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The map label for this gene is yedY [H]

Identifier: 78047244

GI number: 78047244

Start: 1902237

End: 1903205

Strand: Reverse

Name: yedY [H]

Synonym: XCV1688

Alternate gene names: 78047244

Gene position: 1903205-1902237 (Counterclockwise)

Preceding gene: 78047248

Following gene: 78047243

Centisome position: 36.75

GC content: 63.57

Gene sequence:

>969_bases
ATGTCGTTTCGCGATGCTTTCAACTTGCCGTCCAGCGAGATCACCGATGAGGCCGTTTACCGCGACCGCCGCCGGCTGCT
GCAGTTATTTGCGTTGACCCCCGCGCTGGGCGTGGCCGGATGTGCCGAAGCCGACCCTCCCCCGCCTCCCAAGACCGTGG
TGACGCCGGCGCAGGCGCGCAGCGGATTTCGCACGGCCGAGGAATTGACCCGGCTGGAAGACGTCACCAGCTACAACAAC
TTCTACGAGTTCGGGACCGACAAGACCGATCCGTCCAAGGCGGCCAAGACCCTGAAGCTGTCGCCTTGGACAGTGAAGGT
GGTCGGCGAATGCGAGAAGCCCGGCAGCCTGTCGCTGGATGAGCTGCTCAAGGGCATCGCGCCGGAAGAACGCATCTACC
GGCTGCGCTGCGTGGAAGGCTGGTCGATGGTGATCCCGTGGACGGGCGTGCCGCTGGGCGAGGTACTCAAGCGCTTCGCG
CCGACCTCCAAGGCCAAGTACGTGGCATTCACCACCCTGGCCGACCCGCAGCAGATGCCGGGCGTGCGCTACCGCTCGAT
CAACTGGCCGTACCGCGAAGGCTTGCGCATCGACGAGGCGATGCATCCGCTGACCCTGCTGGCCACCGGTCTGTACGGCA
AGCCGCTGCCGCAGCAGAACGGCGCGCCGTTGCGCCTGGTGGTGCCGTGGAAGTACGGCTTCAAGAGCATCAAATCGATC
GTGGAAATCCGTTTCGTCGAAAAAATGCCCGAGACCGCCTGGCACGATCTGCAACCGTCCGAATACGGCTTCTTTTCCAA
CGTCAACCCGGCAGTGGACCACCCGCGCTGGAGCCAGAAGACCGAACGCCGCATCGCCGGCACCGCCAGCAAGCTGTTTG
CCGAGCGCATCGCCACAAAGCCCTTCAACGGATATGCCGATCAGGTCGCTTCGCTGTATGCAGGCATGGATCTGAAGAAG
TGGTTCTAG

Upstream 100 bases:

>100_bases
GCATCCTTTTGACTGAGCCTGACGTAACGTAGACAGGTACCCAGGCGAACTTTTGTCTTGGTTCGTTACTCTCACGCTGC
AGCCACTGCCGGAGCCTGCC

Downstream 100 bases:

>100_bases
GCAACACACAATCTGACATCGACCCGGCGTAGGAGCGCACCCGGGCGCGACGGGCATGACCACCAAAGCCAGTCGCGCCC
GGGTGCGCTCCTACGCTTCA

Product: putative sulfite oxidase subunit YedY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MSFRDAFNLPSSEITDEAVYRDRRRLLQLFALTPALGVAGCAEADPPPPPKTVVTPAQARSGFRTAEELTRLEDVTSYNN
FYEFGTDKTDPSKAAKTLKLSPWTVKVVGECEKPGSLSLDELLKGIAPEERIYRLRCVEGWSMVIPWTGVPLGEVLKRFA
PTSKAKYVAFTTLADPQQMPGVRYRSINWPYREGLRIDEAMHPLTLLATGLYGKPLPQQNGAPLRLVVPWKYGFKSIKSI
VEIRFVEKMPETAWHDLQPSEYGFFSNVNPAVDHPRWSQKTERRIAGTASKLFAERIATKPFNGYADQVASLYAGMDLKK
WF

Sequences:

>Translated_322_residues
MSFRDAFNLPSSEITDEAVYRDRRRLLQLFALTPALGVAGCAEADPPPPPKTVVTPAQARSGFRTAEELTRLEDVTSYNN
FYEFGTDKTDPSKAAKTLKLSPWTVKVVGECEKPGSLSLDELLKGIAPEERIYRLRCVEGWSMVIPWTGVPLGEVLKRFA
PTSKAKYVAFTTLADPQQMPGVRYRSINWPYREGLRIDEAMHPLTLLATGLYGKPLPQQNGAPLRLVVPWKYGFKSIKSI
VEIRFVEKMPETAWHDLQPSEYGFFSNVNPAVDHPRWSQKTERRIAGTASKLFAERIATKPFNGYADQVASLYAGMDLKK
WF
>Mature_321_residues
SFRDAFNLPSSEITDEAVYRDRRRLLQLFALTPALGVAGCAEADPPPPPKTVVTPAQARSGFRTAEELTRLEDVTSYNNF
YEFGTDKTDPSKAAKTLKLSPWTVKVVGECEKPGSLSLDELLKGIAPEERIYRLRCVEGWSMVIPWTGVPLGEVLKRFAP
TSKAKYVAFTTLADPQQMPGVRYRSINWPYREGLRIDEAMHPLTLLATGLYGKPLPQQNGAPLRLVVPWKYGFKSIKSIV
EIRFVEKMPETAWHDLQPSEYGFFSNVNPAVDHPRWSQKTERRIAGTASKLFAERIATKPFNGYADQVASLYAGMDLKKW
F

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=329, Percent_Identity=50.7598784194529, Blast_Score=314, Evalue=6e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 36248; Mature: 36117

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFRDAFNLPSSEITDEAVYRDRRRLLQLFALTPALGVAGCAEADPPPPPKTVVTPAQAR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECHHHHH
SGFRTAEELTRLEDVTSYNNFYEFGTDKTDPSKAAKTLKLSPWTVKVVGECEKPGSLSLD
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEECCCEEEEEEECCCCCCCCCHH
ELLKGIAPEERIYRLRCVEGWSMVIPWTGVPLGEVLKRFAPTSKAKYVAFTTLADPQQMP
HHHHCCCCHHHHEEEEEECCCEEEECCCCCCHHHHHHHHCCCCCCCEEEEEECCCHHHCC
GVRYRSINWPYREGLRIDEAMHPLTLLATGLYGKPLPQQNGAPLRLVVPWKYGFKSIKSI
CCEEEECCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHH
VEIRFVEKMPETAWHDLQPSEYGFFSNVNPAVDHPRWSQKTERRIAGTASKLFAERIATK
HHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PFNGYADQVASLYAGMDLKKWF
CCCCHHHHHHHHHHCCCHHHCC
>Mature Secondary Structure 
SFRDAFNLPSSEITDEAVYRDRRRLLQLFALTPALGVAGCAEADPPPPPKTVVTPAQAR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECHHHHH
SGFRTAEELTRLEDVTSYNNFYEFGTDKTDPSKAAKTLKLSPWTVKVVGECEKPGSLSLD
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEECCCEEEEEEECCCCCCCCCHH
ELLKGIAPEERIYRLRCVEGWSMVIPWTGVPLGEVLKRFAPTSKAKYVAFTTLADPQQMP
HHHHCCCCHHHHEEEEEECCCEEEECCCCCCHHHHHHHHCCCCCCCEEEEEECCCHHHCC
GVRYRSINWPYREGLRIDEAMHPLTLLATGLYGKPLPQQNGAPLRLVVPWKYGFKSIKSI
CCEEEECCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHH
VEIRFVEKMPETAWHDLQPSEYGFFSNVNPAVDHPRWSQKTERRIAGTASKLFAERIATK
HHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PFNGYADQVASLYAGMDLKKWF
CCCCHHHHHHHHHHCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]