| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is fusA1 [H]
Identifier: 78044525
GI number: 78044525
Start: 849185
End: 851203
Strand: Direct
Name: fusA1 [H]
Synonym: CHY_0961
Alternate gene names: 78044525
Gene position: 849185-851203 (Clockwise)
Preceding gene: 78044029
Following gene: 78045015
Centisome position: 35.36
GC content: 44.97
Gene sequence:
>2019_bases ATGAAAAGCTACCCTACAGAGTTTTTAAGAAACATCGGTATCTTTGCCCACAGCGGGGCGGGCAAAACCAGTCTTACCGA AGCTTTACTTTACAATACTGGAGTATTGAAAAGAATGGGCCGGGTGGAGGACGGAAATACTGTTTCTGATTACCACCCCG AGGAAATTAAAAGGAAGGTGACCATTCACGCTTCCCTTGTGCCCTGCGAGTGGAACAACCATAAGTTAAACTTTATCGAT ACTCCGGGATATGCGGATTTTATCGGTGAGGTAAAAAGTGTTTTAAAAGTTGTAGAAGGGGCAATATTTGTGGTTTGCGC GGCGTCCGGCGTGGAGATTCAGACGGAAGTGGTCTGGAATCTTGCAGACAATGCTGGTTTGCCGCGTTTTGTGTTTATTA ACAAAATAGAACGGGAAAATGCCAATTTTGAAAAAACGTTAAATCAGATCCGGGAGATTCTTTCGGCTAAAGTAGTACCC CTTCATTTACCGATTGGCGAAGGGGAAAACTTTAAAGGATATATTGATGTTTTAAAAAATAAAGCTTACTTCTTTGATGG TACCAATTTAACGGAAGGGGCTATCCCCGCCGAGTATGAAGAACGAGTTTTAGAAGCCTGGCTGCAATTAACGGAAGCTG CGGCGGAAAATGATGATGAGCTATTAATGATGTATTTGGATGGAGCGGAACTGACCCCTGAGCAGGTTGCACTGGGGCTC AAAAAAGGGGTACGGGCCGGCAAACTTTACCCGCTTTTTGTGGGCTCTGCCACAAAAAATATCGGCATTAGAGATTTATT GGATGCTTCCTGTGAACTGCTGCCGCCTCCCCAAAAAAATTATGATCACCCGGTGGCTTATGTGTTTAAAACCTTAGCTG ACCCGTATGTAGGCAGGATTAACTTTGTTAAAGTTTTGGGGGGTTCTTTAAAGCCAGAAACTACACTCTATAACTTTAAA AAAGATAAACCGGAAAAAATCGGCCATATCCTTTTTATGCGAGGCAAAGATCAAGTTCAAAGCCAGGAGGTAAATGCCGG AGATATCGCTTGCTTAATAAAGCTTTCCGAAACCGGTACCGGCGATGTTTTGAGTTTAAAAGATAAACCGGTGGAAATTG AACCGGTAGATTATCCCACTCCTAACATGACCATTGCCATTCTCCCCAAAAGTAAAAACGATGAAGACCGCCTTTCCACT GCTCTCCATCGCGCCTTAGAGGAAGACCCCACACTTAGCCTTGAGAAAAACCTGGAAACCCGCCAGAACCTCCTTTCCGG CATGGGGGAACTCCATTTGGAAATTGTTCTCGAAGCAATTAAACGGAAGTATGGTGTTGAAGTGGTAACCGAAGAATTAC GGGTGCCTTACCGGGAGACTATCCGGAAAACGGTTCAGGTGGAAGGTAAATATAAAAAGCAAACCGGTGGCCGGGGTCAG TACGGCCATGTGTGGCTTAGATTAGAACCCCTGCCGGATAAAGAGTTTGAGTTTGGTGAAGAGATTTTTGGCGGTGCCGT TCCCAAACAGTATTTTCCGGCGGTAGAAAAAGGAATTCGCGAAGCGTTAAATGAAGGAGTACTGGCCGGTTATAAAGTAA TGAATGTGCGGGCGGTACTGTACGATGGTTCGTATCACCCGGTGGACTCTTCCGAACTGGCTTTTAAGATTGCGGCCAGT CAGGCTTTCAAGAAAGGGGTTAAGGAAGCAAATCCGGTACTTTTGGAACCGGTAATGCTTGTTGAAGTGACGGTGCCGGA GCAATTTATGGGGGATGTGATCAGCGACTTTAACGGTAAACGTGGCCATGTTCTTGGCATGGAAACCCAGGGACGCTGGG CCAGGGTTAAAGCTTATGTACCGTATGCCGAGATGTTAAAATATAATATTGACTTAAAAGCGATGACCCAGGCCAGGGGC TTCTACACCATGACTTTCAGCCACTACCAGGAAGTACCTCCCAAACTACAGGAAGAAATTATAAAGAAAGCAAACTTAAA TAAGAAAGAAGAAGAATAA
Upstream 100 bases:
>100_bases TTCCCGTAGAATTAAAAAAATTTCAAAAAAATAAAAGGAAAACCCGAAATTATGCTGAAATAATATATTACTAATAAAAA ATCCTTAGGAGGGCTTTTAA
Downstream 100 bases:
>100_bases ACCAGTTTAGCAAATTTTTCTTGACGATTTTTCCTGATTAATGATTTAATTTTGTATGGCAAGATTGGTGTAAAGTACAA TTAAATAACATTTTCCGAAA
Product: translation elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 672; Mature: 672
Protein sequence:
>672_residues MKSYPTEFLRNIGIFAHSGAGKTSLTEALLYNTGVLKRMGRVEDGNTVSDYHPEEIKRKVTIHASLVPCEWNNHKLNFID TPGYADFIGEVKSVLKVVEGAIFVVCAASGVEIQTEVVWNLADNAGLPRFVFINKIERENANFEKTLNQIREILSAKVVP LHLPIGEGENFKGYIDVLKNKAYFFDGTNLTEGAIPAEYEERVLEAWLQLTEAAAENDDELLMMYLDGAELTPEQVALGL KKGVRAGKLYPLFVGSATKNIGIRDLLDASCELLPPPQKNYDHPVAYVFKTLADPYVGRINFVKVLGGSLKPETTLYNFK KDKPEKIGHILFMRGKDQVQSQEVNAGDIACLIKLSETGTGDVLSLKDKPVEIEPVDYPTPNMTIAILPKSKNDEDRLST ALHRALEEDPTLSLEKNLETRQNLLSGMGELHLEIVLEAIKRKYGVEVVTEELRVPYRETIRKTVQVEGKYKKQTGGRGQ YGHVWLRLEPLPDKEFEFGEEIFGGAVPKQYFPAVEKGIREALNEGVLAGYKVMNVRAVLYDGSYHPVDSSELAFKIAAS QAFKKGVKEANPVLLEPVMLVEVTVPEQFMGDVISDFNGKRGHVLGMETQGRWARVKAYVPYAEMLKYNIDLKAMTQARG FYTMTFSHYQEVPPKLQEEIIKKANLNKKEEE
Sequences:
>Translated_672_residues MKSYPTEFLRNIGIFAHSGAGKTSLTEALLYNTGVLKRMGRVEDGNTVSDYHPEEIKRKVTIHASLVPCEWNNHKLNFID TPGYADFIGEVKSVLKVVEGAIFVVCAASGVEIQTEVVWNLADNAGLPRFVFINKIERENANFEKTLNQIREILSAKVVP LHLPIGEGENFKGYIDVLKNKAYFFDGTNLTEGAIPAEYEERVLEAWLQLTEAAAENDDELLMMYLDGAELTPEQVALGL KKGVRAGKLYPLFVGSATKNIGIRDLLDASCELLPPPQKNYDHPVAYVFKTLADPYVGRINFVKVLGGSLKPETTLYNFK KDKPEKIGHILFMRGKDQVQSQEVNAGDIACLIKLSETGTGDVLSLKDKPVEIEPVDYPTPNMTIAILPKSKNDEDRLST ALHRALEEDPTLSLEKNLETRQNLLSGMGELHLEIVLEAIKRKYGVEVVTEELRVPYRETIRKTVQVEGKYKKQTGGRGQ YGHVWLRLEPLPDKEFEFGEEIFGGAVPKQYFPAVEKGIREALNEGVLAGYKVMNVRAVLYDGSYHPVDSSELAFKIAAS QAFKKGVKEANPVLLEPVMLVEVTVPEQFMGDVISDFNGKRGHVLGMETQGRWARVKAYVPYAEMLKYNIDLKAMTQARG FYTMTFSHYQEVPPKLQEEIIKKANLNKKEEE >Mature_672_residues MKSYPTEFLRNIGIFAHSGAGKTSLTEALLYNTGVLKRMGRVEDGNTVSDYHPEEIKRKVTIHASLVPCEWNNHKLNFID TPGYADFIGEVKSVLKVVEGAIFVVCAASGVEIQTEVVWNLADNAGLPRFVFINKIERENANFEKTLNQIREILSAKVVP LHLPIGEGENFKGYIDVLKNKAYFFDGTNLTEGAIPAEYEERVLEAWLQLTEAAAENDDELLMMYLDGAELTPEQVALGL KKGVRAGKLYPLFVGSATKNIGIRDLLDASCELLPPPQKNYDHPVAYVFKTLADPYVGRINFVKVLGGSLKPETTLYNFK KDKPEKIGHILFMRGKDQVQSQEVNAGDIACLIKLSETGTGDVLSLKDKPVEIEPVDYPTPNMTIAILPKSKNDEDRLST ALHRALEEDPTLSLEKNLETRQNLLSGMGELHLEIVLEAIKRKYGVEVVTEELRVPYRETIRKTVQVEGKYKKQTGGRGQ YGHVWLRLEPLPDKEFEFGEEIFGGAVPKQYFPAVEKGIREALNEGVLAGYKVMNVRAVLYDGSYHPVDSSELAFKIAAS QAFKKGVKEANPVLLEPVMLVEVTVPEQFMGDVISDFNGKRGHVLGMETQGRWARVKAYVPYAEMLKYNIDLKAMTQARG FYTMTFSHYQEVPPKLQEEIIKKANLNKKEEE
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=695, Percent_Identity=35.8273381294964, Blast_Score=424, Evalue=1e-118, Organism=Homo sapiens, GI19923640, Length=712, Percent_Identity=32.4438202247191, Blast_Score=343, Evalue=3e-94, Organism=Homo sapiens, GI25306287, Length=705, Percent_Identity=31.2056737588652, Blast_Score=305, Evalue=9e-83, Organism=Homo sapiens, GI25306283, Length=383, Percent_Identity=36.5535248041775, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI157426893, Length=158, Percent_Identity=35.4430379746835, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI94966754, Length=137, Percent_Identity=31.3868613138686, Blast_Score=73, Evalue=8e-13, Organism=Homo sapiens, GI4503483, Length=147, Percent_Identity=31.2925170068027, Blast_Score=72, Evalue=1e-12, Organism=Escherichia coli, GI1789738, Length=698, Percent_Identity=40.6876790830946, Blast_Score=513, Evalue=1e-146, Organism=Escherichia coli, GI1790835, Length=465, Percent_Identity=24.9462365591398, Blast_Score=127, Evalue=2e-30, Organism=Escherichia coli, GI48994988, Length=162, Percent_Identity=37.6543209876543, Blast_Score=97, Evalue=4e-21, Organism=Escherichia coli, GI1788922, Length=151, Percent_Identity=34.4370860927152, Blast_Score=71, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17533571, Length=691, Percent_Identity=30.3907380607815, Blast_Score=356, Evalue=2e-98, Organism=Caenorhabditis elegans, GI17556745, Length=705, Percent_Identity=27.6595744680851, Blast_Score=234, Evalue=1e-61, Organism=Caenorhabditis elegans, GI17506493, Length=389, Percent_Identity=25.9640102827763, Blast_Score=88, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17557151, Length=154, Percent_Identity=29.2207792207792, Blast_Score=70, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6323098, Length=687, Percent_Identity=32.8966521106259, Blast_Score=375, Evalue=1e-104, Organism=Saccharomyces cerevisiae, GI6322359, Length=782, Percent_Identity=26.8542199488491, Blast_Score=240, Evalue=5e-64, Organism=Saccharomyces cerevisiae, GI6324707, Length=146, Percent_Identity=30.1369863013699, Blast_Score=73, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6320593, Length=146, Percent_Identity=30.1369863013699, Blast_Score=73, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6323320, Length=156, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI24582462, Length=692, Percent_Identity=33.9595375722543, Blast_Score=399, Evalue=1e-111, Organism=Drosophila melanogaster, GI221458488, Length=712, Percent_Identity=27.3876404494382, Blast_Score=242, Evalue=5e-64, Organism=Drosophila melanogaster, GI78706572, Length=152, Percent_Identity=33.5526315789474, Blast_Score=78, Evalue=2e-14, Organism=Drosophila melanogaster, GI24585711, Length=150, Percent_Identity=29.3333333333333, Blast_Score=74, Evalue=5e-13, Organism=Drosophila melanogaster, GI24585713, Length=150, Percent_Identity=29.3333333333333, Blast_Score=74, Evalue=5e-13, Organism=Drosophila melanogaster, GI24585709, Length=150, Percent_Identity=29.3333333333333, Blast_Score=73, Evalue=5e-13,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 75292; Mature: 75292
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSYPTEFLRNIGIFAHSGAGKTSLTEALLYNTGVLKRMGRVEDGNTVSDYHPEEIKRKV CCCCHHHHHHHCCCEEECCCCCHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHCEEE TIHASLVPCEWNNHKLNFIDTPGYADFIGEVKSVLKVVEGAIFVVCAASGVEIQTEVVWN EEEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEEEEEE LADNAGLPRFVFINKIERENANFEKTLNQIREILSAKVVPLHLPIGEGENFKGYIDVLKN ECCCCCCCEEEEEEEHHHCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHCC KAYFFDGTNLTEGAIPAEYEERVLEAWLQLTEAAAENDDELLMMYLDGAELTPEQVALGL CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHH KKGVRAGKLYPLFVGSATKNIGIRDLLDASCELLPPPQKNYDHPVAYVFKTLADPYVGRI HHCCCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCE NFVKVLGGSLKPETTLYNFKKDKPEKIGHILFMRGKDQVQSQEVNAGDIACLIKLSETGT EEEEECCCCCCCCCEEECCCCCCHHHCCEEEEECCCHHHHHCCCCCCCEEEEEEEECCCC GDVLSLKDKPVEIEPVDYPTPNMTIAILPKSKNDEDRLSTALHRALEEDPTLSLEKNLET CCEEEECCCCEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEHHHCHHH RQNLLSGMGELHLEIVLEAIKRKYGVEVVTEELRVPYRETIRKTVQVEGKYKKQTGGRGQ HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHEECCCEECCCCCCCC YGHVWLRLEPLPDKEFEFGEEIFGGAVPKQYFPAVEKGIREALNEGVLAGYKVMNVRAVL CCEEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEE YDGSYHPVDSSELAFKIAASQAFKKGVKEANPVLLEPVMLVEVTVPEQFMGDVISDFNGK ECCCCCCCCCCHHEEEHHHHHHHHHHHHHCCCEEECCEEEEEEECCHHHHHHHHHHCCCC RGHVLGMETQGRWARVKAYVPYAEMLKYNIDLKAMTQARGFYTMTFSHYQEVPPKLQEEI CCCEEEECCCCCEEEEEEECCHHHHHHCCCCCEEHHCCCCEEEEEEHHHHHCCHHHHHHH IKKANLNKKEEE HHHCCCCCCCCC >Mature Secondary Structure MKSYPTEFLRNIGIFAHSGAGKTSLTEALLYNTGVLKRMGRVEDGNTVSDYHPEEIKRKV CCCCHHHHHHHCCCEEECCCCCHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHCEEE TIHASLVPCEWNNHKLNFIDTPGYADFIGEVKSVLKVVEGAIFVVCAASGVEIQTEVVWN EEEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEEEEEE LADNAGLPRFVFINKIERENANFEKTLNQIREILSAKVVPLHLPIGEGENFKGYIDVLKN ECCCCCCCEEEEEEEHHHCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHCC KAYFFDGTNLTEGAIPAEYEERVLEAWLQLTEAAAENDDELLMMYLDGAELTPEQVALGL CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHH KKGVRAGKLYPLFVGSATKNIGIRDLLDASCELLPPPQKNYDHPVAYVFKTLADPYVGRI HHCCCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCE NFVKVLGGSLKPETTLYNFKKDKPEKIGHILFMRGKDQVQSQEVNAGDIACLIKLSETGT EEEEECCCCCCCCCEEECCCCCCHHHCCEEEEECCCHHHHHCCCCCCCEEEEEEEECCCC GDVLSLKDKPVEIEPVDYPTPNMTIAILPKSKNDEDRLSTALHRALEEDPTLSLEKNLET CCEEEECCCCEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEHHHCHHH RQNLLSGMGELHLEIVLEAIKRKYGVEVVTEELRVPYRETIRKTVQVEGKYKKQTGGRGQ HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHEECCCEECCCCCCCC YGHVWLRLEPLPDKEFEFGEEIFGGAVPKQYFPAVEKGIREALNEGVLAGYKVMNVRAVL CCEEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEE YDGSYHPVDSSELAFKIAASQAFKKGVKEANPVLLEPVMLVEVTVPEQFMGDVISDFNGK ECCCCCCCCCCHHEEEHHHHHHHHHHHHHCCCEEECCEEEEEEECCHHHHHHHHHHCCCC RGHVLGMETQGRWARVKAYVPYAEMLKYNIDLKAMTQARGFYTMTFSHYQEVPPKLQEEI CCCEEEECCCCCEEEEEEECCHHHHHHCCCCCEEHHCCCCEEEEEEHHHHHCCHHHHHHH IKKANLNKKEEE HHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA