| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78048321
Identifier: 78048321
GI number: 78048321
Start: 3145284
End: 3146540
Strand: Reverse
Name: 78048321
Synonym: XCV2765
Alternate gene names: NA
Gene position: 3146540-3145284 (Counterclockwise)
Preceding gene: 78048322
Following gene: 78048315
Centisome position: 60.76
GC content: 67.78
Gene sequence:
>1257_bases ATGCGCATTGATCTGATCGCACCGCCCTACAGCGGCCATTTGCATCCCATCCTGGCGATCGCGCAACAGCTCACCGCGCA GCACGAGGTCTGCGTCATCAGCACGCCTGCTGCGCGGGCGCACATCGAGGCATGTGGGCTCGCCGCTGCCAGCGTGCTGG ATGCGCATGCCGATCGCTTGCTGCTTTCCATCGCCAACCCGCCGCATGCAGTGGGCCACAACCCCGTGCGCCTGCGTCGG CAGTTGCACAACGCACTCAGGCTCATGGCGCAGCTCGGCGAAGCGCTGCAGCAGCGCTGGCGCGCGCGGCGGCCGGATCT GGTGATCGTCGACTTCACCCTGCCCAGCGCAGGACTGGCCGCACAGACGATGGGCATTGCCTGGTGGACCAGCATGCCGT CGCCATGCGTGATCGAAACCACGGATGGGCCGCCCGCATACTTTGGCGGGTTGCTGCCTGCGACCACACCCTTGCAGCGT GTCTGGCATGCAGCGGCGCGCCGGCTCACACGTGGCTTCAAACGGACCCTGCACCTTTGCTATCGGCGCCAGATGCGCGC GTGCGGGTTGCCGGCAATCTATCGACGCGATCGCAGCGAGGCGGTGTATTCGCCGCAGTGCATCCTGGCCCTGGGAGTCC CGTCGTTCGAGCTGGCGCAACGCTGGCCGACGGCCGTGCGCTTTGTCGGGCCGCAGTTGTGCACGCCGCCTTCGTCGGTG CCGGCGCCCACCTTCGTCGACGGTCGCCGGCATGTGCTGGTGACGCTGGGCACGCATCTGCAATGGGTCAAGCAGCGCAT GGATGGCGTGCTGCGTGCGCTGGCGCCGCAGTTCCCGGAGGTGGTCTTCCATTTCAGCGACGGCGACACCGGCGCTTCGC CGCAGCCGGGGCAGGGCAACTATCAGCGGCTGCCCTATGTGGATTACGCCCAGCACCTGCACCGCTACGCCTTGGTGATC CATCACGGCGGTGCCGGCATTCTCTACGCCTGCCTCGCCGCGGGATTGCCGGCCATCGTCTACCCGCTGGATTACGACCA GTTCGATCACGCCGCGCGCCTGCAGGTGGCAGGTGCTGCCTGGTGGTTGCGCGATCTGGATGGCTTGCCGGCGTTGCTGC GTCAGGCGCTCGGCGCCGGCGAGGTGCCACACGGCGTGCGTCGCCTGCAGGCGGCGCTACAACTGATCCAATCGCAGGCG CGCATCGCGCAGCTGGTGGAGGGTTTCGCGCGTACTGGCGCGGTGCCGCCAGTGTAA
Upstream 100 bases:
>100_bases CCTGCGTGCGGACACATGGCGTACCTGCGCAACGCCGAGGTGCTTGCCGAGTGCCAGCGCTTTGTCGCGCAGATCGAACG AATGCGACAGGGCGCAGCGC
Downstream 100 bases:
>100_bases TGCGGCGCGCGCCACAACGAATCTGTTGGCGCGCTCAGCCTGCCGCAGCGTTCAACGCAGGCGTCTTGCTGGTCATCAGC TGCGGCCAGCGCTTGAGCAC
Product: putative glycosyltransferase
Products: NA
Alternate protein names: Glycosyl Transferase; Glycosyl Transferase Family Protein; UDP-Glucuronosyl/UDP-Glucosyltransferase; N-Glycosyltransferase
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MRIDLIAPPYSGHLHPILAIAQQLTAQHEVCVISTPAARAHIEACGLAAASVLDAHADRLLLSIANPPHAVGHNPVRLRR QLHNALRLMAQLGEALQQRWRARRPDLVIVDFTLPSAGLAAQTMGIAWWTSMPSPCVIETTDGPPAYFGGLLPATTPLQR VWHAAARRLTRGFKRTLHLCYRRQMRACGLPAIYRRDRSEAVYSPQCILALGVPSFELAQRWPTAVRFVGPQLCTPPSSV PAPTFVDGRRHVLVTLGTHLQWVKQRMDGVLRALAPQFPEVVFHFSDGDTGASPQPGQGNYQRLPYVDYAQHLHRYALVI HHGGAGILYACLAAGLPAIVYPLDYDQFDHAARLQVAGAAWWLRDLDGLPALLRQALGAGEVPHGVRRLQAALQLIQSQA RIAQLVEGFARTGAVPPV
Sequences:
>Translated_418_residues MRIDLIAPPYSGHLHPILAIAQQLTAQHEVCVISTPAARAHIEACGLAAASVLDAHADRLLLSIANPPHAVGHNPVRLRR QLHNALRLMAQLGEALQQRWRARRPDLVIVDFTLPSAGLAAQTMGIAWWTSMPSPCVIETTDGPPAYFGGLLPATTPLQR VWHAAARRLTRGFKRTLHLCYRRQMRACGLPAIYRRDRSEAVYSPQCILALGVPSFELAQRWPTAVRFVGPQLCTPPSSV PAPTFVDGRRHVLVTLGTHLQWVKQRMDGVLRALAPQFPEVVFHFSDGDTGASPQPGQGNYQRLPYVDYAQHLHRYALVI HHGGAGILYACLAAGLPAIVYPLDYDQFDHAARLQVAGAAWWLRDLDGLPALLRQALGAGEVPHGVRRLQAALQLIQSQA RIAQLVEGFARTGAVPPV >Mature_418_residues MRIDLIAPPYSGHLHPILAIAQQLTAQHEVCVISTPAARAHIEACGLAAASVLDAHADRLLLSIANPPHAVGHNPVRLRR QLHNALRLMAQLGEALQQRWRARRPDLVIVDFTLPSAGLAAQTMGIAWWTSMPSPCVIETTDGPPAYFGGLLPATTPLQR VWHAAARRLTRGFKRTLHLCYRRQMRACGLPAIYRRDRSEAVYSPQCILALGVPSFELAQRWPTAVRFVGPQLCTPPSSV PAPTFVDGRRHVLVTLGTHLQWVKQRMDGVLRALAPQFPEVVFHFSDGDTGASPQPGQGNYQRLPYVDYAQHLHRYALVI HHGGAGILYACLAAGLPAIVYPLDYDQFDHAARLQVAGAAWWLRDLDGLPALLRQALGAGEVPHGVRRLQAALQLIQSQA RIAQLVEGFARTGAVPPV
Specific function: Unknown
COG id: COG1819
COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45771; Mature: 45771
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIDLIAPPYSGHLHPILAIAQQLTAQHEVCVISTPAARAHIEACGLAAASVLDAHADRL CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHE LLSIANPPHAVGHNPVRLRRQLHNALRLMAQLGEALQQRWRARRPDLVIVDFTLPSAGLA EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHH AQTMGIAWWTSMPSPCVIETTDGPPAYFGGLLPATTPLQRVWHAAARRLTRGFKRTLHLC HHHHHHHEECCCCCCEEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH YRRQMRACGLPAIYRRDRSEAVYSPQCILALGVPSFELAQRWPTAVRFVGPQLCTPPSSV HHHHHHHCCCHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHCCHHHHHCCCCCCCCCCCC PAPTFVDGRRHVLVTLGTHLQWVKQRMDGVLRALAPQFPEVVFHFSDGDTGASPQPGQGN CCCCEECCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCC YQRLPYVDYAQHLHRYALVIHHGGAGILYACLAAGLPAIVYPLDYDQFDHAARLQVAGAA CCCCCHHHHHHHHHHHEEEEEECCHHHHHHHHHCCCCEEEEECCCCCCCCHHHEEHHHHH WWLRDLDGLPALLRQALGAGEVPHGVRRLQAALQLIQSQARIAQLVEGFARTGAVPPV HHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRIDLIAPPYSGHLHPILAIAQQLTAQHEVCVISTPAARAHIEACGLAAASVLDAHADRL CEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHE LLSIANPPHAVGHNPVRLRRQLHNALRLMAQLGEALQQRWRARRPDLVIVDFTLPSAGLA EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHH AQTMGIAWWTSMPSPCVIETTDGPPAYFGGLLPATTPLQRVWHAAARRLTRGFKRTLHLC HHHHHHHEECCCCCCEEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH YRRQMRACGLPAIYRRDRSEAVYSPQCILALGVPSFELAQRWPTAVRFVGPQLCTPPSSV HHHHHHHCCCHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHCCHHHHHCCCCCCCCCCCC PAPTFVDGRRHVLVTLGTHLQWVKQRMDGVLRALAPQFPEVVFHFSDGDTGASPQPGQGN CCCCEECCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCC YQRLPYVDYAQHLHRYALVIHHGGAGILYACLAAGLPAIVYPLDYDQFDHAARLQVAGAA CCCCCHHHHHHHHHHHEEEEEECCHHHHHHHHHCCCCEEEEECCCCCCCCHHHEEHHHHH WWLRDLDGLPALLRQALGAGEVPHGVRRLQAALQLIQSQARIAQLVEGFARTGAVPPV HHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA