Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
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Accession | NC_007508 |
Length | 5,178,466 |
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The map label for this gene is gumI
Identifier: 78048336
GI number: 78048336
Start: 3158500
End: 3159549
Strand: Reverse
Name: gumI
Synonym: XCV2780
Alternate gene names: NA
Gene position: 3159549-3158500 (Counterclockwise)
Preceding gene: 78048337
Following gene: 78048335
Centisome position: 61.01
GC content: 64.76
Gene sequence:
>1050_bases ATGAGCGCGCTTGCTCCTGCGTCAATGACGCATGCGGCAACGCAGCCGCAGGTGACGGTGCTGTTTTCCACTGAAAAGCC CAATGCCAACACCAATCCGTACCTGACTCAGCTCTACGACGCGCTGCCTGCCGCAGTGCATCCGCGCTTCTTTTCGATGC GCGATGCATTGCTGTCGCGTTACGACGTGTTGCATCTGCATTGGCCCGAATACCTGCTGCGCCATCCGACCGCTGCCGGC ACGTTGGCCAAGCAGGCCTGCGCTGCGTTGTTGTTGCTCAAGCTGCAGCTGACCGGCACGCCGGTGGTGCGCACCTTGCA CAATCTTGCGCCGCATGAGGACCGCGGCTGGCGCGAACGTAGCCTGCTGCGCTGGATCGACCGGCTGACGCGGCGCTGGA TTCGCATCAATGCGACCACGCCGCCACGTCCGCCGTTCACCGATACGATTCTGCACGGCCATTATCGCGACTGGTTCGCG ACCATGGAGCAGGGCAACACGGTGCCCGGACGGCTGCTGCACTTCGGTCTGATCCGCCCGTACAAAGGCGTGGAAACCTT GATCGAGGTCATGCGCGAGGTCGACGATGCGCGTCTCAACCTGCGTATCGTCGGCAACCCGGCCACGCCGCAGATGCGCA GCTTGGTGGAGGACGCCTGCGCGCAGGATCCGCGGATCAGCGCATTGCTGGCCTACGTGGAAGAGCCGGTGCTGGCGCGC GAAGTCAGCGCGGCCGAACTGGTGGTGTTGCCGTATCGGCAGATGCATAACTCCGGCACCTTGCTGCTGGCGTTGTCGCT GGCGCGCCCGGTGCTGGCGCCGTGGAGCGAATCCAACGCGGCCATCGCCGAGGAAGTCGGCCCCGGTTGGGTGTTCCTGT ATAAAGGCGAGTTCGATGCCGCGCTGCTGACCGGCATGCTGGACAAGGTGCGTGCTGCGCCACGCGGCCCGGCACCGGAT CTGTCGCAGCGCGACTGGCCGCGGATCGGGCAGTTGCATTACCGCACCTATCTGGAAGCGTTGGGCAAGGATGGAGACGC CGCGCTGTGA
Upstream 100 bases:
>100_bases TGGCCTATGTGAGCCGCTATGACTGGAAGCATGTGGTCGGGCGCTACGTCGACGAATACCACGATGCGTTGGGCATTCCG CGCGTGCAGGAGGCTGTGCG
Downstream 100 bases:
>100_bases CCGCAGAGACACCTACGATGACATCTTCCACACCGCCGCCACCGCCACAGCGCAGCCTGGGGTCGCGCGCTGCCGGCGGC GCAGCGGTGACCATGCTGGG
Product: xanthan biosynthesis glycosyltransferase GumI
Products: NA
Alternate protein names: GumI Protein; Glycosyl Transferase Gt4J
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MSALAPASMTHAATQPQVTVLFSTEKPNANTNPYLTQLYDALPAAVHPRFFSMRDALLSRYDVLHLHWPEYLLRHPTAAG TLAKQACAALLLLKLQLTGTPVVRTLHNLAPHEDRGWRERSLLRWIDRLTRRWIRINATTPPRPPFTDTILHGHYRDWFA TMEQGNTVPGRLLHFGLIRPYKGVETLIEVMREVDDARLNLRIVGNPATPQMRSLVEDACAQDPRISALLAYVEEPVLAR EVSAAELVVLPYRQMHNSGTLLLALSLARPVLAPWSESNAAIAEEVGPGWVFLYKGEFDAALLTGMLDKVRAAPRGPAPD LSQRDWPRIGQLHYRTYLEALGKDGDAAL
Sequences:
>Translated_349_residues MSALAPASMTHAATQPQVTVLFSTEKPNANTNPYLTQLYDALPAAVHPRFFSMRDALLSRYDVLHLHWPEYLLRHPTAAG TLAKQACAALLLLKLQLTGTPVVRTLHNLAPHEDRGWRERSLLRWIDRLTRRWIRINATTPPRPPFTDTILHGHYRDWFA TMEQGNTVPGRLLHFGLIRPYKGVETLIEVMREVDDARLNLRIVGNPATPQMRSLVEDACAQDPRISALLAYVEEPVLAR EVSAAELVVLPYRQMHNSGTLLLALSLARPVLAPWSESNAAIAEEVGPGWVFLYKGEFDAALLTGMLDKVRAAPRGPAPD LSQRDWPRIGQLHYRTYLEALGKDGDAAL >Mature_348_residues SALAPASMTHAATQPQVTVLFSTEKPNANTNPYLTQLYDALPAAVHPRFFSMRDALLSRYDVLHLHWPEYLLRHPTAAGT LAKQACAALLLLKLQLTGTPVVRTLHNLAPHEDRGWRERSLLRWIDRLTRRWIRINATTPPRPPFTDTILHGHYRDWFAT MEQGNTVPGRLLHFGLIRPYKGVETLIEVMREVDDARLNLRIVGNPATPQMRSLVEDACAQDPRISALLAYVEEPVLARE VSAAELVVLPYRQMHNSGTLLLALSLARPVLAPWSESNAAIAEEVGPGWVFLYKGEFDAALLTGMLDKVRAAPRGPAPDL SQRDWPRIGQLHYRTYLEALGKDGDAAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39056; Mature: 38925
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALAPASMTHAATQPQVTVLFSTEKPNANTNPYLTQLYDALPAAVHPRFFSMRDALLSR CCCCCCCHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHH YDVLHLHWPEYLLRHPTAAGTLAKQACAALLLLKLQLTGTPVVRTLHNLAPHEDRGWRER HCEEEEECHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHH SLLRWIDRLTRRWIRINATTPPRPPFTDTILHGHYRDWFATMEQGNTVPGRLLHFGLIRP HHHHHHHHHHHHEEEEECCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHCCC YKGVETLIEVMREVDDARLNLRIVGNPATPQMRSLVEDACAQDPRISALLAYVEEPVLAR CCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHH EVSAAELVVLPYRQMHNSGTLLLALSLARPVLAPWSESNAAIAEEVGPGWVFLYKGEFDA HCCCCCEEEECHHHHCCCCCEEEEEEHHCCCCCCCCCCCCHHHHHCCCCEEEEECCCCHH ALLTGMLDKVRAAPRGPAPDLSQRDWPRIGQLHYRTYLEALGKDGDAAL HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SALAPASMTHAATQPQVTVLFSTEKPNANTNPYLTQLYDALPAAVHPRFFSMRDALLSR CCCCCCHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHH YDVLHLHWPEYLLRHPTAAGTLAKQACAALLLLKLQLTGTPVVRTLHNLAPHEDRGWRER HCEEEEECHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHH SLLRWIDRLTRRWIRINATTPPRPPFTDTILHGHYRDWFATMEQGNTVPGRLLHFGLIRP HHHHHHHHHHHHEEEEECCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHCCC YKGVETLIEVMREVDDARLNLRIVGNPATPQMRSLVEDACAQDPRISALLAYVEEPVLAR CCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHH EVSAAELVVLPYRQMHNSGTLLLALSLARPVLAPWSESNAAIAEEVGPGWVFLYKGEFDA HCCCCCEEEECHHHHCCCCCEEEEEEHHCCCCCCCCCCCCHHHHHCCCCEEEEECCCCHH ALLTGMLDKVRAAPRGPAPDLSQRDWPRIGQLHYRTYLEALGKDGDAAL HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA