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The map label for this gene is fliF [H]

Identifier: 78045011

GI number: 78045011

Start: 876975

End: 878561

Strand: Direct

Name: fliF [H]

Synonym: CHY_0993

Alternate gene names: 78045011

Gene position: 876975-878561 (Clockwise)

Preceding gene: 78044773

Following gene: 78044850

Centisome position: 36.52

GC content: 47.32

Gene sequence:

>1587_bases
ATGGATTTTCAGAGCCTCCTGGCAAGTATAAAGGAACGTTTCCAAAATTTAAGCAGCTTTCAAAAGCGGGCTTACGGGAT
TTTAATACTTACGGCGGTACTGTCGTTGTTGCTCGGGTATATTTTTTTGGGACGTCCCAGTTATACTCCTTTGGCTACCG
GTTTAGATGCCAAAGAAGCGGGAGCCATTGCGGAAAAGTTGAAGGAATGGAAAATAAATTACAAGCTTGGCGATGAGGGG
ACAACGATTTTGGTTCCCAAAAGTCAAGTGTATGAGGCCCGGATTAAACTGGCCAGTGCCGGGGTGTTAGAAACCAACAG
CGGTATTGGTTTTGAATTATTTGACCAGACCAAGTTGGGTGCCAGTGATTTTGAAAACCAGGTTAACTACCAGCGAGCGC
TGCAGGAGGAGCTACGGCGGACAATTGTGCAGTTGGATGCGGTGGAGGATGCCCGTGTTCATTTAGTCCTTCCCGAAAAA
AGCGTTTTTATCTCCGAGGAAAAACCGGCAACCGCCAGCATTTTGCTGAAATTAAAGCCCCTAAAAAAATTAACGCCGCA
AGAGATAAAAGGGATAATTTACCTGGTAGCGAACAGTGTAGAAGGTTTAAAGCCGGAAAATGTTCAGGTAGTGGATACAT
ACGGAAATGTGCTCTCTGACCAGGTGGATTTAAGCTCAAGTTTATCAGCGCAATCCGGACGTCAGCAAGAAATGAAAAAG
CAGTTTGAAACGGAGTTAACAAATCGAATTAATAACCTGCTCACCACTATTTTAGGTCCTGGAAAGGCAGTAGTTAGTAT
CAATGCTGATCTGGATTTTAACCAGGAAGAAACTACCTCCCAGATCGCTCTCCCTGGGCCGCTGGTCAGCGAACAGGGGA
GCAAAGAAGTGGTTTACGGAAGCCCTGGTGCTTCCGGAACGGTTGGGACGGGACCAAACACCAATCAAAATTATCCCTAC
ATCAATGGCAGTACGAACGGCGAAGTTCAGGTTAAAGAAGACTTTACCCGCAATTATCAGGTTGGACAAACCGTCTATAA
ATTGGTCAAGGCACCGGGGACGGTGAAGCGGTTATCCGCCGCTATTGCTATCGATTCGGGGGTGCCGGCGGCGGACGTAA
ATAAAATCCGGGACATCGTAGCGGCGGCCATGGGCTATGACCAAAACCGCGGCGACCAGATAATTATCAACACCATTACC
TTTGATAAAACATTGGCAAAACAAATGGAAGAACAGCAGGCGCAAGCTCAGAAGGAACAGCAGGCAAGACAAGCATTGTA
TAAATGGCTTGCCATAGGGGCCGGGGCCCTGGTTTTTCTTAGCATTATAGTATTTTTTGGGATACGCCGTTTTCGGAAAA
AACCTGCGGCAGTTGCGGACATTTCCCCCAGAGCTCCGGTTGGAGTCAGTGAGCTGGAAGCTGCGGCTGCGGCCGAAAGA
GGTCCTGGGATTATTGTAAGAGAAATGACTGCTGAACCGATAGTAATCCAGAAAGTTCAATCGGATATCGAAAAAATAAA
ATCGCTGGTGGACAAAAATCCGGATGAAGTTGCGATGGTACTGCGAGCCTGGCTGACGGACGAGTAA

Upstream 100 bases:

>100_bases
GTTTGGAATTAGCGGTGGAGGTTCGCAACAAAATAGTTGAGGCCTATCAGGAAATTAGCCGGATGCAGATTTAATCATGG
ACGGGAATAGGGGGAAATAA

Downstream 100 bases:

>100_bases
GACAGACAAGGAGGAGGCCAGATGGCCAGGGAAGAAACACGCAAGAAAAATATCAATAAAATAGCCAAGCTTCTAATTGC
CCTGGGGCCGGAACATTCGG

Product: flagellar MS-ring protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 528; Mature: 528

Protein sequence:

>528_residues
MDFQSLLASIKERFQNLSSFQKRAYGILILTAVLSLLLGYIFLGRPSYTPLATGLDAKEAGAIAEKLKEWKINYKLGDEG
TTILVPKSQVYEARIKLASAGVLETNSGIGFELFDQTKLGASDFENQVNYQRALQEELRRTIVQLDAVEDARVHLVLPEK
SVFISEEKPATASILLKLKPLKKLTPQEIKGIIYLVANSVEGLKPENVQVVDTYGNVLSDQVDLSSSLSAQSGRQQEMKK
QFETELTNRINNLLTTILGPGKAVVSINADLDFNQEETTSQIALPGPLVSEQGSKEVVYGSPGASGTVGTGPNTNQNYPY
INGSTNGEVQVKEDFTRNYQVGQTVYKLVKAPGTVKRLSAAIAIDSGVPAADVNKIRDIVAAAMGYDQNRGDQIIINTIT
FDKTLAKQMEEQQAQAQKEQQARQALYKWLAIGAGALVFLSIIVFFGIRRFRKKPAAVADISPRAPVGVSELEAAAAAER
GPGIIVREMTAEPIVIQKVQSDIEKIKSLVDKNPDEVAMVLRAWLTDE

Sequences:

>Translated_528_residues
MDFQSLLASIKERFQNLSSFQKRAYGILILTAVLSLLLGYIFLGRPSYTPLATGLDAKEAGAIAEKLKEWKINYKLGDEG
TTILVPKSQVYEARIKLASAGVLETNSGIGFELFDQTKLGASDFENQVNYQRALQEELRRTIVQLDAVEDARVHLVLPEK
SVFISEEKPATASILLKLKPLKKLTPQEIKGIIYLVANSVEGLKPENVQVVDTYGNVLSDQVDLSSSLSAQSGRQQEMKK
QFETELTNRINNLLTTILGPGKAVVSINADLDFNQEETTSQIALPGPLVSEQGSKEVVYGSPGASGTVGTGPNTNQNYPY
INGSTNGEVQVKEDFTRNYQVGQTVYKLVKAPGTVKRLSAAIAIDSGVPAADVNKIRDIVAAAMGYDQNRGDQIIINTIT
FDKTLAKQMEEQQAQAQKEQQARQALYKWLAIGAGALVFLSIIVFFGIRRFRKKPAAVADISPRAPVGVSELEAAAAAER
GPGIIVREMTAEPIVIQKVQSDIEKIKSLVDKNPDEVAMVLRAWLTDE
>Mature_528_residues
MDFQSLLASIKERFQNLSSFQKRAYGILILTAVLSLLLGYIFLGRPSYTPLATGLDAKEAGAIAEKLKEWKINYKLGDEG
TTILVPKSQVYEARIKLASAGVLETNSGIGFELFDQTKLGASDFENQVNYQRALQEELRRTIVQLDAVEDARVHLVLPEK
SVFISEEKPATASILLKLKPLKKLTPQEIKGIIYLVANSVEGLKPENVQVVDTYGNVLSDQVDLSSSLSAQSGRQQEMKK
QFETELTNRINNLLTTILGPGKAVVSINADLDFNQEETTSQIALPGPLVSEQGSKEVVYGSPGASGTVGTGPNTNQNYPY
INGSTNGEVQVKEDFTRNYQVGQTVYKLVKAPGTVKRLSAAIAIDSGVPAADVNKIRDIVAAAMGYDQNRGDQIIINTIT
FDKTLAKQMEEQQAQAQKEQQARQALYKWLAIGAGALVFLSIIVFFGIRRFRKKPAAVADISPRAPVGVSELEAAAAAER
GPGIIVREMTAEPIVIQKVQSDIEKIKSLVDKNPDEVAMVLRAWLTDE

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=548, Percent_Identity=29.5620437956204, Blast_Score=182, Evalue=3e-47,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 57657; Mature: 57657

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFQSLLASIKERFQNLSSFQKRAYGILILTAVLSLLLGYIFLGRPSYTPLATGLDAKEA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHH
GAIAEKLKEWKINYKLGDEGTTILVPKSQVYEARIKLASAGVLETNSGIGFELFDQTKLG
HHHHHHHHHHEEEEEECCCCCEEEECCHHHHHHHHHHHHCCEEECCCCCCEEEECCCCCC
ASDFENQVNYQRALQEELRRTIVQLDAVEDARVHLVLPEKSVFISEEKPATASILLKLKP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCCCCEEEEEEECC
LKKLTPQEIKGIIYLVANSVEGLKPENVQVVDTYGNVLSDQVDLSSSLSAQSGRQQEMKK
HHHCCHHHHCEEEEEEECCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHH
QFETELTNRINNLLTTILGPGKAVVSINADLDFNQEETTSQIALPGPLVSEQGSKEVVYG
HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCEEEEE
SPGASGTVGTGPNTNQNYPYINGSTNGEVQVKEDFTRNYQVGQTVYKLVKAPGTVKRLSA
CCCCCCCCCCCCCCCCCCCEECCCCCCCEEECCHHCCCCHHHHHHHHHHHCCCHHHHHHH
AIAIDSGVPAADVNKIRDIVAAAMGYDQNRGDQIIINTITFDKTLAKQMEEQQAQAQKEQ
HEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHH
QARQALYKWLAIGAGALVFLSIIVFFGIRRFRKKPAAVADISPRAPVGVSELEAAAAAER
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHCC
GPGIIVREMTAEPIVIQKVQSDIEKIKSLVDKNPDEVAMVLRAWLTDE
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDFQSLLASIKERFQNLSSFQKRAYGILILTAVLSLLLGYIFLGRPSYTPLATGLDAKEA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHH
GAIAEKLKEWKINYKLGDEGTTILVPKSQVYEARIKLASAGVLETNSGIGFELFDQTKLG
HHHHHHHHHHEEEEEECCCCCEEEECCHHHHHHHHHHHHCCEEECCCCCCEEEECCCCCC
ASDFENQVNYQRALQEELRRTIVQLDAVEDARVHLVLPEKSVFISEEKPATASILLKLKP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCCCCEEEEEEECC
LKKLTPQEIKGIIYLVANSVEGLKPENVQVVDTYGNVLSDQVDLSSSLSAQSGRQQEMKK
HHHCCHHHHCEEEEEEECCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHH
QFETELTNRINNLLTTILGPGKAVVSINADLDFNQEETTSQIALPGPLVSEQGSKEVVYG
HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCEEEEE
SPGASGTVGTGPNTNQNYPYINGSTNGEVQVKEDFTRNYQVGQTVYKLVKAPGTVKRLSA
CCCCCCCCCCCCCCCCCCCEECCCCCCCEEECCHHCCCCHHHHHHHHHHHCCCHHHHHHH
AIAIDSGVPAADVNKIRDIVAAAMGYDQNRGDQIIINTITFDKTLAKQMEEQQAQAQKEQ
HEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHH
QARQALYKWLAIGAGALVFLSIIVFFGIRRFRKKPAAVADISPRAPVGVSELEAAAAAER
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHCC
GPGIIVREMTAEPIVIQKVQSDIEKIKSLVDKNPDEVAMVLRAWLTDE
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]