Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
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Accession | NC_007508 |
Length | 5,178,466 |
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The map label for this gene is 78048354
Identifier: 78048354
GI number: 78048354
Start: 3179726
End: 3181204
Strand: Reverse
Name: 78048354
Synonym: XCV2798
Alternate gene names: NA
Gene position: 3181204-3179726 (Counterclockwise)
Preceding gene: 78048355
Following gene: 78048353
Centisome position: 61.43
GC content: 63.29
Gene sequence:
>1479_bases ATGACCGCCAAGCCACGCTTGAATTTCTGGCAGATCTGGAACATGTGCTTCGGCTTTCTCGGCATCCAGTTCGGCTTCGC ACTGCAGAACGCCAATGCCAGCCGTATCTTCCAGACCCTGGGCGCGCAGGTCGACGACGTGCCAGGCCTGTGGATCGCTG CACCGCTCACCGGCCTGATCGTGCAGCCGGTCATCGGTTACCTGTCCGATCGCACCTGGACCCCGTGGGGCCGCCGGCGT CCGTACTTCATGGTGGGCGCTGTCTTCACCACGCTGGCCTTGCTGGTGATGCCCAACGCGCCGATGCTCTGGGTGGCTGC CGGGACGCTGTGGGTGTTGGATGCATCGATCAACATCTCGATGGAGCCTTTCCGTGCGCTGGTGGGTGACCAATTACCGC CGTCGCAACGGCCGACCGGCTACGCGATGCAGAGTTTCTTCATTGGCATCGGCGCGATCGTCGCGAGTTTTCTGCCCTGG CTGCTGACCCATTGGGGCATTGCCAACACCGCCCCGCCAGGCCAGTTGCCCGACAGCGTGCGCTACACGTTCTACCTTGG CGCGGCGGTATTGTTCCTGTCGATCACCTGGACGGTGCTGCGTACGCGCGAGTACAGCCCAGAGCAGTTGGCCGGCTTTG ACGATGCGCATCCGCCTCTCGCACAGGTGGCAAGCACTGGCATGGCGCCGACACCCATGGCAAGCGTGCTGTGGTGCGGT CTGGGCGTCCTGCTCGCCACGGCCATCGCCTGGCAGCACGGCGACCGCATGCTGTACGTGCTGGCCGGGTTGTGTCTTGC CTACGGCGTGTTGCTTGCGTTGGCCCGCATGTTGCCCGCCACCAGCATGTTGGTGGCGATCGTGCAGGACGTGCGCAGCA TGCCGATGACGATGCGTCGCCTGGCCTGGGTGCAGTTCTTCTCGTGGTTTGCCTTGTTTGCGATGTGGATCTACACCACT GCCGCAGTGACGCAAGTGCATTTCGGTGCGAACGACACCGCTTCGGCGGCCTACAACGATGGCGCAAACTGGGTCGGCGT GTTGTTCGGCGCCTATAACGGGTTTGCTGCATTGGCTGCAGTGGTGATTCCGCTGCTGGTGCGTGCGATCGGCTTGCGCT GGGGCCATCTGTGCAACCTGTGGCTGGGTGCCGCCGGATTGTTGTCGATGCTGGTCATCCGCGACCCGCAGTGGTTGCTG CTGTCGATGGTGGGGGTCGGTTTCGCCTGGGCCTCGATCCTGTCGCTGCCGTATGCCTTGCTGTCAGACAGTGTGCCTGC TCCAAAGATGGGCGTGTACATGGGCATCTTCAATTTCTTCATCGTGATTCCGCAGTTGGTCGCCGCCAGCGCGCTGGGCT TTGTGCTGCGCGTGTGGCTGGGCGGGCAGCCGATCTATGCATTGGCCATTGGCGGGCTCAGCCTGTTGATTGCAGGCGTG TGCGTGGTGCGGGTTCCAGTGGCCTCGGGAGGGCAGTGA
Upstream 100 bases:
>100_bases CCCAATACAACGGCGGTCGCGGCGGCCGTGATGGTGTGGTCAATGCGGCGCAGGTCAGTGCGTTATTGGTCGGGCCTGCA GCACGCGTGGAGGCCGCGCC
Downstream 100 bases:
>100_bases TGCGCAGTGCGATGTATGTGGCGTTGACGATGTACGCAGGCGCGGCAATGGCGGCGCCTGCAGCCAAGGACTACTACGGC ACCCTGGAGCCGTTTGCCGC
Product: glycoside-pentoside-hexuronide:cation symporter family protein
Products: NA
Alternate protein names: Sugar Transporter; Transporter Facilitator Family; Facilitator Superfamily Permease; Facilitator Superfamily Protein; SugarCation Symporter; Facilitator Superfamily Transporter Permease; Cytoplasmic Membrane Maltose Transporter MalY; Transport Protein Facilitator Superfamily Protein; MFS Superfamily Sugcific Permease; Facilitator Superfamily Transmembrane Protein; Facilitator Family Transporter; Sucrose Transporter Protein
Number of amino acids: Translated: 492; Mature: 491
Protein sequence:
>492_residues MTAKPRLNFWQIWNMCFGFLGIQFGFALQNANASRIFQTLGAQVDDVPGLWIAAPLTGLIVQPVIGYLSDRTWTPWGRRR PYFMVGAVFTTLALLVMPNAPMLWVAAGTLWVLDASINISMEPFRALVGDQLPPSQRPTGYAMQSFFIGIGAIVASFLPW LLTHWGIANTAPPGQLPDSVRYTFYLGAAVLFLSITWTVLRTREYSPEQLAGFDDAHPPLAQVASTGMAPTPMASVLWCG LGVLLATAIAWQHGDRMLYVLAGLCLAYGVLLALARMLPATSMLVAIVQDVRSMPMTMRRLAWVQFFSWFALFAMWIYTT AAVTQVHFGANDTASAAYNDGANWVGVLFGAYNGFAALAAVVIPLLVRAIGLRWGHLCNLWLGAAGLLSMLVIRDPQWLL LSMVGVGFAWASILSLPYALLSDSVPAPKMGVYMGIFNFFIVIPQLVAASALGFVLRVWLGGQPIYALAIGGLSLLIAGV CVVRVPVASGGQ
Sequences:
>Translated_492_residues MTAKPRLNFWQIWNMCFGFLGIQFGFALQNANASRIFQTLGAQVDDVPGLWIAAPLTGLIVQPVIGYLSDRTWTPWGRRR PYFMVGAVFTTLALLVMPNAPMLWVAAGTLWVLDASINISMEPFRALVGDQLPPSQRPTGYAMQSFFIGIGAIVASFLPW LLTHWGIANTAPPGQLPDSVRYTFYLGAAVLFLSITWTVLRTREYSPEQLAGFDDAHPPLAQVASTGMAPTPMASVLWCG LGVLLATAIAWQHGDRMLYVLAGLCLAYGVLLALARMLPATSMLVAIVQDVRSMPMTMRRLAWVQFFSWFALFAMWIYTT AAVTQVHFGANDTASAAYNDGANWVGVLFGAYNGFAALAAVVIPLLVRAIGLRWGHLCNLWLGAAGLLSMLVIRDPQWLL LSMVGVGFAWASILSLPYALLSDSVPAPKMGVYMGIFNFFIVIPQLVAASALGFVLRVWLGGQPIYALAIGGLSLLIAGV CVVRVPVASGGQ >Mature_491_residues TAKPRLNFWQIWNMCFGFLGIQFGFALQNANASRIFQTLGAQVDDVPGLWIAAPLTGLIVQPVIGYLSDRTWTPWGRRRP YFMVGAVFTTLALLVMPNAPMLWVAAGTLWVLDASINISMEPFRALVGDQLPPSQRPTGYAMQSFFIGIGAIVASFLPWL LTHWGIANTAPPGQLPDSVRYTFYLGAAVLFLSITWTVLRTREYSPEQLAGFDDAHPPLAQVASTGMAPTPMASVLWCGL GVLLATAIAWQHGDRMLYVLAGLCLAYGVLLALARMLPATSMLVAIVQDVRSMPMTMRRLAWVQFFSWFALFAMWIYTTA AVTQVHFGANDTASAAYNDGANWVGVLFGAYNGFAALAAVVIPLLVRAIGLRWGHLCNLWLGAAGLLSMLVIRDPQWLLL SMVGVGFAWASILSLPYALLSDSVPAPKMGVYMGIFNFFIVIPQLVAASALGFVLRVWLGGQPIYALAIGGLSLLIAGVC VVRVPVASGGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53281; Mature: 53149
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAKPRLNFWQIWNMCFGFLGIQFGFALQNANASRIFQTLGAQVDDVPGLWIAAPLTGLI CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHH VQPVIGYLSDRTWTPWGRRRPYFMVGAVFTTLALLVMPNAPMLWVAAGTLWVLDASINIS HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEECCCCCC MEPFRALVGDQLPPSQRPTGYAMQSFFIGIGAIVASFLPWLLTHWGIANTAPPGQLPDSV HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH RYTFYLGAAVLFLSITWTVLRTREYSPEQLAGFDDAHPPLAQVASTGMAPTPMASVLWCG HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHCCCCCCHHHHHHHHH LGVLLATAIAWQHGDRMLYVLAGLCLAYGVLLALARMLPATSMLVAIVQDVRSMPMTMRR HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH LAWVQFFSWFALFAMWIYTTAAVTQVHFGANDTASAAYNDGANWVGVLFGAYNGFAALAA HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH VVIPLLVRAIGLRWGHLCNLWLGAAGLLSMLVIRDPQWLLLSMVGVGFAWASILSLPYAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LSDSVPAPKMGVYMGIFNFFIVIPQLVAASALGFVLRVWLGGQPIYALAIGGLSLLIAGV HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH CVVRVPVASGGQ HHHEEECCCCCC >Mature Secondary Structure TAKPRLNFWQIWNMCFGFLGIQFGFALQNANASRIFQTLGAQVDDVPGLWIAAPLTGLI CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHH VQPVIGYLSDRTWTPWGRRRPYFMVGAVFTTLALLVMPNAPMLWVAAGTLWVLDASINIS HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEECCCCCC MEPFRALVGDQLPPSQRPTGYAMQSFFIGIGAIVASFLPWLLTHWGIANTAPPGQLPDSV HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH RYTFYLGAAVLFLSITWTVLRTREYSPEQLAGFDDAHPPLAQVASTGMAPTPMASVLWCG HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHCCCCCCHHHHHHHHH LGVLLATAIAWQHGDRMLYVLAGLCLAYGVLLALARMLPATSMLVAIVQDVRSMPMTMRR HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH LAWVQFFSWFALFAMWIYTTAAVTQVHFGANDTASAAYNDGANWVGVLFGAYNGFAALAA HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH VVIPLLVRAIGLRWGHLCNLWLGAAGLLSMLVIRDPQWLLLSMVGVGFAWASILSLPYAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LSDSVPAPKMGVYMGIFNFFIVIPQLVAASALGFVLRVWLGGQPIYALAIGGLSLLIAGV HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH CVVRVPVASGGQ HHHEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA