Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
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Accession | NC_007508 |
Length | 5,178,466 |
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The map label for this gene is gumM [H]
Identifier: 78048332
GI number: 78048332
Start: 3154101
End: 3154895
Strand: Reverse
Name: gumM [H]
Synonym: XCV2776
Alternate gene names: 78048332
Gene position: 3154895-3154101 (Counterclockwise)
Preceding gene: 78048333
Following gene: 78048331
Centisome position: 60.92
GC content: 64.28
Gene sequence:
>795_bases ATGATGCAGGGCCAGCGCGTGGATGTGGAAACAACGGGGATTGCCAGCGGAACCACGCCGCCGGGTGTGGTGATTCCGTT GGGCGGCTTTCCGGTCCTGTCCACCACGCAGGAAGCCTTTGCGTTGGATCTATTCCACGCGCTGGCCGCCCGTCAGCCGC GACGGGTGTTCTTTGCCAATACCAATTTCATCGTGCAATGCCAGGCGCTGCGGACGCGCATGCGCGAGCCCAGCGTGCGC ATCGTCAACGACGGGATCGGCATGGATCTGGCTGCGCGGCTGATCCACGGCCGCCGCTTTGCCGGCAACCTCAATGGCAC CGACCTGATTCCGTATCTGTGCCGTGAGAGTGCGCAACCGCTGAAATTCTTTCTGCTGGGCGGCCGTCCGGGTGTGGGCA AGACCGCTGCGGCGACGCTGACCGGGACCTTGGGGCAGCAGGTGGTCGGCATGTGCGATGGTTATGGCGAATTTGCGGCG GCGGGCGAGGGCCTGGCCGAGCGCATCAATCGCTCCGGTGCCGATGTGCTGCTGGTGGCGTTCGGCAATCCGCTGCAGGA GCGCTGGATCCTGGACCACAGCCATGCGCTGAGCGTGCCGCTGGTGTTCGGGGTGGGCGCATTGCTCGATTTCTTGTCCG GTACCGCAAAGCGTGCGCCCGAGTGGGTGCGAGGCCTGCACATGGAGTGGATGTATCGGCTGCTCAACGAGCCACGCCGT TTGCTCAAGCGCTATAGCTGGGATTTGTTGGTGTTCTTCCGCACCTGCTTGCGCGCGGGAAAGCAGCTGCCCTGA
Upstream 100 bases:
>100_bases GTGGAGGAGTGTCTGCAACTGGGCGGCAACGGCGATTTCGATCTGGAAAAGCTGCAGGCCGGGCTGTTGGCTGCCTTCCC TTACGACCTTTGGTGATTCG
Downstream 100 bases:
>100_bases TGCAGCGCAGGCGTGTCTGGCCTAGCATGCCTGCATGCATCCGACCGCCGCCGCCCTGATCCGCTCGCTGGACCTCGCCC CGCATCCGGAAGGCGGGCAC
Product: xanthan biosynthesis glycosyltransferase GumM
Products: C55-PP-GlcNAc-ManNAcA; UDP [C]
Alternate protein names: UDP-ManNAcA transferase [H]
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MMQGQRVDVETTGIASGTTPPGVVIPLGGFPVLSTTQEAFALDLFHALAARQPRRVFFANTNFIVQCQALRTRMREPSVR IVNDGIGMDLAARLIHGRRFAGNLNGTDLIPYLCRESAQPLKFFLLGGRPGVGKTAAATLTGTLGQQVVGMCDGYGEFAA AGEGLAERINRSGADVLLVAFGNPLQERWILDHSHALSVPLVFGVGALLDFLSGTAKRAPEWVRGLHMEWMYRLLNEPRR LLKRYSWDLLVFFRTCLRAGKQLP
Sequences:
>Translated_264_residues MMQGQRVDVETTGIASGTTPPGVVIPLGGFPVLSTTQEAFALDLFHALAARQPRRVFFANTNFIVQCQALRTRMREPSVR IVNDGIGMDLAARLIHGRRFAGNLNGTDLIPYLCRESAQPLKFFLLGGRPGVGKTAAATLTGTLGQQVVGMCDGYGEFAA AGEGLAERINRSGADVLLVAFGNPLQERWILDHSHALSVPLVFGVGALLDFLSGTAKRAPEWVRGLHMEWMYRLLNEPRR LLKRYSWDLLVFFRTCLRAGKQLP >Mature_264_residues MMQGQRVDVETTGIASGTTPPGVVIPLGGFPVLSTTQEAFALDLFHALAARQPRRVFFANTNFIVQCQALRTRMREPSVR IVNDGIGMDLAARLIHGRRFAGNLNGTDLIPYLCRESAQPLKFFLLGGRPGVGKTAAATLTGTLGQQVVGMCDGYGEFAA AGEGLAERINRSGADVLLVAFGNPLQERWILDHSHALSVPLVFGVGALLDFLSGTAKRAPEWVRGLHMEWMYRLLNEPRR LLKRYSWDLLVFFRTCLRAGKQLP
Specific function: Catalyzes the synthesis of Und-PP-GlcNAc-ManNAcA (Lipid II), the second lipid-linked intermediate involved in ECA synthesis [H]
COG id: COG1922
COG function: function code M; Teichoic acid biosynthesis proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 26 family [H]
Homologues:
Organism=Escherichia coli, GI2367289, Length=159, Percent_Identity=34.5911949685535, Blast_Score=82, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023085 - InterPro: IPR004629 [H]
Pfam domain/function: PF03808 Glyco_tran_WecB [H]
EC number: 2.4.1.- [C]
Molecular weight: Translated: 28948; Mature: 28948
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQGQRVDVETTGIASGTTPPGVVIPLGGFPVLSTTQEAFALDLFHALAARQPRRVFFAN CCCCCEECEEECCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEC TNFIVQCQALRTRMREPSVRIVNDGIGMDLAARLIHGRRFAGNLNGTDLIPYLCRESAQP CCEEEEEHHHHHHHCCCCEEEEECCCCHHHHHHHHHCHHHCCCCCCCHHHHHHHHCCCCC LKFFLLGGRPGVGKTAAATLTGTLGQQVVGMCDGYGEFAAAGEGLAERINRSGADVLLVA EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEE FGNPLQERWILDHSHALSVPLVFGVGALLDFLSGTAKRAPEWVRGLHMEWMYRLLNEPRR CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHH LLKRYSWDLLVFFRTCLRAGKQLP HHHHHCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure MMQGQRVDVETTGIASGTTPPGVVIPLGGFPVLSTTQEAFALDLFHALAARQPRRVFFAN CCCCCEECEEECCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEC TNFIVQCQALRTRMREPSVRIVNDGIGMDLAARLIHGRRFAGNLNGTDLIPYLCRESAQP CCEEEEEHHHHHHHCCCCEEEEECCCCHHHHHHHHHCHHHCCCCCCCHHHHHHHHCCCCC LKFFLLGGRPGVGKTAAATLTGTLGQQVVGMCDGYGEFAAAGEGLAERINRSGADVLLVA EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEE FGNPLQERWILDHSHALSVPLVFGVGALLDFLSGTAKRAPEWVRGLHMEWMYRLLNEPRR CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHH LLKRYSWDLLVFFRTCLRAGKQLP HHHHHCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-N-acetyl-D-mannosaminuronic-acid; undecaprenyl-N-acetyl-alpha-D-glucosaminyl-pyrophosphate [C]
Specific reaction: UDP-N-acetyl-D-mannosaminuronic-acid + undecaprenyl-N-acetyl-alpha-D-glucosaminyl-pyrophosphate = C55-PP-GlcNAc-ManNAcA + UDP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA