| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is crt [H]
Identifier: 78047181
GI number: 78047181
Start: 1837902
End: 1838684
Strand: Reverse
Name: crt [H]
Synonym: XCV1625
Alternate gene names: 78047181
Gene position: 1838684-1837902 (Counterclockwise)
Preceding gene: 78047186
Following gene: 78047180
Centisome position: 35.51
GC content: 64.88
Gene sequence:
>783_bases ATGTCCAATCACGTCATTCTGATCGCCGACCACGCCAGCGTCCGGACGATTACGGTCAATCGGCCGGACAAACTGAACGC ACTGAACCGGCAGACCATGCAGGCCCTGGATCAGGCGTTCCAAGACGCAGCCAATGCGGACGACATACGCGCCGTGATTC TCACCGGCGCCGGCCCCAAGGCCTTCGTGGCGGGTGCCGATATCGCGGAAATGAGTGACCTGTCGGCAATCCAGGGGCGC GAGTTCTCGTTGCTGGGCCAGCAACTGATGCGCCGGATCGAGCGCATGCCCAAGCCGGTGATCGCGATGATCAATGGCTT TGCGCTGGGCGGCGGCCTGGAGCTGGCAATGGCGTGTCACCTGCGCATCGCCGCAGCAACAGCGCGCCTGGGGCAACCGG AAATCAATCTCGGCCTGATTCCCGGCTTTGGCGGCACGCAGCGCCTGCTGCGCCTCACCGGCCGCGCCGCAGCGCTGGAA CTGAGCCTGCTCGGCCTGCCGATCGACGCGGCCCGCGCACTGCAATTGGGCCTGGTCAATCGCGTGGTCGAAGCGGATGC CCTGCACGAAGAAACGCTGGCGCTTGCGCAACGCCTGGCAACTGCAGCGCCGCTGGCACTGCGCGGCATTCTGGATGCGG TGGTGTTCGGCGGCGAATGCGCCATCGAGGAAGGCCTGCAGCTGGAAACCGCGCAATTTGCGTTGTTGTTCGCCACTGAC GACATGCGCGAAGGCACTCGCGCATTCCTCGACAAACGCCCTGCCCAGTTCCACAACCGCTGA
Upstream 100 bases:
>100_bases GCGGCCGCGATACCGAACCGCTACTTATCGCGAAAGCTAGGACCAGCAAGGGTTTTGGAAGTTCCGTGTTTACTATTTTT TTACGTTCGCAAGGGTTCAC
Downstream 100 bases:
>100_bases TATCGCCATGACGCTCGAGCTCATTCCGGCATCGCGTCCGTTGGCGCTGCGGTTGTTCGATTGTGTGCAGGCCGACGACC TGGATCGTGCGCTGGCACTC
Product: 3-hydroxybutyryl-CoA dehydratase
Products: NA
Alternate protein names: Crotonase [H]
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MSNHVILIADHASVRTITVNRPDKLNALNRQTMQALDQAFQDAANADDIRAVILTGAGPKAFVAGADIAEMSDLSAIQGR EFSLLGQQLMRRIERMPKPVIAMINGFALGGGLELAMACHLRIAAATARLGQPEINLGLIPGFGGTQRLLRLTGRAAALE LSLLGLPIDAARALQLGLVNRVVEADALHEETLALAQRLATAAPLALRGILDAVVFGGECAIEEGLQLETAQFALLFATD DMREGTRAFLDKRPAQFHNR
Sequences:
>Translated_260_residues MSNHVILIADHASVRTITVNRPDKLNALNRQTMQALDQAFQDAANADDIRAVILTGAGPKAFVAGADIAEMSDLSAIQGR EFSLLGQQLMRRIERMPKPVIAMINGFALGGGLELAMACHLRIAAATARLGQPEINLGLIPGFGGTQRLLRLTGRAAALE LSLLGLPIDAARALQLGLVNRVVEADALHEETLALAQRLATAAPLALRGILDAVVFGGECAIEEGLQLETAQFALLFATD DMREGTRAFLDKRPAQFHNR >Mature_259_residues SNHVILIADHASVRTITVNRPDKLNALNRQTMQALDQAFQDAANADDIRAVILTGAGPKAFVAGADIAEMSDLSAIQGRE FSLLGQQLMRRIERMPKPVIAMINGFALGGGLELAMACHLRIAAATARLGQPEINLGLIPGFGGTQRLLRLTGRAAALEL SLLGLPIDAARALQLGLVNRVVEADALHEETLALAQRLATAAPLALRGILDAVVFGGECAIEEGLQLETAQFALLFATDD MREGTRAFLDKRPAQFHNR
Specific function: Could Possibly Oxidizes Fatty Acids Using Specific Components (By Similarity). [C]
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=263, Percent_Identity=39.1634980988593, Blast_Score=171, Evalue=8e-43, Organism=Homo sapiens, GI20127408, Length=175, Percent_Identity=38.2857142857143, Blast_Score=125, Evalue=3e-29, Organism=Homo sapiens, GI68989263, Length=190, Percent_Identity=42.1052631578947, Blast_Score=124, Evalue=7e-29, Organism=Homo sapiens, GI4502327, Length=253, Percent_Identity=34.3873517786561, Blast_Score=115, Evalue=6e-26, Organism=Homo sapiens, GI31542718, Length=253, Percent_Identity=30.4347826086957, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI70995211, Length=250, Percent_Identity=29.2, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI157694516, Length=218, Percent_Identity=29.3577981651376, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI213417737, Length=218, Percent_Identity=29.3577981651376, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI261878539, Length=108, Percent_Identity=49.0740740740741, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI157694520, Length=190, Percent_Identity=30, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI37594469, Length=210, Percent_Identity=28.5714285714286, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI37594471, Length=210, Percent_Identity=28.5714285714286, Blast_Score=81, Evalue=8e-16, Organism=Homo sapiens, GI150378541, Length=248, Percent_Identity=30.241935483871, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI62530384, Length=202, Percent_Identity=29.7029702970297, Blast_Score=71, Evalue=1e-12, Organism=Escherichia coli, GI1787659, Length=257, Percent_Identity=40.0778210116732, Blast_Score=161, Evalue=5e-41, Organism=Escherichia coli, GI1788597, Length=249, Percent_Identity=35.7429718875502, Blast_Score=135, Evalue=3e-33, Organism=Escherichia coli, GI87082183, Length=263, Percent_Identity=33.8403041825095, Blast_Score=128, Evalue=4e-31, Organism=Escherichia coli, GI1788682, Length=201, Percent_Identity=40.2985074626866, Blast_Score=127, Evalue=7e-31, Organism=Escherichia coli, GI221142681, Length=254, Percent_Identity=32.6771653543307, Blast_Score=123, Evalue=1e-29, Organism=Escherichia coli, GI1787660, Length=263, Percent_Identity=35.361216730038, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1790281, Length=177, Percent_Identity=35.5932203389831, Blast_Score=110, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17554946, Length=253, Percent_Identity=39.1304347826087, Blast_Score=172, Evalue=2e-43, Organism=Caenorhabditis elegans, GI25145438, Length=245, Percent_Identity=38.7755102040816, Blast_Score=163, Evalue=8e-41, Organism=Caenorhabditis elegans, GI17540714, Length=221, Percent_Identity=36.6515837104072, Blast_Score=141, Evalue=3e-34, Organism=Caenorhabditis elegans, GI17534483, Length=255, Percent_Identity=30.1960784313725, Blast_Score=120, Evalue=9e-28, Organism=Caenorhabditis elegans, GI17558304, Length=182, Percent_Identity=35.7142857142857, Blast_Score=113, Evalue=9e-26, Organism=Caenorhabditis elegans, GI17508953, Length=181, Percent_Identity=37.5690607734807, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI25144276, Length=181, Percent_Identity=37.5690607734807, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17508951, Length=181, Percent_Identity=37.5690607734807, Blast_Score=111, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17536985, Length=275, Percent_Identity=28, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17560910, Length=257, Percent_Identity=28.4046692607004, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI25144160, Length=192, Percent_Identity=32.8125, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI25144157, Length=192, Percent_Identity=32.8125, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17549921, Length=210, Percent_Identity=31.4285714285714, Blast_Score=91, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17540306, Length=253, Percent_Identity=29.6442687747036, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI25141363, Length=208, Percent_Identity=25, Blast_Score=67, Evalue=9e-12, Organism=Saccharomyces cerevisiae, GI6320241, Length=222, Percent_Identity=29.2792792792793, Blast_Score=97, Evalue=2e-21, Organism=Drosophila melanogaster, GI20129971, Length=248, Percent_Identity=43.5483870967742, Blast_Score=190, Evalue=9e-49, Organism=Drosophila melanogaster, GI24653477, Length=248, Percent_Identity=43.5483870967742, Blast_Score=190, Evalue=9e-49, Organism=Drosophila melanogaster, GI24653139, Length=249, Percent_Identity=34.5381526104418, Blast_Score=141, Evalue=5e-34, Organism=Drosophila melanogaster, GI19922422, Length=260, Percent_Identity=26.5384615384615, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24583077, Length=178, Percent_Identity=41.0112359550562, Blast_Score=98, Evalue=4e-21, Organism=Drosophila melanogaster, GI24583079, Length=178, Percent_Identity=41.0112359550562, Blast_Score=98, Evalue=4e-21, Organism=Drosophila melanogaster, GI19920382, Length=224, Percent_Identity=29.0178571428571, Blast_Score=98, Evalue=5e-21, Organism=Drosophila melanogaster, GI19921000, Length=178, Percent_Identity=41.0112359550562, Blast_Score=98, Evalue=5e-21, Organism=Drosophila melanogaster, GI21357171, Length=257, Percent_Identity=31.1284046692607, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24650670, Length=250, Percent_Identity=30, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI24654903, Length=186, Percent_Identity=25.8064516129032, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI28571730, Length=195, Percent_Identity=27.1794871794872, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI28571729, Length=195, Percent_Identity=27.1794871794872, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24583165, Length=204, Percent_Identity=28.4313725490196, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.55 [H]
Molecular weight: Translated: 27771; Mature: 27639
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNHVILIADHASVRTITVNRPDKLNALNRQTMQALDQAFQDAANADDIRAVILTGAGPK CCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCC AFVAGADIAEMSDLSAIQGREFSLLGQQLMRRIERMPKPVIAMINGFALGGGLELAMACH CEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHCEEECCCHHHHHHHH LRIAAATARLGQPEINLGLIPGFGGTQRLLRLTGRAAALELSLLGLPIDAARALQLGLVN HHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHCCHHEEEEEEECCCHHHHHHHHHHHHH RVVEADALHEETLALAQRLATAAPLALRGILDAVVFGGECAIEEGLQLETAQFALLFATD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEHEEEEEEEECC DMREGTRAFLDKRPAQFHNR CHHHHHHHHHHCCCHHHCCC >Mature Secondary Structure SNHVILIADHASVRTITVNRPDKLNALNRQTMQALDQAFQDAANADDIRAVILTGAGPK CCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCC AFVAGADIAEMSDLSAIQGREFSLLGQQLMRRIERMPKPVIAMINGFALGGGLELAMACH CEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHCEEECCCHHHHHHHH LRIAAATARLGQPEINLGLIPGFGGTQRLLRLTGRAAALELSLLGLPIDAARALQLGLVN HHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHCCHHEEEEEEECCCHHHHHHHHHHHHH RVVEADALHEETLALAQRLATAAPLALRGILDAVVFGGECAIEEGLQLETAQFALLFATD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEHEEEEEEEECC DMREGTRAFLDKRPAQFHNR CHHHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8655474; 11466286 [H]