Click here to switch to the map view.

The map label for this gene is 78047240

Identifier: 78047240

GI number: 78047240

Start: 1899470

End: 1900030

Strand: Reverse

Name: 78047240

Synonym: XCV1684

Alternate gene names: NA

Gene position: 1900030-1899470 (Counterclockwise)

Preceding gene: 78047241

Following gene: 78047239

Centisome position: 36.69

GC content: 67.38

Gene sequence:

>561_bases
ATGACGACCGGATACGATCAGAACGGTAACCGCGGTAACGCGGCCCAGGGCTTCCAGGCGCAGGCGGAACAGATCTCGCG
CCGGCTTGGCGAATCGGCTCAGACCGTATGGCTTGCCGGTCTGGGCGCGCTTGGGCGCGTGCAGAACGAAGGCAGCAAGC
TGTTCGACTCGTTGGTGCGCGAGGGCGCCGCCTATGAGCGCACCGGCCAGCGCAGGGCGGCCGAGAGCGTCGACGAATTG
CGCGAAGAGGTGGAAACCCAGTTCGAGCAGGCACGCGATACCGCGGTGCGCGGCTGGGACAGACTGGGCAAGGCCTTCGA
CGAACGCGTGAAGGGCGTGCTGCGCACGCTCAACATTCCCGAGCAGGAAGAATTGGAAAACCTGCGGCGCGAGGTCGAAT
CGCTGAAGGCCCAGGTCCGCGCAAATACCGCGGCCACCAAGCGTGCCAACCGTACCGCTAACCAGGCGGCGCAGGCGGCC
AGCGAGACGACCGCTGCCGGCGGCGCGGGTGCCGGGGCGGCATCGTCGTCCAGCAATCCCGGTGCGTTCGACCCGGAATG
A

Upstream 100 bases:

>100_bases
TGCTTTCGGCACGCCTGATCGGGCAGTGCTTCACCTGCCCGATGCAGGGTCGGCACTAGGGTGAACGCAATGTCACGTTG
GCAACCTACAGGAGCATCGC

Downstream 100 bases:

>100_bases
GCGCAACAGTGAAAGCAGCCGCGCTGTCATGTGACGGCGCGGTTGTTGCCCGAGATGGTGAAGGGAGTCATCGCCGAGTG
CAGCTGCGCACTACGTTTCT

Product: putative poly(hydroxyalcanoate) granule associated protein

Products: NA

Alternate protein names: Poly(Hydroxyalcanoate) Granule Associated Protein; Polyhydroxyalkanoate Synthesis Protein PhaF; Polyhydroxyalkanoate Granule-Associated Protein PhaF; Polyhydroxyalcanoate_granule_associated_protein; Protein Associated With Polyhydroxyalkanoate Inclusion; Polygranule-Associated Protein

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MTTGYDQNGNRGNAAQGFQAQAEQISRRLGESAQTVWLAGLGALGRVQNEGSKLFDSLVREGAAYERTGQRRAAESVDEL
REEVETQFEQARDTAVRGWDRLGKAFDERVKGVLRTLNIPEQEELENLRREVESLKAQVRANTAATKRANRTANQAAQAA
SETTAAGGAGAGAASSSSNPGAFDPE

Sequences:

>Translated_186_residues
MTTGYDQNGNRGNAAQGFQAQAEQISRRLGESAQTVWLAGLGALGRVQNEGSKLFDSLVREGAAYERTGQRRAAESVDEL
REEVETQFEQARDTAVRGWDRLGKAFDERVKGVLRTLNIPEQEELENLRREVESLKAQVRANTAATKRANRTANQAAQAA
SETTAAGGAGAGAASSSSNPGAFDPE
>Mature_185_residues
TTGYDQNGNRGNAAQGFQAQAEQISRRLGESAQTVWLAGLGALGRVQNEGSKLFDSLVREGAAYERTGQRRAAESVDELR
EEVETQFEQARDTAVRGWDRLGKAFDERVKGVLRTLNIPEQEELENLRREVESLKAQVRANTAATKRANRTANQAAQAAS
ETTAAGGAGAGAASSSSNPGAFDPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19954; Mature: 19823

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTGYDQNGNRGNAAQGFQAQAEQISRRLGESAQTVWLAGLGALGRVQNEGSKLFDSLVR
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGAAYERTGQRRAAESVDELREEVETQFEQARDTAVRGWDRLGKAFDERVKGVLRTLNIP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EQEELENLRREVESLKAQVRANTAATKRANRTANQAAQAASETTAAGGAGAGAASSSSNP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
GAFDPE
CCCCCC
>Mature Secondary Structure 
TTGYDQNGNRGNAAQGFQAQAEQISRRLGESAQTVWLAGLGALGRVQNEGSKLFDSLVR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGAAYERTGQRRAAESVDELREEVETQFEQARDTAVRGWDRLGKAFDERVKGVLRTLNIP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EQEELENLRREVESLKAQVRANTAATKRANRTANQAAQAASETTAAGGAGAGAASSSSNP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
GAFDPE
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA