Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
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Accession | NC_007503 |
Length | 2,401,520 |
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The map label for this gene is 78044726
Identifier: 78044726
GI number: 78044726
Start: 1142096
End: 1142857
Strand: Direct
Name: 78044726
Synonym: CHY_1282
Alternate gene names: NA
Gene position: 1142096-1142857 (Clockwise)
Preceding gene: 78042656
Following gene: 78045057
Centisome position: 47.56
GC content: 40.68
Gene sequence:
>762_bases ATGAATGAAAAAAAGCTTCGTCAATTACTTATTAGCATTCAAAATAAAGAAATTAGTATAGATGAAGGAATAGCAAGATT AAAAGGTTTACCGTTTGATGATTTAGGCTTTGCAAAAGTTGATCATCACCGGCAATTACGCCAGGGGTTTCCTGAAGTCG TTTATTGTGCGGGAAAAACCAAGGAGCAGATAGTAGCAATAATGGAAAACCTGGTAAATAAATCAGAAAATAATATTTTA GCAACAAGAGCATCACGGGAAGTTTATGAAGCGGTAGCTAAAAAAATACCGGATGCGGTGTATTACGAATTAGCAAGGGC TATAGTAGTCTGGCGGGGAGAACAAGAAAAACGAGGGCATATACTGGTTATAAGTGCGGGAACTTCCGATATTCCGGTAG CCGAGGAAGCAGTAATAACAGCAGAAGTTATGGGAAACCGGGTGGAACGTCTTTATGATACGGGAGTTGCCGGAATTCAT CGCTTGTTAAGTCAAAAAGAGAAACTATTTGCAGCAAGAGTTTTAATTGTAGTAGCCGGAATGGAAGGAGCCTTAGCCAG TGTAGTTGCCGGATTAGTAGACAAGCCGGTAATAGCAGTACCAACAAGTGTTGGTTATGGAGCAAATTTTGGGGGACTTT CGGCTTTGCTTACTATGCTTAACAGCTGTGCCAGTGGAGTCGGTGTGGTGAATATTGATAATGGTTTTGGAGCCGGATAT TTAGCAAGTTTAATAAATCGATTGGGAGAGGTTGAGTCATGA
Upstream 100 bases:
>100_bases GAGAAGTTAAAAGACTGCGGTTTTACCTATGTAACATTGGATCTTGAAGGTTATCGAACCGGAAGTATGAATGAACCTCT TTTAAGAAAGGGCGAACTTT
Downstream 100 bases:
>100_bases AAATTGCCTATTTTCATTGTTTTGCCGGAATAAGTGGTGACATGATTTTAGGAGCTTTAATTGATGCAGGGTTGGATTTT GAACAATTAAAAGCTGACTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MNEKKLRQLLISIQNKEISIDEGIARLKGLPFDDLGFAKVDHHRQLRQGFPEVVYCAGKTKEQIVAIMENLVNKSENNIL ATRASREVYEAVAKKIPDAVYYELARAIVVWRGEQEKRGHILVISAGTSDIPVAEEAVITAEVMGNRVERLYDTGVAGIH RLLSQKEKLFAARVLIVVAGMEGALASVVAGLVDKPVIAVPTSVGYGANFGGLSALLTMLNSCASGVGVVNIDNGFGAGY LASLINRLGEVES
Sequences:
>Translated_253_residues MNEKKLRQLLISIQNKEISIDEGIARLKGLPFDDLGFAKVDHHRQLRQGFPEVVYCAGKTKEQIVAIMENLVNKSENNIL ATRASREVYEAVAKKIPDAVYYELARAIVVWRGEQEKRGHILVISAGTSDIPVAEEAVITAEVMGNRVERLYDTGVAGIH RLLSQKEKLFAARVLIVVAGMEGALASVVAGLVDKPVIAVPTSVGYGANFGGLSALLTMLNSCASGVGVVNIDNGFGAGY LASLINRLGEVES >Mature_253_residues MNEKKLRQLLISIQNKEISIDEGIARLKGLPFDDLGFAKVDHHRQLRQGFPEVVYCAGKTKEQIVAIMENLVNKSENNIL ATRASREVYEAVAKKIPDAVYYELARAIVVWRGEQEKRGHILVISAGTSDIPVAEEAVITAEVMGNRVERLYDTGVAGIH RLLSQKEKLFAARVLIVVAGMEGALASVVAGLVDKPVIAVPTSVGYGANFGGLSALLTMLNSCASGVGVVNIDNGFGAGY LASLINRLGEVES
Specific function: Unknown
COG id: COG1691
COG function: function code R; NCAIR mutase (PurE)-related proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000031 [H]
Pfam domain/function: PF00731 AIRC [H]
EC number: NA
Molecular weight: Translated: 27229; Mature: 27229
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEKKLRQLLISIQNKEISIDEGIARLKGLPFDDLGFAKVDHHRQLRQGFPEVVYCAGKT CCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCC KEQIVAIMENLVNKSENNILATRASREVYEAVAKKIPDAVYYELARAIVVWRGEQEKRGH HHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC ILVISAGTSDIPVAEEAVITAEVMGNRVERLYDTGVAGIHRLLSQKEKLFAARVLIVVAG EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC MEGALASVVAGLVDKPVIAVPTSVGYGANFGGLSALLTMLNSCASGVGVVNIDNGFGAGY CCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHH LASLINRLGEVES HHHHHHHHCCCCC >Mature Secondary Structure MNEKKLRQLLISIQNKEISIDEGIARLKGLPFDDLGFAKVDHHRQLRQGFPEVVYCAGKT CCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCC KEQIVAIMENLVNKSENNILATRASREVYEAVAKKIPDAVYYELARAIVVWRGEQEKRGH HHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC ILVISAGTSDIPVAEEAVITAEVMGNRVERLYDTGVAGIHRLLSQKEKLFAARVLIVVAG EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC MEGALASVVAGLVDKPVIAVPTSVGYGANFGGLSALLTMLNSCASGVGVVNIDNGFGAGY CCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHH LASLINRLGEVES HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]