Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
---|---|
Accession | NC_007503 |
Length | 2,401,520 |
Click here to switch to the map view.
The map label for this gene is 78044648
Identifier: 78044648
GI number: 78044648
Start: 1109358
End: 1109729
Strand: Direct
Name: 78044648
Synonym: CHY_1244
Alternate gene names: NA
Gene position: 1109358-1109729 (Clockwise)
Preceding gene: 78044927
Following gene: 78044183
Centisome position: 46.19
GC content: 39.52
Gene sequence:
>372_bases ATGAATATGGAAACTTACCTGAATCTTGGCGCCTACTTACCAAAAAATCTTGAACTTTACTGGGAAAAGATAAAGGAAAA ACCCCTAACTGAACAAATAAAATACGTAACAGCGGATTTAAAAAACGGCCTTAGCGGTGAGTACTGGTATTTATTGGGAA TTTTATACGATCTTGCTGGTGAGTTTTCAAAAGCTTTTCGGGCCTTTGAAAAAGCAGAACCATTTCTTCAAGATAAAATT TTTAATTATTATCCCCATCATCCCCGTGGCTACCGCAGAGAAGGTCTTTCTTTATGTGATGTGGCGTGTGGTGCCTGCTT GTTAGACACCTGCTGCGAATGCATGGGAGGAGATTTCATTTCGTGCTGTTAA
Upstream 100 bases:
>100_bases GATTTAAATAACAGGTTTGCTCCGGAAATGATAGTTGTCTTACAAAATAGTTACATCAAAGCTATTGAGCTATTTTTAAA AAACTTATCCCTAAGGGAGG
Downstream 100 bases:
>100_bases AGAAAGATCTTATGGCAACTTTTCTTGGAAGTTTGGCTTTTTTAGCAACATTTGTTGCAGAATATTTTCACATCGCTCCA AGGGTAATAGGCATTGGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MNMETYLNLGAYLPKNLELYWEKIKEKPLTEQIKYVTADLKNGLSGEYWYLLGILYDLAGEFSKAFRAFEKAEPFLQDKI FNYYPHHPRGYRREGLSLCDVACGACLLDTCCECMGGDFISCC
Sequences:
>Translated_123_residues MNMETYLNLGAYLPKNLELYWEKIKEKPLTEQIKYVTADLKNGLSGEYWYLLGILYDLAGEFSKAFRAFEKAEPFLQDKI FNYYPHHPRGYRREGLSLCDVACGACLLDTCCECMGGDFISCC >Mature_123_residues MNMETYLNLGAYLPKNLELYWEKIKEKPLTEQIKYVTADLKNGLSGEYWYLLGILYDLAGEFSKAFRAFEKAEPFLQDKI FNYYPHHPRGYRREGLSLCDVACGACLLDTCCECMGGDFISCC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14179; Mature: 14179
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS50005 TPR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 6.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 8.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMETYLNLGAYLPKNLELYWEKIKEKPLTEQIKYVTADLKNGLSGEYWYLLGILYDLAG CCCHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH EFSKAFRAFEKAEPFLQDKIFNYYPHHPRGYRREGLSLCDVACGACLLDTCCECMGGDFI HHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCC SCC CCC >Mature Secondary Structure MNMETYLNLGAYLPKNLELYWEKIKEKPLTEQIKYVTADLKNGLSGEYWYLLGILYDLAG CCCHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH EFSKAFRAFEKAEPFLQDKIFNYYPHHPRGYRREGLSLCDVACGACLLDTCCECMGGDFI HHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCC SCC CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA