Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
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Accession | NC_007508 |
Length | 5,178,466 |
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The map label for this gene is 78047062
Identifier: 78047062
GI number: 78047062
Start: 1699144
End: 1700913
Strand: Reverse
Name: 78047062
Synonym: XCV1506
Alternate gene names: NA
Gene position: 1700913-1699144 (Counterclockwise)
Preceding gene: 78047065
Following gene: 78047061
Centisome position: 32.85
GC content: 64.52
Gene sequence:
>1770_bases ATGCCCCGCTTCACTCGCCTTGCCCTGAGCCTGTTGCTGCTGACTTCCGCCCCCGCCGCGCTGGCTGCCGCGCCGCTGAC CACCCAGGCAGAGCGCAGCGGTTTCATCCAGACCGGCCGCTACGACGAAGTCATTGCACTGTGCGATGCGTTTGCGCAGC GCTACCCGCAGGCGGTGCGTTGCATCCAGTTCGGCACCACGCCCGAGGGCAGGCCGATGAAGGCCTTGATCGTCTCCACC AGTGGCGCACTCGACGCGCAATCGGCCGCGCAACGCAAGCTGCCGGTGGTTTTGGTCCAGGGCGGCATCCATGCCGGCGA GATCGATGGCAAGGATGCGGGCTTTCTGGCCCTGCGCGAGTTGCTCGATGGCAAGGCCGGCCATGGCGTGCTGGACAAGC TGGTGTGGGTGTTCGTGCCGGTATTCAACGTCGATGGGCATGAGCGCTTCGGTGCCTGGAACCGCCCCAACCAGCGCGGT CCCGAACAGATGGGCTGGCGCACCACCGCGCAGAACCTCAATCTCAACCGCGATTACGTCAAGGCCGACGCGCCGGAAAT GCAGGCCATGCTGCAACTGGTGCAGCAATGGGACCCGTTGATGTATGTAGACCTGCACGTCACCGACGGCGCCAAGTTCG AGCACGACGTCTCGGTGCAGGTGGAACCGGTGCATGCCGGCGATGCGGGCTTGCAGCGCGATGGCACACGCTGGCGCGAC GCAGTGCTCGCCGATCTGAAAAAACAGGGCTCGTTGCCGCTGCCGTACTACCCGTCCTTCGTGCACGAAGACGACCCCAG TTCCGGCTTTGCCGATGATGTGTCGCCGCCACGCTTTTCGCACGGCTATTTCCTGCTACGCAACCGCTTCGGCATGCTGG TGGAAACGCATTCGTGGAAGGATTACCCCACCCGTGTGCGGATCACCCGCAATGCCATCGTCTCGGTGTTGCAGCAGGCC GCACGCCATGGCACGCAGTGGCGCGCCGATGCATTGGCTGCCGATCAGCGCGCCACGCGTCTGGCCGGCACGACCGAACC GTTGAGCTTCGCTGCTAGCCCAGACGCACGCACCGTCGCGTTCCGTGGCTATGCGTATACGCGCACACCGTCGCCGATTT CCGGGGCACTGATGACGCACTACGACGAAAGCAAGCCGCAAGTCTGGAAGGTGCCGCTGCGCGACCAGATCAAGCCCGAT GTGGTGGTGGATGCGCCACGCGGCGGCTACCTGGTCCCGCCTGCGCAAGCGGCCTTGGTGGGCGAAAAACTGCGCCTGCA TGGCATCCAATTCACGACCATCGGCACTGCGGCGCAGCGGCCGGTGCAAACCTTCCGCGCCGACGCGGTCAAGTTCGCAG CACGCTCCAACGAAAGCCACCAGACAGTGGAACTCAGCGGGCAGTGGCGCAATGAAACCCGCAGCGTGCCGGCCGGCTCG TTGTTCGTGCCGATCGCCCAACCCAAGGCGCGCCTGGTGATGGCGATCCTGGAACCGCAGGCGCCGGATTCGCTGCTGCA GTGGGGCTTTTTCAATACCGCGTTCGAGCGCAAGGAATACATGGAAGCCTACGTCGCCGAAGAGGTGGCGCGCGACATGC TCGCCAACGATGCCGCGTTGAAGGCGCAGTTCGAACAGCGCATCGCCAGCGATCCGGACTTTTCCAACAACCCGCAGGCG CGGCTGGAATTTTTTGCCAAGCGCCACACATCCTGGGATGAGCGCTACCAGCTCTACCCGGTACTCCGCACCGCGCAGAC CGACTTCTAA
Upstream 100 bases:
>100_bases CTTGGCACCGATCACAGCAAGACCATGACGCAGTGCAGATTGGCCTTGCACGCCGGCTCGGCTACATTGCAAACGTTTTC CTGGAACACTGGACCGCTGG
Downstream 100 bases:
>100_bases CCGCCTGCCGATTCTGCACGCGTCGGCGCGGCATCACCGCGCCTTCCAGACGTGGGCACTTAGTGCCCCTCTCATATGTT TTGACCCAGCACCACAAGGA
Product: putative secreted protein
Products: NA
Alternate protein names: Carboxypeptidase; M14 Family Peptidase; Peptidase Family M; Zinc Carboxypeptidase; Zinc Carboxypeptidase Family; Zinc Carboxypeptidase Family Protein; Secreted Protein
Number of amino acids: Translated: 589; Mature: 588
Protein sequence:
>589_residues MPRFTRLALSLLLLTSAPAALAAAPLTTQAERSGFIQTGRYDEVIALCDAFAQRYPQAVRCIQFGTTPEGRPMKALIVST SGALDAQSAAQRKLPVVLVQGGIHAGEIDGKDAGFLALRELLDGKAGHGVLDKLVWVFVPVFNVDGHERFGAWNRPNQRG PEQMGWRTTAQNLNLNRDYVKADAPEMQAMLQLVQQWDPLMYVDLHVTDGAKFEHDVSVQVEPVHAGDAGLQRDGTRWRD AVLADLKKQGSLPLPYYPSFVHEDDPSSGFADDVSPPRFSHGYFLLRNRFGMLVETHSWKDYPTRVRITRNAIVSVLQQA ARHGTQWRADALAADQRATRLAGTTEPLSFAASPDARTVAFRGYAYTRTPSPISGALMTHYDESKPQVWKVPLRDQIKPD VVVDAPRGGYLVPPAQAALVGEKLRLHGIQFTTIGTAAQRPVQTFRADAVKFAARSNESHQTVELSGQWRNETRSVPAGS LFVPIAQPKARLVMAILEPQAPDSLLQWGFFNTAFERKEYMEAYVAEEVARDMLANDAALKAQFEQRIASDPDFSNNPQA RLEFFAKRHTSWDERYQLYPVLRTAQTDF
Sequences:
>Translated_589_residues MPRFTRLALSLLLLTSAPAALAAAPLTTQAERSGFIQTGRYDEVIALCDAFAQRYPQAVRCIQFGTTPEGRPMKALIVST SGALDAQSAAQRKLPVVLVQGGIHAGEIDGKDAGFLALRELLDGKAGHGVLDKLVWVFVPVFNVDGHERFGAWNRPNQRG PEQMGWRTTAQNLNLNRDYVKADAPEMQAMLQLVQQWDPLMYVDLHVTDGAKFEHDVSVQVEPVHAGDAGLQRDGTRWRD AVLADLKKQGSLPLPYYPSFVHEDDPSSGFADDVSPPRFSHGYFLLRNRFGMLVETHSWKDYPTRVRITRNAIVSVLQQA ARHGTQWRADALAADQRATRLAGTTEPLSFAASPDARTVAFRGYAYTRTPSPISGALMTHYDESKPQVWKVPLRDQIKPD VVVDAPRGGYLVPPAQAALVGEKLRLHGIQFTTIGTAAQRPVQTFRADAVKFAARSNESHQTVELSGQWRNETRSVPAGS LFVPIAQPKARLVMAILEPQAPDSLLQWGFFNTAFERKEYMEAYVAEEVARDMLANDAALKAQFEQRIASDPDFSNNPQA RLEFFAKRHTSWDERYQLYPVLRTAQTDF >Mature_588_residues PRFTRLALSLLLLTSAPAALAAAPLTTQAERSGFIQTGRYDEVIALCDAFAQRYPQAVRCIQFGTTPEGRPMKALIVSTS GALDAQSAAQRKLPVVLVQGGIHAGEIDGKDAGFLALRELLDGKAGHGVLDKLVWVFVPVFNVDGHERFGAWNRPNQRGP EQMGWRTTAQNLNLNRDYVKADAPEMQAMLQLVQQWDPLMYVDLHVTDGAKFEHDVSVQVEPVHAGDAGLQRDGTRWRDA VLADLKKQGSLPLPYYPSFVHEDDPSSGFADDVSPPRFSHGYFLLRNRFGMLVETHSWKDYPTRVRITRNAIVSVLQQAA RHGTQWRADALAADQRATRLAGTTEPLSFAASPDARTVAFRGYAYTRTPSPISGALMTHYDESKPQVWKVPLRDQIKPDV VVDAPRGGYLVPPAQAALVGEKLRLHGIQFTTIGTAAQRPVQTFRADAVKFAARSNESHQTVELSGQWRNETRSVPAGSL FVPIAQPKARLVMAILEPQAPDSLLQWGFFNTAFERKEYMEAYVAEEVARDMLANDAALKAQFEQRIASDPDFSNNPQAR LEFFAKRHTSWDERYQLYPVLRTAQTDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65504; Mature: 65373
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRFTRLALSLLLLTSAPAALAAAPLTTQAERSGFIQTGRYDEVIALCDAFAQRYPQAVR CCHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHCCCEECCCHHHHHHHHHHHHHHCHHHHH CIQFGTTPEGRPMKALIVSTSGALDAQSAAQRKLPVVLVQGGIHAGEIDGKDAGFLALRE HEECCCCCCCCCEEEEEEECCCCCCHHHHHHCCCCEEEEECCCEECCCCCCCHHHHHHHH LLDGKAGHGVLDKLVWVFVPVFNVDGHERFGAWNRPNQRGPEQMGWRTTAQNLNLNRDYV HHCCCCCCHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCHHHCCCHHHHCCCCCCHHH KADAPEMQAMLQLVQQWDPLMYVDLHVTDGAKFEHDVSVQVEPVHAGDAGLQRDGTRWRD CCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHH AVLADLKKQGSLPLPYYPSFVHEDDPSSGFADDVSPPRFSHGYFLLRNRFGMLVETHSWK HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCC DYPTRVRITRNAIVSVLQQAARHGTQWRADALAADQRATRLAGTTEPLSFAASPDARTVA CCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEE FRGYAYTRTPSPISGALMTHYDESKPQVWKVPLRDQIKPDVVVDAPRGGYLVPPAQAALV EECEEEECCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCCEEEECCCCCEECCCHHHHHH GEKLRLHGIQFTTIGTAAQRPVQTFRADAVKFAARSNESHQTVELSGQWRNETRSVPAGS CCHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCC LFVPIAQPKARLVMAILEPQAPDSLLQWGFFNTAFERKEYMEAYVAEEVARDMLANDAAL EEEECCCCHHHEEEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH KAQFEQRIASDPDFSNNPQARLEFFAKRHTSWDERYQLYPVLRTAQTDF HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHEEEEHHHHHCCCCC >Mature Secondary Structure PRFTRLALSLLLLTSAPAALAAAPLTTQAERSGFIQTGRYDEVIALCDAFAQRYPQAVR CHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHCCCEECCCHHHHHHHHHHHHHHCHHHHH CIQFGTTPEGRPMKALIVSTSGALDAQSAAQRKLPVVLVQGGIHAGEIDGKDAGFLALRE HEECCCCCCCCCEEEEEEECCCCCCHHHHHHCCCCEEEEECCCEECCCCCCCHHHHHHHH LLDGKAGHGVLDKLVWVFVPVFNVDGHERFGAWNRPNQRGPEQMGWRTTAQNLNLNRDYV HHCCCCCCHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCHHHCCCHHHHCCCCCCHHH KADAPEMQAMLQLVQQWDPLMYVDLHVTDGAKFEHDVSVQVEPVHAGDAGLQRDGTRWRD CCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHH AVLADLKKQGSLPLPYYPSFVHEDDPSSGFADDVSPPRFSHGYFLLRNRFGMLVETHSWK HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCC DYPTRVRITRNAIVSVLQQAARHGTQWRADALAADQRATRLAGTTEPLSFAASPDARTVA CCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEE FRGYAYTRTPSPISGALMTHYDESKPQVWKVPLRDQIKPDVVVDAPRGGYLVPPAQAALV EECEEEECCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCCEEEECCCCCEECCCHHHHHH GEKLRLHGIQFTTIGTAAQRPVQTFRADAVKFAARSNESHQTVELSGQWRNETRSVPAGS CCHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCC LFVPIAQPKARLVMAILEPQAPDSLLQWGFFNTAFERKEYMEAYVAEEVARDMLANDAAL EEEECCCCHHHEEEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH KAQFEQRIASDPDFSNNPQARLEFFAKRHTSWDERYQLYPVLRTAQTDF HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHEEEEHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA