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The map label for this gene is papD1

Identifier: 78047036

GI number: 78047036

Start: 1663344

End: 1664069

Strand: Reverse

Name: papD1

Synonym: XCV1480

Alternate gene names: NA

Gene position: 1664069-1663344 (Counterclockwise)

Preceding gene: 78047037

Following gene: 78047035

Centisome position: 32.13

GC content: 69.15

Gene sequence:

>726_bases
ATGGCCACTGCTTGCCACCTTCGCGATCTGTTGGCCTGGGCCCTGGCCCTGGGCTGTATGGCAGCAAGCGGGGCCGCCAG
TGCTGCCGAGATCGCCATCGCGCCGACCACCGCGCACATCCCGGCCGACAGCGACCAGGCAACGGTCTGGCTCTACAACC
AGGCCGCGCAACCCTGGCGTGCCGACGCCAAGCTCTACCGCTGGCGCCAGGACGGTGAGCGCGAACTCCTCGAGCCAGCC
ACCGGCGTCACGGTCAGCCCGTCGCACTTCGAAATTCCGTCGCAAGGCCGGCAGCTGTTGCGCGTGATCCGCCTCGGCCC
CAGCCCCACGCAGGCCGAAGACAGCTACCGGCTCGTGGTGACCCAGCACGCGATCGGCAACGAGACCGACCTGCTGCGTT
ATTCCACCCCGGTGTTTGCACAGCCCAGCCAGGCCAGTGCAGCGCAACCGGCGTTGCACGCCAGCCTGGCCGGGCACGGC
AGCCAGCGCGCGTTGCGTATCCACAATTCCGGCTCCAGCCATGCGCGCCTGGCCGACCTGGCCTATATCGATGCCGGCGG
CACCCGCCGCAACATCCGCGGCGACCTGGCCGGCTACGTCCTCCCCGGCCAGACCCGCCAATGGGCCCTGCCCGCCAACC
TGCCCGCAGGCAGTGGCCGCTTCGTGGCGCGTATCAACAGCGATATCGAAAGCACGTTGGCGCTGGAGCCGGGAATCGGG
AATTGA

Upstream 100 bases:

>100_bases
ATGAGGCACCCGCCGTCACCAGCACCGGCCAGGACGCCAGCGCGCTTGGCGGGCCGCTGCCCGCCGGCAGCGCGCGCATC
ACCACCATCGCGTTCTGAGC

Downstream 100 bases:

>100_bases
GAATTGGGAATGGGTCAAGCCGATTGCGCTAGCTGATCGTGGGCTGGTGAAGGCCCAAGCGAACCGGGCTCTGCGATTCC
CGATTCCCGATTCCCGATTC

Product: pili assembly chaperone

Products: NA

Alternate protein names: P Pilus Assembly Protein Chaperone PapD-Like Protein; P Pilus Assembly Protein Chaperone PapD-Like; Exported Fimbriae-Related Chaperone; Pilus Assembly Protein; Pili Assembly Chaperone Transmembrane Protein; Putataive Fimbrial Chaperone Protein; Pili Assembly Chaperone Transmembrane Protein Papd-Like; Fimbriae Chaperone; Fimbrial Chaperone Protein; P Pilus Assembly Protein Chaperone PapD; Pili Assembly Chaperone Protein

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MATACHLRDLLAWALALGCMAASGAASAAEIAIAPTTAHIPADSDQATVWLYNQAAQPWRADAKLYRWRQDGERELLEPA
TGVTVSPSHFEIPSQGRQLLRVIRLGPSPTQAEDSYRLVVTQHAIGNETDLLRYSTPVFAQPSQASAAQPALHASLAGHG
SQRALRIHNSGSSHARLADLAYIDAGGTRRNIRGDLAGYVLPGQTRQWALPANLPAGSGRFVARINSDIESTLALEPGIG
N

Sequences:

>Translated_241_residues
MATACHLRDLLAWALALGCMAASGAASAAEIAIAPTTAHIPADSDQATVWLYNQAAQPWRADAKLYRWRQDGERELLEPA
TGVTVSPSHFEIPSQGRQLLRVIRLGPSPTQAEDSYRLVVTQHAIGNETDLLRYSTPVFAQPSQASAAQPALHASLAGHG
SQRALRIHNSGSSHARLADLAYIDAGGTRRNIRGDLAGYVLPGQTRQWALPANLPAGSGRFVARINSDIESTLALEPGIG
N
>Mature_240_residues
ATACHLRDLLAWALALGCMAASGAASAAEIAIAPTTAHIPADSDQATVWLYNQAAQPWRADAKLYRWRQDGERELLEPAT
GVTVSPSHFEIPSQGRQLLRVIRLGPSPTQAEDSYRLVVTQHAIGNETDLLRYSTPVFAQPSQASAAQPALHASLAGHGS
QRALRIHNSGSSHARLADLAYIDAGGTRRNIRGDLAGYVLPGQTRQWALPANLPAGSGRFVARINSDIESTLALEPGIGN

Specific function: Unknown

COG id: COG3121

COG function: function code NU; P pilus assembly protein, chaperone PapD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25668; Mature: 25537

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATACHLRDLLAWALALGCMAASGAASAAEIAIAPTTAHIPADSDQATVWLYNQAAQPWR
CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEECCCCCCCEEEEEECCCCCCCC
ADAKLYRWRQDGERELLEPATGVTVSPSHFEIPSQGRQLLRVIRLGPSPTQAEDSYRLVV
CCHHHHHHHCCCCHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEE
TQHAIGNETDLLRYSTPVFAQPSQASAAQPALHASLAGHGSQRALRIHNSGSSHARLADL
EECCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCEEEEE
AYIDAGGTRRNIRGDLAGYVLPGQTRQWALPANLPAGSGRFVARINSDIESTLALEPGIG
EEEECCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCEEEEEECCCCHHEEEECCCCC
N
C
>Mature Secondary Structure 
ATACHLRDLLAWALALGCMAASGAASAAEIAIAPTTAHIPADSDQATVWLYNQAAQPWR
CCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEECCCCCCCEEEEEECCCCCCCC
ADAKLYRWRQDGERELLEPATGVTVSPSHFEIPSQGRQLLRVIRLGPSPTQAEDSYRLVV
CCHHHHHHHCCCCHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEE
TQHAIGNETDLLRYSTPVFAQPSQASAAQPALHASLAGHGSQRALRIHNSGSSHARLADL
EECCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCEEEEE
AYIDAGGTRRNIRGDLAGYVLPGQTRQWALPANLPAGSGRFVARINSDIESTLALEPGIG
EEEECCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCEEEEEECCCCHHEEEECCCCC
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA