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The map label for this gene is 78047109

Identifier: 78047109

GI number: 78047109

Start: 1751411

End: 1752943

Strand: Reverse

Name: 78047109

Synonym: XCV1553

Alternate gene names: NA

Gene position: 1752943-1751411 (Counterclockwise)

Preceding gene: 78047112

Following gene: 78047108

Centisome position: 33.85

GC content: 52.12

Gene sequence:

>1533_bases
GTGCCGAAGCCTTATTTTTTGCGCCGCCCTGCTGGGCTCTATGTGCGCTTCTTCGTCCCGACTGACCTGCAAGCCCTCAT
TGGCTCGCGCTACCTTGTCCGTCCCGTTCGCTTGTCCCTGGGTGATGCTGCCCGTCTGGCCGTGGCACGAACTGCTGTGG
CACTCTCGGAAGCATTCGATCGGATGCGGCGGGGGGCAAGCAGCATGAAGGACGATTTGCTGAGCCAGGCTTTGGCCGCA
TTGCAAGGCAACGAAGCTCGGCCCTACACCATTAAGGTGGGTGGGATGGAACTGTCTGCTGACGGGGCCGAAGACCATGC
TCGGCTGCTCGAAGCGTTGAAAAATCTCCCGCTGCCCTCTTCCACCGAAGTGAGGAAGAAGGCCGGGCCGTTATTTTCTG
AACGCGCAGCTATCCATGTTCGTGAGATGAAACGAGTCGGTCGAAGTGCGACCAACATCTTCGACACCGAATACAGCCTC
GGATTGTTCGTTGCATTGGTAGGCGACAAGCCTGTGGAAGACTACAAGGCCGATGATGTGCGGAGCTTCTTGGAAGCCAT
TGAGCACTACCCCAGCAACGCGAGCAAAAAGGCAGAATTTGCAGGACTGGCTCCTGCTGACATTTTGAAGAAAGCCAAAA
AAGGCAGTTACGCCAAGCTTGGGATGCGCACTAAGGAAAAGCATCGAGACCGTCTGGCTGCATTTTTTAATGCGTTGGCC
AGCGAAGATCTGATCAGCAAAGCACCGCACAAAGCAATTATAAATCGGTCAAAGGCAACCACCGATGAGCCAAGTCGCAA
TCCATTTTCCAAAGACGAACTCAATGCCTTGTTCGAGCCTTCAACATTTAAAATGTGGGCATCGAAATATCCTCATCGCT
GGTTCGGCACTTTGTTGGGATTGACCACAGGCGCCCGCATTAATGAAGTCGCACAGCTTTATGTGGATGATCTCGATCAA
GTTGGAGGATGTTGGGGCATCCACATTCGTGCAGCACGAGCCGATCAGCGTTTGAAAAATCCGCATTCTTCCCGCTTTGT
GCCGCTTCCCTCGGCATTGATTGAAGCAGGAATTTTGATCTATCGCGATGAGGTCAAGGCCGCAGGTTTTGAGAGACTTT
TTCCACATTTGCCGTATCACAGTGAACATGGCTACGGGGACGCATTGGGCGATCAATTCCGGACCTATGCTAAAAAATGC
GGACTGACGCAACGACTCAAAAGCTTCCACTGCTTTCGCCATACTCTTTCCAATGCGTTGATCAATGAGCATGGCATTTC
AGTGATGACCACTCAGCAGATCACAGGGCATGATCTGACGCTCCCACCTGGGCTGAAACATTATGTTGATCCGCCCACGG
TTCCAGCCCGGTTGCAAGCCTTGGAAAAATTTGGCCCACCCGTCGATTTGCCAGCCTATCAGCCCAAGCAATTTAATATT
TCGTTTAAGCAGGTTCGTCACATGGAACGGCGACGACAGACTGCAAAGCAAGAGACAGTTGCGGTAAAAAATAAAACTGG
CTGGAAAAATTAG

Upstream 100 bases:

>100_bases
GCGGAAAAGAGCAGTAAGTGCTTGATTCTGCGAAGGTTAGGCCCGGGGTTTGATGTTCAGTTTGAGCCTGCGTTAGGTAT
CAAACGAGGTATCAAACCCC

Downstream 100 bases:

>100_bases
ACACGAGGCTTCTACACATGGAAGGTCAAGATCAAGTGGCAAAAGAGGAAGCTGCAAGCGCATCCGAGACACTGCCATCA
ATCATCGACAAGCCCGTTCC

Product: phage-related integrase

Products: NA

Alternate protein names: Integrase; Phage-Related Integrase; Phage Integrase; Phage Integrase Family Protein; Phage Integrase Family Site Specific Recombinase; Site-Specific Recombinase Phage Integrase Family; Site-Specific Recombinase; Phage Integerase; Integrase/Resolvase Recombinase Protein; DNA-Binfing Protein

Number of amino acids: Translated: 510; Mature: 509

Protein sequence:

>510_residues
MPKPYFLRRPAGLYVRFFVPTDLQALIGSRYLVRPVRLSLGDAARLAVARTAVALSEAFDRMRRGASSMKDDLLSQALAA
LQGNEARPYTIKVGGMELSADGAEDHARLLEALKNLPLPSSTEVRKKAGPLFSERAAIHVREMKRVGRSATNIFDTEYSL
GLFVALVGDKPVEDYKADDVRSFLEAIEHYPSNASKKAEFAGLAPADILKKAKKGSYAKLGMRTKEKHRDRLAAFFNALA
SEDLISKAPHKAIINRSKATTDEPSRNPFSKDELNALFEPSTFKMWASKYPHRWFGTLLGLTTGARINEVAQLYVDDLDQ
VGGCWGIHIRAARADQRLKNPHSSRFVPLPSALIEAGILIYRDEVKAAGFERLFPHLPYHSEHGYGDALGDQFRTYAKKC
GLTQRLKSFHCFRHTLSNALINEHGISVMTTQQITGHDLTLPPGLKHYVDPPTVPARLQALEKFGPPVDLPAYQPKQFNI
SFKQVRHMERRRQTAKQETVAVKNKTGWKN

Sequences:

>Translated_510_residues
MPKPYFLRRPAGLYVRFFVPTDLQALIGSRYLVRPVRLSLGDAARLAVARTAVALSEAFDRMRRGASSMKDDLLSQALAA
LQGNEARPYTIKVGGMELSADGAEDHARLLEALKNLPLPSSTEVRKKAGPLFSERAAIHVREMKRVGRSATNIFDTEYSL
GLFVALVGDKPVEDYKADDVRSFLEAIEHYPSNASKKAEFAGLAPADILKKAKKGSYAKLGMRTKEKHRDRLAAFFNALA
SEDLISKAPHKAIINRSKATTDEPSRNPFSKDELNALFEPSTFKMWASKYPHRWFGTLLGLTTGARINEVAQLYVDDLDQ
VGGCWGIHIRAARADQRLKNPHSSRFVPLPSALIEAGILIYRDEVKAAGFERLFPHLPYHSEHGYGDALGDQFRTYAKKC
GLTQRLKSFHCFRHTLSNALINEHGISVMTTQQITGHDLTLPPGLKHYVDPPTVPARLQALEKFGPPVDLPAYQPKQFNI
SFKQVRHMERRRQTAKQETVAVKNKTGWKN
>Mature_509_residues
PKPYFLRRPAGLYVRFFVPTDLQALIGSRYLVRPVRLSLGDAARLAVARTAVALSEAFDRMRRGASSMKDDLLSQALAAL
QGNEARPYTIKVGGMELSADGAEDHARLLEALKNLPLPSSTEVRKKAGPLFSERAAIHVREMKRVGRSATNIFDTEYSLG
LFVALVGDKPVEDYKADDVRSFLEAIEHYPSNASKKAEFAGLAPADILKKAKKGSYAKLGMRTKEKHRDRLAAFFNALAS
EDLISKAPHKAIINRSKATTDEPSRNPFSKDELNALFEPSTFKMWASKYPHRWFGTLLGLTTGARINEVAQLYVDDLDQV
GGCWGIHIRAARADQRLKNPHSSRFVPLPSALIEAGILIYRDEVKAAGFERLFPHLPYHSEHGYGDALGDQFRTYAKKCG
LTQRLKSFHCFRHTLSNALINEHGISVMTTQQITGHDLTLPPGLKHYVDPPTVPARLQALEKFGPPVDLPAYQPKQFNIS
FKQVRHMERRRQTAKQETVAVKNKTGWKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56996; Mature: 56865

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKPYFLRRPAGLYVRFFVPTDLQALIGSRYLVRPVRLSLGDAARLAVARTAVALSEAFD
CCCCCCEECCCCEEEEEECCCCHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
RMRRGASSMKDDLLSQALAALQGNEARPYTIKVGGMELSADGAEDHARLLEALKNLPLPS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEECCCCCHHHHHHHHHHHCCCCCC
STEVRKKAGPLFSERAAIHVREMKRVGRSATNIFDTEYSLGLFVALVGDKPVEDYKADDV
CCHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHH
RSFLEAIEHYPSNASKKAEFAGLAPADILKKAKKGSYAKLGMRTKEKHRDRLAAFFNALA
HHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHH
SEDLISKAPHKAIINRSKATTDEPSRNPFSKDELNALFEPSTFKMWASKYPHRWFGTLLG
HHHHHHHCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCHHHHHHHHH
LTTGARINEVAQLYVDDLDQVGGCWGIHIRAARADQRLKNPHSSRFVPLPSALIEAGILI
HCCCCHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHCCCCCCCCCCCCHHHHHCCEEE
YRDEVKAAGFERLFPHLPYHSEHGYGDALGDQFRTYAKKCGLTQRLKSFHCFRHTLSNAL
EECHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
INEHGISVMTTQQITGHDLTLPPGLKHYVDPPTVPARLQALEKFGPPVDLPAYQPKQFNI
HHHCCCEEEEECCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
SFKQVRHMERRRQTAKQETVAVKNKTGWKN
HHHHHHHHHHHHHHHHHHHHEEECCCCCCC
>Mature Secondary Structure 
PKPYFLRRPAGLYVRFFVPTDLQALIGSRYLVRPVRLSLGDAARLAVARTAVALSEAFD
CCCCCEECCCCEEEEEECCCCHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
RMRRGASSMKDDLLSQALAALQGNEARPYTIKVGGMELSADGAEDHARLLEALKNLPLPS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEECCCCCHHHHHHHHHHHCCCCCC
STEVRKKAGPLFSERAAIHVREMKRVGRSATNIFDTEYSLGLFVALVGDKPVEDYKADDV
CCHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHH
RSFLEAIEHYPSNASKKAEFAGLAPADILKKAKKGSYAKLGMRTKEKHRDRLAAFFNALA
HHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHH
SEDLISKAPHKAIINRSKATTDEPSRNPFSKDELNALFEPSTFKMWASKYPHRWFGTLLG
HHHHHHHCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCHHHHHHHHH
LTTGARINEVAQLYVDDLDQVGGCWGIHIRAARADQRLKNPHSSRFVPLPSALIEAGILI
HCCCCHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHCCCCCCCCCCCCHHHHHCCEEE
YRDEVKAAGFERLFPHLPYHSEHGYGDALGDQFRTYAKKCGLTQRLKSFHCFRHTLSNAL
EECHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
INEHGISVMTTQQITGHDLTLPPGLKHYVDPPTVPARLQALEKFGPPVDLPAYQPKQFNI
HHHCCCEEEEECCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
SFKQVRHMERRRQTAKQETVAVKNKTGWKN
HHHHHHHHHHHHHHHHHHHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA