215928

Strand: Reverse

Name: yhgN [H]

Synonym: XCV2824

Alternate gene names: 78048380

Gene position: 3215928-3215329 (Counterclockwise)

Preceding gene: 78048381

Following gene: 78048379

Centisome position: 62.1

GC content: 64.83

Gene sequence:

>600_bases
ATGACCATTCTTTCTGCGGCGCTGCTGCTGTTTCTGATTCTCGACCCGCTGGGCAACATTCCAGTGTTCCTCAGCGTGCT
CAAGCCGCTGCCGCCCAAGCGCCAGCGTTTCGTGCTTGCGCGTGAACTGCTGATCGCGCTGTGCGTGTTGATGGCGTTCC
TGTGGGGCGGCAAGTACGCGCTGGAACTGATGCACTTGCGCCAGGAATCGGTGGCCATTGCCGGCGGCATCGTGCTGTTT
GTGATCGGCATCCGCATGATCTTCCCGCGGCCCGAAGGCCTGATGGGCGAAATTCCCGACGGCGAACCCTTCATCGTGCC
GCTGGCCATCCCGCTGGTGGCCGGCCCGTCCGGCATGGCCGCGGTGATGCTCATGGGCAGCAACGAGCCCACGCGGCTGT
GGGACTGGAGCCTTGCGCTGATGATCGCCTGGATCGGCGCCTCGGCGATCCTGGCCGCCGCGCCGCTGCTGTACAAACTG
CTCGGCCACCGCGCCCTGACGGCCATCGAGCGCCTGATGGGCATGCTGCTGGTCGCCATCTCGGTACAGATGTTCCTGGA
CGGCCTGGGCACGTACTTCAAGCTGCCGGTGTCGATCTAG

Upstream 100 bases:

>100_bases
ACAACGACGCGGTCGATGCCGCACGTTACGCACCTGCATGCGTCAGCATGCTGTCAGCCGCAGGGGCGACGCATCGCGGT
GCGATCTGGAGTCCGCAGGT

Downstream 100 bases:

>100_bases
CGCAGCTCGGGGCGGCTTGGCGATCGCGCCGCGTGTGTGCGTCGACACGCATCGATGGCCCGGGGTTTCAACCCGCACTG
GCCGTGGGTTACGTGCGCAC

Product: putative MarC transporter family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MTILSAALLLFLILDPLGNIPVFLSVLKPLPPKRQRFVLARELLIALCVLMAFLWGGKYALELMHLRQESVAIAGGIVLF
VIGIRMIFPRPEGLMGEIPDGEPFIVPLAIPLVAGPSGMAAVMLMGSNEPTRLWDWSLALMIAWIGASAILAAAPLLYKL
LGHRALTAIERLMGMLLVAISVQMFLDGLGTYFKLPVSI

Sequences:

>Translated_199_residues
MTILSAALLLFLILDPLGNIPVFLSVLKPLPPKRQRFVLARELLIALCVLMAFLWGGKYALELMHLRQESVAIAGGIVLF
VIGIRMIFPRPEGLMGEIPDGEPFIVPLAIPLVAGPSGMAAVMLMGSNEPTRLWDWSLALMIAWIGASAILAAAPLLYKL
LGHRALTAIERLMGMLLVAISVQMFLDGLGTYFKLPVSI
>Mature_198_residues
TILSAALLLFLILDPLGNIPVFLSVLKPLPPKRQRFVLARELLIALCVLMAFLWGGKYALELMHLRQESVAIAGGIVLFV
IGIRMIFPRPEGLMGEIPDGEPFIVPLAIPLVAGPSGMAAVMLMGSNEPTRLWDWSLALMIAWIGASAILAAAPLLYKLL
GHRALTAIERLMGMLLVAISVQMFLDGLGTYFKLPVSI

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1789842, Length=193, Percent_Identity=51.2953367875648, Blast_Score=189, Evalue=8e-50,
Organism=Escherichia coli, GI1787494, Length=198, Percent_Identity=27.2727272727273, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI1787809, Length=199, Percent_Identity=25.1256281407035, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 21599; Mature: 21468

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTILSAALLLFLILDPLGNIPVFLSVLKPLPPKRQRFVLARELLIALCVLMAFLWGGKYA
CHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LELMHLRQESVAIAGGIVLFVIGIRMIFPRPEGLMGEIPDGEPFIVPLAIPLVAGPSGMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCE
AVMLMGSNEPTRLWDWSLALMIAWIGASAILAAAPLLYKLLGHRALTAIERLMGMLLVAI
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVQMFLDGLGTYFKLPVSI
HHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TILSAALLLFLILDPLGNIPVFLSVLKPLPPKRQRFVLARELLIALCVLMAFLWGGKYA
HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LELMHLRQESVAIAGGIVLFVIGIRMIFPRPEGLMGEIPDGEPFIVPLAIPLVAGPSGMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCE
AVMLMGSNEPTRLWDWSLALMIAWIGASAILAAAPLLYKLLGHRALTAIERLMGMLLVAI
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVQMFLDGLGTYFKLPVSI
HHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]