Click here to switch to the map view.

The map label for this gene is 78048287

Identifier: 78048287

GI number: 78048287

Start: 3106727

End: 3106978

Strand: Reverse

Name: 78048287

Synonym: XCV2731

Alternate gene names: NA

Gene position: 3106978-3106727 (Counterclockwise)

Preceding gene: 78048288

Following gene: 78048286

Centisome position: 60.0

GC content: 58.33

Gene sequence:

>252_bases
GTGGTCGATCACAGAGACCAGGGCACATCGCATGATCGTGCCGAGATGTCGCTGTTTGGGCAATGCAGGCATGCCCGAAA
GCAGGCGCAAGCACGCGATTTTCCGCATGCGTCCCGCCTAAATTCGTCAAGACGGCGCAGTGGCGTTGTCGCAAGATTTT
TTTCACGTAACGCGTGTGCCAAGCATGCGCTCTCAGGGGAGAGCGGTGTCGTTGCAGTTGCCGTCCTTGCATGCGGAGAG
ACCTGCCGTTGA

Upstream 100 bases:

>100_bases
ACGGCGATGCGATGATCAGGCGTTGCCGTTGTTGCCGTTGTTGCAGTGTTGCTGGACAGAGCGCACCGCAGTGCCGCTTC
GCTGTTCGCATGCAGGTGCT

Downstream 100 bases:

>100_bases
GACGGCAGGCCGGTGCAGTCTCTGTCGTGATCGTTCCCTCCATCTGTGCGCCGCGGCGGTGCGGCTTGGCCGTGCGCGGT
CATGCAGGAAGGTGGGCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MVDHRDQGTSHDRAEMSLFGQCRHARKQAQARDFPHASRLNSSRRRSGVVARFFSRNACAKHALSGESGVVAVAVLACGE
TCR

Sequences:

>Translated_83_residues
MVDHRDQGTSHDRAEMSLFGQCRHARKQAQARDFPHASRLNSSRRRSGVVARFFSRNACAKHALSGESGVVAVAVLACGE
TCR
>Mature_83_residues
MVDHRDQGTSHDRAEMSLFGQCRHARKQAQARDFPHASRLNSSRRRSGVVARFFSRNACAKHALSGESGVVAVAVLACGE
TCR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9111; Mature: 9111

Theoretical pI: Translated: 11.20; Mature: 11.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDHRDQGTSHDRAEMSLFGQCRHARKQAQARDFPHASRLNSSRRRSGVVARFFSRNACA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCHHHHHHHHHHHHHHHHHHH
KHALSGESGVVAVAVLACGETCR
HHHCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MVDHRDQGTSHDRAEMSLFGQCRHARKQAQARDFPHASRLNSSRRRSGVVARFFSRNACA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCHHHHHHHHHHHHHHHHHHH
KHALSGESGVVAVAVLACGETCR
HHHCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA