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The map label for this gene is xsa [H]

Identifier: 78048284

GI number: 78048284

Start: 3097443

End: 3099029

Strand: Reverse

Name: xsa [H]

Synonym: XCV2728

Alternate gene names: 78048284

Gene position: 3099029-3097443 (Counterclockwise)

Preceding gene: 78048285

Following gene: 78048283

Centisome position: 59.84

GC content: 65.66

Gene sequence:

>1587_bases
ATGACGCGTACGTTCTCACGGTCGCTGGTGCTGACGTGCGGGTTGTTGCTGGCCAGCGCTCCGGCCTGTGCCATGCAGCC
GCCGCAGGGAACGCGGCTGCATGCGCCGGGCAATCCCATCCTCGCCGATGGCAGCGAATATTCCGCCGACCCTGCGCCGC
TGGTGGCCGATGGCAAGCTGTACATCATTGCCGGCCGCGACACCGCGGCTCCCAATCTCAATGCGTTCGTCATGCCTGGC
TGGCAACTGTTCGTCAGCAGCGATCCGGCCAGCGGCGACTGGATCCACTACCGCGATCTGCTGCGACCCAAGCAGGTCTT
TGCCTGGACAGACAAGCGCTATGCCTACGCGTCGCAGATCGTGCAGGGCCCGGATGGGCGCTATTACCTGTATGCACCAG
TGCAGCAGCGCGATTCGCCCAATGCCGATCCATTCGCCATCGGCGTAGCGGTGGCCGACAGTCCGCTTGGCCCGTGGACC
GATGCGCATCCGCAAGGTCCGGTGGTCTCGCAGTCGGTGCCGGGCCGCAACGATATCCAGAACATCGACCCGACCGTGTT
GGTCGACGATGACGGACGGGTGTATCTGTATTGGGGTACCTTCGGCGCGTTGTACGGCGTGGAGCTGCAGCGCGACATGG
TCACTTTCAAGGGCACGCCGGTCCTGGTAGACACGCTGGACGGGTATTTCGAAGCGCCCTGGCTATTCAAGCACAAGGGC
ACCTACTACCTGGCATATGCGGCCAACAACGCCGGACGTCTTTCGCCATGCACGCCCACGCTGTATCACGCCTGCATCGC
CTACGCGAGCGCGCCCACTCCGCTAGGGCCATGGACGTACCGCGGCATCGTGTTGCCGCCGGTGTCCTCGACCACCTCGC
ATCCGGGCATCGTCGAATTTCAGCGGCAGTGGTATCTGGTGTATCACACCGCCGACGCAACGGGCGGCGGGCATTTTCGC
CGCAGCGTGGCGATCGACCGGCTGGAATGGGACGAAAGCACGCAGCCGGCCAGCATCCGCACCGTGGTGCCGACACGGCG
TCCAACGCCTCCCGCGCCGCCCATGCGCAATCAGGCGTCATCGGCCTACGCCACCGCGTCCAACGGTCCGGACATTCCGG
TGCAGTACTGGATTGCCGCGCTCAACGACGGCGTGGTCAAGGCCAATCCATTGCCACCGGAGATGTGGGCCAGCTGGACG
GACAACAATCCACCGCAGCAATGGCTGCAGTACAGCTGGGCGCAACCGATCACCGTGGACCGCACGCGCATCGTGTTCTG
GGCCGACCACCCGGCCGGTGCCGACGTCGGCGTGGCACCGCCAGCGCGTTGGCATCTGGAATACCGGAACGCTGGGCGAT
GGCAGCCCGTGCAGCCCCGCGATGGGTATGGCACGCGTCCCGATCACGAAGAAGCGGTGTCGTTCGCGCCGGTGACAACG
CGCTGCGTGCGTGTGGTCATGGACGCCTCTGGCAACGCGGCCAGCTATGCCGCGCTGGCAGTGCAGGAATGGGAAGTGCT
GGCGCCACAGCCACAACGCCTGCCCTCTGCCACGGCCGCTGACAGCCAGCGTTGCGATGCGCCGTGA

Upstream 100 bases:

>100_bases
CACAGCCCGGCGAACTCCAGCTCACCGGCATGGCGCAAGGGCGTGCACCCACCGGTAACGTGTCGGTGCCGCTGGGGGTG
CAGATCAAGGCGGCCACGCC

Downstream 100 bases:

>100_bases
AGCAGCCGACAAAGTGCCGCATGCGGCAGTCGAACGTTGGCTGACGGTGCGCAGGCAGTGGAGTGCACCGGTGGGGATGA
CACATCGGCTTTTGCGTACT

Product: putative xylosidase precursor

Products: NA

Alternate protein names: Beta-xylosidase; 1,4-beta-D-xylan xylohydrolase; Xylan 1,4-beta-xylosidase; Alpha-N-arabinofuranosidase; Arabinosidase [H]

Number of amino acids: Translated: 528; Mature: 527

Protein sequence:

>528_residues
MTRTFSRSLVLTCGLLLASAPACAMQPPQGTRLHAPGNPILADGSEYSADPAPLVADGKLYIIAGRDTAAPNLNAFVMPG
WQLFVSSDPASGDWIHYRDLLRPKQVFAWTDKRYAYASQIVQGPDGRYYLYAPVQQRDSPNADPFAIGVAVADSPLGPWT
DAHPQGPVVSQSVPGRNDIQNIDPTVLVDDDGRVYLYWGTFGALYGVELQRDMVTFKGTPVLVDTLDGYFEAPWLFKHKG
TYYLAYAANNAGRLSPCTPTLYHACIAYASAPTPLGPWTYRGIVLPPVSSTTSHPGIVEFQRQWYLVYHTADATGGGHFR
RSVAIDRLEWDESTQPASIRTVVPTRRPTPPAPPMRNQASSAYATASNGPDIPVQYWIAALNDGVVKANPLPPEMWASWT
DNNPPQQWLQYSWAQPITVDRTRIVFWADHPAGADVGVAPPARWHLEYRNAGRWQPVQPRDGYGTRPDHEEAVSFAPVTT
RCVRVVMDASGNAASYAALAVQEWEVLAPQPQRLPSATAADSQRCDAP

Sequences:

>Translated_528_residues
MTRTFSRSLVLTCGLLLASAPACAMQPPQGTRLHAPGNPILADGSEYSADPAPLVADGKLYIIAGRDTAAPNLNAFVMPG
WQLFVSSDPASGDWIHYRDLLRPKQVFAWTDKRYAYASQIVQGPDGRYYLYAPVQQRDSPNADPFAIGVAVADSPLGPWT
DAHPQGPVVSQSVPGRNDIQNIDPTVLVDDDGRVYLYWGTFGALYGVELQRDMVTFKGTPVLVDTLDGYFEAPWLFKHKG
TYYLAYAANNAGRLSPCTPTLYHACIAYASAPTPLGPWTYRGIVLPPVSSTTSHPGIVEFQRQWYLVYHTADATGGGHFR
RSVAIDRLEWDESTQPASIRTVVPTRRPTPPAPPMRNQASSAYATASNGPDIPVQYWIAALNDGVVKANPLPPEMWASWT
DNNPPQQWLQYSWAQPITVDRTRIVFWADHPAGADVGVAPPARWHLEYRNAGRWQPVQPRDGYGTRPDHEEAVSFAPVTT
RCVRVVMDASGNAASYAALAVQEWEVLAPQPQRLPSATAADSQRCDAP
>Mature_527_residues
TRTFSRSLVLTCGLLLASAPACAMQPPQGTRLHAPGNPILADGSEYSADPAPLVADGKLYIIAGRDTAAPNLNAFVMPGW
QLFVSSDPASGDWIHYRDLLRPKQVFAWTDKRYAYASQIVQGPDGRYYLYAPVQQRDSPNADPFAIGVAVADSPLGPWTD
AHPQGPVVSQSVPGRNDIQNIDPTVLVDDDGRVYLYWGTFGALYGVELQRDMVTFKGTPVLVDTLDGYFEAPWLFKHKGT
YYLAYAANNAGRLSPCTPTLYHACIAYASAPTPLGPWTYRGIVLPPVSSTTSHPGIVEFQRQWYLVYHTADATGGGHFRR
SVAIDRLEWDESTQPASIRTVVPTRRPTPPAPPMRNQASSAYATASNGPDIPVQYWIAALNDGVVKANPLPPEMWASWTD
NNPPQQWLQYSWAQPITVDRTRIVFWADHPAGADVGVAPPARWHLEYRNAGRWQPVQPRDGYGTRPDHEEAVSFAPVTTR
CVRVVMDASGNAASYAALAVQEWEVLAPQPQRLPSATAADSQRCDAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 43 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006710 [H]

Pfam domain/function: PF04616 Glyco_hydro_43 [H]

EC number: =3.2.1.37; =3.2.1.55 [H]

Molecular weight: Translated: 57864; Mature: 57733

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTFSRSLVLTCGLLLASAPACAMQPPQGTRLHAPGNPILADGSEYSADPAPLVADGKL
CCCCCHHHHHHHHHHHHHCCCHHCCCCCCCCEEECCCCCEEECCCCCCCCCCCEEECCEE
YIIAGRDTAAPNLNAFVMPGWQLFVSSDPASGDWIHYRDLLRPKQVFAWTDKRYAYASQI
EEEECCCCCCCCCCEEEECCEEEEEECCCCCCCEEHHHHHCCCCCEEEECCCHHHHHHHH
VQGPDGRYYLYAPVQQRDSPNADPFAIGVAVADSPLGPWTDAHPQGPVVSQSVPGRNDIQ
HCCCCCCEEEEECHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
NIDPTVLVDDDGRVYLYWGTFGALYGVELQRDMVTFKGTPVLVDTLDGYFEAPWLFKHKG
CCCCEEEECCCCEEEEEECCCCCEEEEEEECEEEEECCCEEEEECCCCCCCCCEEEEECC
TYYLAYAANNAGRLSPCTPTLYHACIAYASAPTPLGPWTYRGIVLPPVSSTTSHPGIVEF
CEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCEEECCCCCCCCCCCEEEE
QRQWYLVYHTADATGGGHFRRSVAIDRLEWDESTQPASIRTVVPTRRPTPPAPPMRNQAS
EEEEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
SAYATASNGPDIPVQYWIAALNDGVVKANPLPPEMWASWTDNNPPQQWLQYSWAQPITVD
CCEEECCCCCCCCHHHHEEHHCCCEEECCCCCHHHHCCCCCCCCHHHHHHHCCCCCEEEC
RTRIVFWADHPAGADVGVAPPARWHLEYRNAGRWQPVQPRDGYGTRPDHEEAVSFAPVTT
CEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHEEECCHHH
RCVRVVMDASGNAASYAALAVQEWEVLAPQPQRLPSATAADSQRCDAP
HEEEEEECCCCCCCEEEEEEEECCCEECCCHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TRTFSRSLVLTCGLLLASAPACAMQPPQGTRLHAPGNPILADGSEYSADPAPLVADGKL
CCCCHHHHHHHHHHHHHCCCHHCCCCCCCCEEECCCCCEEECCCCCCCCCCCEEECCEE
YIIAGRDTAAPNLNAFVMPGWQLFVSSDPASGDWIHYRDLLRPKQVFAWTDKRYAYASQI
EEEECCCCCCCCCCEEEECCEEEEEECCCCCCCEEHHHHHCCCCCEEEECCCHHHHHHHH
VQGPDGRYYLYAPVQQRDSPNADPFAIGVAVADSPLGPWTDAHPQGPVVSQSVPGRNDIQ
HCCCCCCEEEEECHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
NIDPTVLVDDDGRVYLYWGTFGALYGVELQRDMVTFKGTPVLVDTLDGYFEAPWLFKHKG
CCCCEEEECCCCEEEEEECCCCCEEEEEEECEEEEECCCEEEEECCCCCCCCCEEEEECC
TYYLAYAANNAGRLSPCTPTLYHACIAYASAPTPLGPWTYRGIVLPPVSSTTSHPGIVEF
CEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCEEECCCCCCCCCCCEEEE
QRQWYLVYHTADATGGGHFRRSVAIDRLEWDESTQPASIRTVVPTRRPTPPAPPMRNQAS
EEEEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
SAYATASNGPDIPVQYWIAALNDGVVKANPLPPEMWASWTDNNPPQQWLQYSWAQPITVD
CCEEECCCCCCCCHHHHEEHHCCCEEECCCCCHHHHCCCCCCCCHHHHHHHCCCCCEEEC
RTRIVFWADHPAGADVGVAPPARWHLEYRNAGRWQPVQPRDGYGTRPDHEEAVSFAPVTT
CEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHEEECCHHH
RCVRVVMDASGNAASYAALAVQEWEVLAPQPQRLPSATAADSQRCDAP
HEEEEEECCCCCCCEEEEEEEECCCEECCCHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7766665 [H]