Click here to switch to the map view.

The map label for this gene is 78048292

Identifier: 78048292

GI number: 78048292

Start: 3112165

End: 3113799

Strand: Reverse

Name: 78048292

Synonym: XCV2736

Alternate gene names: NA

Gene position: 3113799-3112165 (Counterclockwise)

Preceding gene: 78048293

Following gene: 78048291

Centisome position: 60.13

GC content: 65.44

Gene sequence:

>1635_bases
ATGATGCGTTTGTCTGCTCGATTCAAGCCGCAGCGGCGCAGCCGGGTGGCGGGTCTGCTGTGGTCGCTGGCATTGCTGGC
TGGCAACGCACCGTTGCTTGCGGCCGCCGAAGAACTGCCGCGCTTCGTCACCAAGGATGGCCGCCACGCGCTGTTTGTCG
ATGGTGCGCCGTATACCATCCTGGCCGCGCAGTTGCATAACTCCAGCGCATGGCCGGCGGTATTACCCAAGGCATTGGAC
GATGTGGTTGCCCTGCACGCCAATACGGTGGAAGCGCCTGTGTACTGGGAGCAGTTCGAGCCGGCACAGGGCCGCTTCGA
CACGACCAATGTGGACGCGCTGATTGCCGGCGCCCGCAAGCGTGGCCTGCGTGTCGCGCTCCTGTGGTTCGGTAGCTGGA
AGAACGGCCAGATGCATTACGTGCCCGAATGGATCAAGCGCGACGAGGCGACGTACCCGCGCATGCGCGATGCCAATGGC
GAGCCGGTGGATGTGTTGTCGCCCCATGTGGCCGCCAACATGCAGGCCGATGCGTGGGCGTTCACCGCGTTGATGCAGCA
TCTGCGCAAGGTGGATGGCGACCGCCACACGGTGATTCTGGTGCAGGTGGAAAACGAGCCCGGCGCGATCGGCACCGTGC
GCGATCACGGCCCGGCAGGCGAGGCAGCGTTTGCGCAACCGGTACCAGCCGCGATTGCGCGCGCACTCGGCAAACCGCAG
GGCAGCTGGCAGCAACTGTTCGGCGCCGAAGCTGCCGAAGCGTTCAACGCATATGCAACCGCTGCGTATATCGAACAGGT
GGCCGCCGCGGGCAAGCGTGTCTATCCGCTGCCGTTCTACGTCAACACCTGGCTGCGCTACAAGGGCAAGCGCTATCCGG
GCATGGACTATCCGTCCGGCGGCGCGACGGTGAACGTATTCGCGTTGTGGCGCGCGGCCACGCCGTCGATCGATTTCATT
GGTACCGACATATACACCAGCGACTACACCGAATACACCAAGGTCGTCGGCCAATACGCGCGGCCCGATAATCCGGCCTG
GGTCTCGGAAACCGGCTTCGAAGCTGCCACTGCGCCGTATCTGTTCCATGTGCTGGGGCAGGGCGGGGTCGGCTTTTCGG
TGTTCGGCATGGATGGCAACCCCGACAGCGAGGCCAACCGCGCGGCGGTTGCAGCCCATGCGGCCAACTTCACGCTGCTG
GCGCCGATGCAGCGGATCCTGGCGCAGGCCGCCTTCGACGGCCGCCTGCAGGCGGTGGCCGAGCAGCCCGGCGCACCGCA
GCGCACGCTGCGCTTCGGCGAGTGGGAGGCCAAGGTGTCGTTCGGTGCGCCCATGTGGGGCGATGCGCCGCCCATCGGCA
ACGACGACCACGCCGGCCGGCTGCTGGTGGCCCAACTGGGGCCGGAGGAATTCCTGGTGACCGGTATGGCTGCGCGCATT
GGATTTTTTCGCGACGCGGCCGATACCCGTCATGGACAACTGTTGCGGGTGGAGCAGGGACGGTATGTCGACGGGCGCTG
GCAGATGGAAAGGCAGCTCAACGGCGACCAGACCGACTACGGCCTCAACTTCGGGCGTGTGGATGCAACCGGCAATGTGC
CTGTGGTGTTGCGGGTGCGGGTAGGGACTTACTGA

Upstream 100 bases:

>100_bases
GGCCGATCGATTACGTGCAACGTCGACAGTACGACTTCTTCGTGCGCCATCTGCGCAACGAGCCCACGCCGCACTGGAAT
TCCCTGCCATCGGAGGCGCA

Downstream 100 bases:

>100_bases
GCCTTGCTGACCGTGTCGCTGCTGCCTTCGGCCTGTTGTCTGCAATGGGTTGAGCCTTGTTCGAATCTTCACCGCCACGC
CGGAGCCACCATGAGCATCA

Product: putative secreted protein

Products: NA

Alternate protein names: Beta-Galactosidase; DNA Recombination Protein RuvA; Glycoside Hydrolase Family Protein; Beta-Galactosidase Family; Mannonate Dehydratase; Glycosyl Hydrolase Family

Number of amino acids: Translated: 544; Mature: 544

Protein sequence:

>544_residues
MMRLSARFKPQRRSRVAGLLWSLALLAGNAPLLAAAEELPRFVTKDGRHALFVDGAPYTILAAQLHNSSAWPAVLPKALD
DVVALHANTVEAPVYWEQFEPAQGRFDTTNVDALIAGARKRGLRVALLWFGSWKNGQMHYVPEWIKRDEATYPRMRDANG
EPVDVLSPHVAANMQADAWAFTALMQHLRKVDGDRHTVILVQVENEPGAIGTVRDHGPAGEAAFAQPVPAAIARALGKPQ
GSWQQLFGAEAAEAFNAYATAAYIEQVAAAGKRVYPLPFYVNTWLRYKGKRYPGMDYPSGGATVNVFALWRAATPSIDFI
GTDIYTSDYTEYTKVVGQYARPDNPAWVSETGFEAATAPYLFHVLGQGGVGFSVFGMDGNPDSEANRAAVAAHAANFTLL
APMQRILAQAAFDGRLQAVAEQPGAPQRTLRFGEWEAKVSFGAPMWGDAPPIGNDDHAGRLLVAQLGPEEFLVTGMAARI
GFFRDAADTRHGQLLRVEQGRYVDGRWQMERQLNGDQTDYGLNFGRVDATGNVPVVLRVRVGTY

Sequences:

>Translated_544_residues
MMRLSARFKPQRRSRVAGLLWSLALLAGNAPLLAAAEELPRFVTKDGRHALFVDGAPYTILAAQLHNSSAWPAVLPKALD
DVVALHANTVEAPVYWEQFEPAQGRFDTTNVDALIAGARKRGLRVALLWFGSWKNGQMHYVPEWIKRDEATYPRMRDANG
EPVDVLSPHVAANMQADAWAFTALMQHLRKVDGDRHTVILVQVENEPGAIGTVRDHGPAGEAAFAQPVPAAIARALGKPQ
GSWQQLFGAEAAEAFNAYATAAYIEQVAAAGKRVYPLPFYVNTWLRYKGKRYPGMDYPSGGATVNVFALWRAATPSIDFI
GTDIYTSDYTEYTKVVGQYARPDNPAWVSETGFEAATAPYLFHVLGQGGVGFSVFGMDGNPDSEANRAAVAAHAANFTLL
APMQRILAQAAFDGRLQAVAEQPGAPQRTLRFGEWEAKVSFGAPMWGDAPPIGNDDHAGRLLVAQLGPEEFLVTGMAARI
GFFRDAADTRHGQLLRVEQGRYVDGRWQMERQLNGDQTDYGLNFGRVDATGNVPVVLRVRVGTY
>Mature_544_residues
MMRLSARFKPQRRSRVAGLLWSLALLAGNAPLLAAAEELPRFVTKDGRHALFVDGAPYTILAAQLHNSSAWPAVLPKALD
DVVALHANTVEAPVYWEQFEPAQGRFDTTNVDALIAGARKRGLRVALLWFGSWKNGQMHYVPEWIKRDEATYPRMRDANG
EPVDVLSPHVAANMQADAWAFTALMQHLRKVDGDRHTVILVQVENEPGAIGTVRDHGPAGEAAFAQPVPAAIARALGKPQ
GSWQQLFGAEAAEAFNAYATAAYIEQVAAAGKRVYPLPFYVNTWLRYKGKRYPGMDYPSGGATVNVFALWRAATPSIDFI
GTDIYTSDYTEYTKVVGQYARPDNPAWVSETGFEAATAPYLFHVLGQGGVGFSVFGMDGNPDSEANRAAVAAHAANFTLL
APMQRILAQAAFDGRLQAVAEQPGAPQRTLRFGEWEAKVSFGAPMWGDAPPIGNDDHAGRLLVAQLGPEEFLVTGMAARI
GFFRDAADTRHGQLLRVEQGRYVDGRWQMERQLNGDQTDYGLNFGRVDATGNVPVVLRVRVGTY

Specific function: Unknown

COG id: COG1874

COG function: function code G; Beta-galactosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59435; Mature: 59435

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRLSARFKPQRRSRVAGLLWSLALLAGNAPLLAAAEELPRFVTKDGRHALFVDGAPYTI
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCEE
LAAQLHNSSAWPAVLPKALDDVVALHANTVEAPVYWEQFEPAQGRFDTTNVDALIAGARK
EEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHC
RGLRVALLWFGSWKNGQMHYVPEWIKRDEATYPRMRDANGEPVDVLSPHVAANMQADAWA
CCCEEEEEEEECCCCCCEEECHHHHCCCCCCCCCCCCCCCCCCHHCCCCHHCCCCCHHHH
FTALMQHLRKVDGDRHTVILVQVENEPGAIGTVRDHGPAGEAAFAQPVPAAIARALGKPQ
HHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCCCC
GSWQQLFGAEAAEAFNAYATAAYIEQVAAAGKRVYPLPFYVNTWLRYKGKRYPGMDYPSG
CHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHCCCCCCCCCCCCCC
GATVNVFALWRAATPSIDFIGTDIYTSDYTEYTKVVGQYARPDNPAWVSETGFEAATAPY
CCEEEEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
LFHVLGQGGVGFSVFGMDGNPDSEANRAAVAAHAANFTLLAPMQRILAQAAFDGRLQAVA
HHHHHCCCCCCEEEEECCCCCCCCCCHHEEEHHHCCEEHHHHHHHHHHHHHCCCHHHHHH
EQPGAPQRTLRFGEWEAKVSFGAPMWGDAPPIGNDDHAGRLLVAQLGPEEFLVTGMAARI
CCCCCCHHHEECCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHH
GFFRDAADTRHGQLLRVEQGRYVDGRWQMERQLNGDQTDYGLNFGRVDATGNVPVVLRVR
HHHHCCCCCCCCCEEEECCCCEECCHHHHHHHCCCCCCCCCCCCCEECCCCCCCEEEEEE
VGTY
ECCC
>Mature Secondary Structure
MMRLSARFKPQRRSRVAGLLWSLALLAGNAPLLAAAEELPRFVTKDGRHALFVDGAPYTI
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCEE
LAAQLHNSSAWPAVLPKALDDVVALHANTVEAPVYWEQFEPAQGRFDTTNVDALIAGARK
EEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHC
RGLRVALLWFGSWKNGQMHYVPEWIKRDEATYPRMRDANGEPVDVLSPHVAANMQADAWA
CCCEEEEEEEECCCCCCEEECHHHHCCCCCCCCCCCCCCCCCCHHCCCCHHCCCCCHHHH
FTALMQHLRKVDGDRHTVILVQVENEPGAIGTVRDHGPAGEAAFAQPVPAAIARALGKPQ
HHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCCCC
GSWQQLFGAEAAEAFNAYATAAYIEQVAAAGKRVYPLPFYVNTWLRYKGKRYPGMDYPSG
CHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHCCCCCCCCCCCCCC
GATVNVFALWRAATPSIDFIGTDIYTSDYTEYTKVVGQYARPDNPAWVSETGFEAATAPY
CCEEEEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
LFHVLGQGGVGFSVFGMDGNPDSEANRAAVAAHAANFTLLAPMQRILAQAAFDGRLQAVA
HHHHHCCCCCCEEEEECCCCCCCCCCHHEEEHHHCCEEHHHHHHHHHHHHHCCCHHHHHH
EQPGAPQRTLRFGEWEAKVSFGAPMWGDAPPIGNDDHAGRLLVAQLGPEEFLVTGMAARI
CCCCCCHHHEECCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHH
GFFRDAADTRHGQLLRVEQGRYVDGRWQMERQLNGDQTDYGLNFGRVDATGNVPVVLRVR
HHHHCCCCCCCCCEEEECCCCEECCHHHHHHHCCCCCCCCCCCCCEECCCCCCCEEEEEE
VGTY
ECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA