Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
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Accession | NC_007503 |
Length | 2,401,520 |
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The map label for this gene is asd [H]
Identifier: 78044721
GI number: 78044721
Start: 1026108
End: 1027127
Strand: Direct
Name: asd [H]
Synonym: CHY_1154
Alternate gene names: 78044721
Gene position: 1026108-1027127 (Clockwise)
Preceding gene: 78042836
Following gene: 78044009
Centisome position: 42.73
GC content: 41.96
Gene sequence:
>1020_bases TTGAGCTATAATGTGGTAGTAATTGGAGCTACCGGTGCGGTAGGAGGAGAAATTCTAAAAATTTTAGAGGAAAGAAACTT TCCCGTAAAAGAACTTCGACTGGGGGCAACTTCCCGTTCTGCCGGTAAAGAAGTGGTTTTTCGGGGAGAAACGTATAAGG TGTTAGAAACAACACCGGAAATATTTGATGGTATGGATATTGCCTTATTTGCCGGGGGTTCTGCCAGTAAAGAATTTGCC CGCATTGCTGCAGCAAAAGGGGTAACGGTAATTGATAATAGCAGTGCTTTTCGTTTAGAGCCGGACGTACCATTGGTGGT TCCTGAAGTAAATCCCGAGGATGTTAAATGGCACAAAGGTATAATTGCCAATCCCAATTGTTCGACAATCCAGATGGTTG TGGCGTTAAAGCCTTTGCATGATTATGGAAAAATTAAACGGGTGGTTGTTTCGACCTATCAAGCAGTTTCCGGTGCTGGC ATTGAAGCCATAGAAGAATTAAAGCAGCAGGTTAAGGCGTATTTAAACGGTGAAGAGGCGGTACCCAACGTCTTTCCGTA TCCTATTGCTTTTAATTTAATTCCTCACATCGATGTATTCCAGGATATGTATTATACAAAAGAAGAATGGAAAATGGTTT TAGAGACGCAAAAGATAATGCATGATCCGGAAATTAAAGTAACCGCCACAACTGTAAGGGTACCGGTCTTTAGAAGTCAC TCGGAAAGCATTAACATTGAAACGGAAATTAAAATTACCCGGGAGAAAGCTATTGAGCTTTTGAAAAAGGCTCCGGGGGT AAAAGTAATTGACAATCCTGAAGAAAAGCTGTACCCAATGCCCTTGTATGCCTCGGACCAGGATGAGGTTTTTGTGGGAA GAATCCGGGAAGATAATACAATTTCCAATGGCTTAAATCTTTGGGTTGTTGCGGACCAATTACGGAAGGGTGCAGCTACA AATGCTGTTCAGATTGCTGAACTACTAATAAAGTACGGGTGTGTGAAGCAAAATGGCTAA
Upstream 100 bases:
>100_bases TAAATTACTTAGAAGACACTATAAATGAAGCGTTAAAGGGAAGACAAATTCAACCAATGCTTATTACCTATTCTTAATAA CAAATTTGGAGGTGTTATTT
Downstream 100 bases:
>100_bases AAAGTTTATCATTTTAAAGTTTGGCGGAACAAGTTTAAAGACGGCGGAACTCCGGGAAAAGGTAGCCCAAAAAATAATTA ATACTTTTGAATCTGGCTAT
Product: aspartate-semialdehyde dehydrogenase
Products: NA
Alternate protein names: ASA dehydrogenase; ASADH [H]
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MSYNVVVIGATGAVGGEILKILEERNFPVKELRLGATSRSAGKEVVFRGETYKVLETTPEIFDGMDIALFAGGSASKEFA RIAAAKGVTVIDNSSAFRLEPDVPLVVPEVNPEDVKWHKGIIANPNCSTIQMVVALKPLHDYGKIKRVVVSTYQAVSGAG IEAIEELKQQVKAYLNGEEAVPNVFPYPIAFNLIPHIDVFQDMYYTKEEWKMVLETQKIMHDPEIKVTATTVRVPVFRSH SESINIETEIKITREKAIELLKKAPGVKVIDNPEEKLYPMPLYASDQDEVFVGRIREDNTISNGLNLWVVADQLRKGAAT NAVQIAELLIKYGCVKQNG
Sequences:
>Translated_339_residues MSYNVVVIGATGAVGGEILKILEERNFPVKELRLGATSRSAGKEVVFRGETYKVLETTPEIFDGMDIALFAGGSASKEFA RIAAAKGVTVIDNSSAFRLEPDVPLVVPEVNPEDVKWHKGIIANPNCSTIQMVVALKPLHDYGKIKRVVVSTYQAVSGAG IEAIEELKQQVKAYLNGEEAVPNVFPYPIAFNLIPHIDVFQDMYYTKEEWKMVLETQKIMHDPEIKVTATTVRVPVFRSH SESINIETEIKITREKAIELLKKAPGVKVIDNPEEKLYPMPLYASDQDEVFVGRIREDNTISNGLNLWVVADQLRKGAAT NAVQIAELLIKYGCVKQNG >Mature_338_residues SYNVVVIGATGAVGGEILKILEERNFPVKELRLGATSRSAGKEVVFRGETYKVLETTPEIFDGMDIALFAGGSASKEFAR IAAAKGVTVIDNSSAFRLEPDVPLVVPEVNPEDVKWHKGIIANPNCSTIQMVVALKPLHDYGKIKRVVVSTYQAVSGAGI EAIEELKQQVKAYLNGEEAVPNVFPYPIAFNLIPHIDVFQDMYYTKEEWKMVLETQKIMHDPEIKVTATTVRVPVFRSHS ESINIETEIKITREKAIELLKKAPGVKVIDNPEEKLYPMPLYASDQDEVFVGRIREDNTISNGLNLWVVADQLRKGAATN AVQIAELLIKYGCVKQNG
Specific function: Unknown
COG id: COG0136
COG function: function code E; Aspartate-semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate-semialdehyde dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788658, Length=338, Percent_Identity=35.207100591716, Blast_Score=181, Evalue=8e-47, Organism=Escherichia coli, GI1789841, Length=357, Percent_Identity=28.5714285714286, Blast_Score=93, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6320362, Length=393, Percent_Identity=31.5521628498728, Blast_Score=107, Evalue=4e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000319 - InterPro: IPR012080 - InterPro: IPR005986 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 [H]
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC [H]
EC number: =1.2.1.11 [H]
Molecular weight: Translated: 37513; Mature: 37381
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYNVVVIGATGAVGGEILKILEERNFPVKELRLGATSRSAGKEVVFRGETYKVLETTPE CCEEEEEEECCCCCHHHHHHHHHHCCCCHHHHEECCCCCCCCCEEEEECCEEEEEECCHH IFDGMDIALFAGGSASKEFARIAAAKGVTVIDNSSAFRLEPDVPLVVPEVNPEDVKWHKG HHCCCEEEEEECCCCHHHHHHHHHHCCEEEEECCCEEEECCCCCEEECCCCCCCCHHCCC IIANPNCSTIQMVVALKPLHDYGKIKRVVVSTYQAVSGAGIEAIEELKQQVKAYLNGEEA EEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC VPNVFPYPIAFNLIPHIDVFQDMYYTKEEWKMVLETQKIMHDPEIKVTATTVRVPVFRSH CCCCCCCCEEEECCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEECC SESINIETEIKITREKAIELLKKAPGVKVIDNPEEKLYPMPLYASDQDEVFVGRIREDNT CCCCCEEEEEEECHHHHHHHHHHCCCCEEEECCHHHEECCCEECCCCCCEEEEEECCCCC ISNGLNLWVVADQLRKGAATNAVQIAELLIKYGCVKQNG CCCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SYNVVVIGATGAVGGEILKILEERNFPVKELRLGATSRSAGKEVVFRGETYKVLETTPE CEEEEEEECCCCCHHHHHHHHHHCCCCHHHHEECCCCCCCCCEEEEECCEEEEEECCHH IFDGMDIALFAGGSASKEFARIAAAKGVTVIDNSSAFRLEPDVPLVVPEVNPEDVKWHKG HHCCCEEEEEECCCCHHHHHHHHHHCCEEEEECCCEEEECCCCCEEECCCCCCCCHHCCC IIANPNCSTIQMVVALKPLHDYGKIKRVVVSTYQAVSGAGIEAIEELKQQVKAYLNGEEA EEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC VPNVFPYPIAFNLIPHIDVFQDMYYTKEEWKMVLETQKIMHDPEIKVTATTVRVPVFRSH CCCCCCCCEEEECCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEECC SESINIETEIKITREKAIELLKKAPGVKVIDNPEEKLYPMPLYASDQDEVFVGRIREDNT CCCCCEEEEEEECHHHHHHHHHHCCCCEEEECCHHHEECCCEECCCCCCEEEEEECCCCC ISNGLNLWVVADQLRKGAATNAVQIAELLIKYGCVKQNG CCCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]