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The map label for this gene is yajC [H]

Identifier: 78048250

GI number: 78048250

Start: 3051168

End: 3051521

Strand: Reverse

Name: yajC [H]

Synonym: XCV2694

Alternate gene names: 78048250

Gene position: 3051521-3051168 (Counterclockwise)

Preceding gene: 78048251

Following gene: 78048249

Centisome position: 58.93

GC content: 63.56

Gene sequence:

>354_bases
ATGAATCTGCTCGATTTCCTGATCCCCGCTGCCCAGGCGCAGGCCGCTGGCGGCGCGCCGGCACCCGGCCCGATGGGAGG
CCTGTCTACCTTCGCGCTGCCGATCATCCTGATCGCCGTGATGTACTTCCTGATGATCCGCCCGCAGATGAAGCGTCAGA
AAGAACACAAGGCGCTGCTGGACAAGCTGGCGCGCGGCGATGAAGTGATCACCTCCGGCGGCGTTGCGGGTGTGATCACC
GACATCGGCGACAACTTCATCAGCGTGGAAGTGGCCGATAACGTGCGTATCCGCGTGCAGAAGAGCGCCGTGGGCCATGT
GCTGCCGAAGGGCACGCTGAAGTCGGCGAGCTAA

Upstream 100 bases:

>100_bases
GTGGAACCTGCGTGGCATAATTCCCGGCTGTTCCGCCCCGGCGGTACCTGAATAGCGAGCGGGCCCATGGGCCCGCTGGC
ACCAAACTAGGATGCACTGA

Downstream 100 bases:

>100_bases
ACGCGTCTTGCAACGGCTGCGCCGCTATCAGGCAGGCGCAGTCGTCAGGTGGAACCGGAGGTTGTGACCCACCGGTTCCG
CCGTACCGCCCGTATCCATC

Product: preprotein translocase subunit YajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MNLLDFLIPAAQAQAAGGAPAPGPMGGLSTFALPIILIAVMYFLMIRPQMKRQKEHKALLDKLARGDEVITSGGVAGVIT
DIGDNFISVEVADNVRIRVQKSAVGHVLPKGTLKSAS

Sequences:

>Translated_117_residues
MNLLDFLIPAAQAQAAGGAPAPGPMGGLSTFALPIILIAVMYFLMIRPQMKRQKEHKALLDKLARGDEVITSGGVAGVIT
DIGDNFISVEVADNVRIRVQKSAVGHVLPKGTLKSAS
>Mature_117_residues
MNLLDFLIPAAQAQAAGGAPAPGPMGGLSTFALPIILIAVMYFLMIRPQMKRQKEHKALLDKLARGDEVITSGGVAGVIT
DIGDNFISVEVADNVRIRVQKSAVGHVLPKGTLKSAS

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=114, Percent_Identity=41.2280701754386, Blast_Score=92, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 12278; Mature: 12278

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLDFLIPAAQAQAAGGAPAPGPMGGLSTFALPIILIAVMYFLMIRPQMKRQKEHKALL
CCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
DKLARGDEVITSGGVAGVITDIGDNFISVEVADNVRIRVQKSAVGHVLPKGTLKSAS
HHHHCCCCEEECCCCHHHHHHCCCCEEEEEECCCEEEEEECCHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNLLDFLIPAAQAQAAGGAPAPGPMGGLSTFALPIILIAVMYFLMIRPQMKRQKEHKALL
CCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
DKLARGDEVITSGGVAGVITDIGDNFISVEVADNVRIRVQKSAVGHVLPKGTLKSAS
HHHHCCCCEEECCCCHHHHHHCCCCEEEEEECCCEEEEEECCHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]