| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78047143
Identifier: 78047143
GI number: 78047143
Start: 1793815
End: 1794345
Strand: Reverse
Name: 78047143
Synonym: XCV1587
Alternate gene names: NA
Gene position: 1794345-1793815 (Counterclockwise)
Preceding gene: 78047144
Following gene: 78047142
Centisome position: 34.65
GC content: 64.22
Gene sequence:
>531_bases ATGAAATTGCTTGTTTCGGCGGTAGTGATGAGCGTATTGCTGGCGGGTTGCGGCAAGTCCGAACCCACCGTCAACGTCTC CGGCCAGGCCAATGGTGCCGGCGTGACCTTTACCGGCAAGAGCCTGACGCTCAAGCGCGACGGCTTGCCGGCCGCCACCA TCGGTGTCGATGGCGCGCTCAGCATCGACGGCAAGCCGGTGGACTTGAATGATGCGCAACGCCAGGCGATGCGCAGTTAC TACGCGCAGGTGCAAGGCGTGGCCAAGAAGGGCATCGACATCGGCACCCAGGGCGCGGCGTTCGGCGCACATGCGGCAGG CGAAGCGATCAAGGGCGTGCTCAGCGGCAACTCAGATCGGATCGGCGACAAGATCGAGGCCGAGGCAGACACCTTCAAGC ACAAGGCCCTGCAGATCTGCGATCAGCTGGCCACGCTGCGCACCGCACAGGATGCAGCCGCGCACCTGGTGCCGGCCTTT GCGCCGTACTCGACCCTGACGCAGCACGACATCGACGATTGCCGCAAGTAG
Upstream 100 bases:
>100_bases AAGGGCAGCGGCGATATCGATGTGAGCGAGGTCTCCGGCAGCACCCGGGTACCGACAGACAAATGACGACGACTTCTTTC AGGATGTGGGGGAATTGCTG
Downstream 100 bases:
>100_bases ATGGCCCGACAGACCGACGACGCGCACCGCTGGGCGGGCGTCGTCGGTGCGCGGCGCGGCATGTGCCGATCGTCCACTGC GACGCCGGTGCGCCACACGC
Product: putative secreted protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MKLLVSAVVMSVLLAGCGKSEPTVNVSGQANGAGVTFTGKSLTLKRDGLPAATIGVDGALSIDGKPVDLNDAQRQAMRSY YAQVQGVAKKGIDIGTQGAAFGAHAAGEAIKGVLSGNSDRIGDKIEAEADTFKHKALQICDQLATLRTAQDAAAHLVPAF APYSTLTQHDIDDCRK
Sequences:
>Translated_176_residues MKLLVSAVVMSVLLAGCGKSEPTVNVSGQANGAGVTFTGKSLTLKRDGLPAATIGVDGALSIDGKPVDLNDAQRQAMRSY YAQVQGVAKKGIDIGTQGAAFGAHAAGEAIKGVLSGNSDRIGDKIEAEADTFKHKALQICDQLATLRTAQDAAAHLVPAF APYSTLTQHDIDDCRK >Mature_176_residues MKLLVSAVVMSVLLAGCGKSEPTVNVSGQANGAGVTFTGKSLTLKRDGLPAATIGVDGALSIDGKPVDLNDAQRQAMRSY YAQVQGVAKKGIDIGTQGAAFGAHAAGEAIKGVLSGNSDRIGDKIEAEADTFKHKALQICDQLATLRTAQDAAAHLVPAF APYSTLTQHDIDDCRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18165; Mature: 18165
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLVSAVVMSVLLAGCGKSEPTVNVSGQANGAGVTFTGKSLTLKRDGLPAATIGVDGAL CHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEECCEEEEECCCCCEEEECCCCEE SIDGKPVDLNDAQRQAMRSYYAQVQGVAKKGIDIGTQGAAFGAHAAGEAIKGVLSGNSDR ECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC IGDKIEAEADTFKHKALQICDQLATLRTAQDAAAHLVPAFAPYSTLTQHDIDDCRK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHCC >Mature Secondary Structure MKLLVSAVVMSVLLAGCGKSEPTVNVSGQANGAGVTFTGKSLTLKRDGLPAATIGVDGAL CHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEECCEEEEECCCCCEEEECCCCEE SIDGKPVDLNDAQRQAMRSYYAQVQGVAKKGIDIGTQGAAFGAHAAGEAIKGVLSGNSDR ECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC IGDKIEAEADTFKHKALQICDQLATLRTAQDAAAHLVPAFAPYSTLTQHDIDDCRK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA