Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

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The map label for this gene is 78044726

Identifier: 78044726

GI number: 78044726

Start: 1142096

End: 1142857

Strand: Direct

Name: 78044726

Synonym: CHY_1282

Alternate gene names: NA

Gene position: 1142096-1142857 (Clockwise)

Preceding gene: 78042656

Following gene: 78045057

Centisome position: 47.56

GC content: 40.68

Gene sequence:

>762_bases
ATGAATGAAAAAAAGCTTCGTCAATTACTTATTAGCATTCAAAATAAAGAAATTAGTATAGATGAAGGAATAGCAAGATT
AAAAGGTTTACCGTTTGATGATTTAGGCTTTGCAAAAGTTGATCATCACCGGCAATTACGCCAGGGGTTTCCTGAAGTCG
TTTATTGTGCGGGAAAAACCAAGGAGCAGATAGTAGCAATAATGGAAAACCTGGTAAATAAATCAGAAAATAATATTTTA
GCAACAAGAGCATCACGGGAAGTTTATGAAGCGGTAGCTAAAAAAATACCGGATGCGGTGTATTACGAATTAGCAAGGGC
TATAGTAGTCTGGCGGGGAGAACAAGAAAAACGAGGGCATATACTGGTTATAAGTGCGGGAACTTCCGATATTCCGGTAG
CCGAGGAAGCAGTAATAACAGCAGAAGTTATGGGAAACCGGGTGGAACGTCTTTATGATACGGGAGTTGCCGGAATTCAT
CGCTTGTTAAGTCAAAAAGAGAAACTATTTGCAGCAAGAGTTTTAATTGTAGTAGCCGGAATGGAAGGAGCCTTAGCCAG
TGTAGTTGCCGGATTAGTAGACAAGCCGGTAATAGCAGTACCAACAAGTGTTGGTTATGGAGCAAATTTTGGGGGACTTT
CGGCTTTGCTTACTATGCTTAACAGCTGTGCCAGTGGAGTCGGTGTGGTGAATATTGATAATGGTTTTGGAGCCGGATAT
TTAGCAAGTTTAATAAATCGATTGGGAGAGGTTGAGTCATGA

Upstream 100 bases:

>100_bases
GAGAAGTTAAAAGACTGCGGTTTTACCTATGTAACATTGGATCTTGAAGGTTATCGAACCGGAAGTATGAATGAACCTCT
TTTAAGAAAGGGCGAACTTT

Downstream 100 bases:

>100_bases
AAATTGCCTATTTTCATTGTTTTGCCGGAATAAGTGGTGACATGATTTTAGGAGCTTTAATTGATGCAGGGTTGGATTTT
GAACAATTAAAAGCTGACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MNEKKLRQLLISIQNKEISIDEGIARLKGLPFDDLGFAKVDHHRQLRQGFPEVVYCAGKTKEQIVAIMENLVNKSENNIL
ATRASREVYEAVAKKIPDAVYYELARAIVVWRGEQEKRGHILVISAGTSDIPVAEEAVITAEVMGNRVERLYDTGVAGIH
RLLSQKEKLFAARVLIVVAGMEGALASVVAGLVDKPVIAVPTSVGYGANFGGLSALLTMLNSCASGVGVVNIDNGFGAGY
LASLINRLGEVES

Sequences:

>Translated_253_residues
MNEKKLRQLLISIQNKEISIDEGIARLKGLPFDDLGFAKVDHHRQLRQGFPEVVYCAGKTKEQIVAIMENLVNKSENNIL
ATRASREVYEAVAKKIPDAVYYELARAIVVWRGEQEKRGHILVISAGTSDIPVAEEAVITAEVMGNRVERLYDTGVAGIH
RLLSQKEKLFAARVLIVVAGMEGALASVVAGLVDKPVIAVPTSVGYGANFGGLSALLTMLNSCASGVGVVNIDNGFGAGY
LASLINRLGEVES
>Mature_253_residues
MNEKKLRQLLISIQNKEISIDEGIARLKGLPFDDLGFAKVDHHRQLRQGFPEVVYCAGKTKEQIVAIMENLVNKSENNIL
ATRASREVYEAVAKKIPDAVYYELARAIVVWRGEQEKRGHILVISAGTSDIPVAEEAVITAEVMGNRVERLYDTGVAGIH
RLLSQKEKLFAARVLIVVAGMEGALASVVAGLVDKPVIAVPTSVGYGANFGGLSALLTMLNSCASGVGVVNIDNGFGAGY
LASLINRLGEVES

Specific function: Unknown

COG id: COG1691

COG function: function code R; NCAIR mutase (PurE)-related proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000031 [H]

Pfam domain/function: PF00731 AIRC [H]

EC number: NA

Molecular weight: Translated: 27229; Mature: 27229

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEKKLRQLLISIQNKEISIDEGIARLKGLPFDDLGFAKVDHHRQLRQGFPEVVYCAGKT
CCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCC
KEQIVAIMENLVNKSENNILATRASREVYEAVAKKIPDAVYYELARAIVVWRGEQEKRGH
HHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC
ILVISAGTSDIPVAEEAVITAEVMGNRVERLYDTGVAGIHRLLSQKEKLFAARVLIVVAG
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MEGALASVVAGLVDKPVIAVPTSVGYGANFGGLSALLTMLNSCASGVGVVNIDNGFGAGY
CCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHH
LASLINRLGEVES
HHHHHHHHCCCCC
>Mature Secondary Structure
MNEKKLRQLLISIQNKEISIDEGIARLKGLPFDDLGFAKVDHHRQLRQGFPEVVYCAGKT
CCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCC
KEQIVAIMENLVNKSENNILATRASREVYEAVAKKIPDAVYYELARAIVVWRGEQEKRGH
HHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC
ILVISAGTSDIPVAEEAVITAEVMGNRVERLYDTGVAGIHRLLSQKEKLFAARVLIVVAG
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MEGALASVVAGLVDKPVIAVPTSVGYGANFGGLSALLTMLNSCASGVGVVNIDNGFGAGY
CCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHH
LASLINRLGEVES
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]