Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
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Accession | NC_007503 |
Length | 2,401,520 |
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The map label for this gene is yeaH [C]
Identifier: 78043949
GI number: 78043949
Start: 1067567
End: 1068703
Strand: Direct
Name: yeaH [C]
Synonym: CHY_1201
Alternate gene names: 78043949
Gene position: 1067567-1068703 (Clockwise)
Preceding gene: 78042844
Following gene: 78043412
Centisome position: 44.45
GC content: 36.41
Gene sequence:
>1137_bases GTGGGCAATTGTATAATTTCCAGAGAAGATTGGAGTCTTCACCGCAAAGGAGAATTAGATAAAGAACGGCATCAGGAAAA AGTACGGGAAGCAATTAAAAGAAACCTGCCGGAAATTTTAAGTGACGAAGCCATAATCATGAGCGATGGCAAAAAAATAA TCAAGGTTCCGATTCGCAGCATTGAACATTATCACTTTCGCTACGATTTTAATAAACAAAAACATACCGGGCAGGGAAGT GGGGGTACAAAAGTTGGAGATGTTTTGGGTAAAGAAAGTGGGAGTGCCAAGGGTGATAAAGGCAAAGGAGCAGGAGGTTT ACCCGGTTATGATTACTATGAAGCGGAAGTTTCGCTTGATGAATTAACGGAAATTCTTTTGGAAGATTTAGAACTCCCCC ATTTAAAAAACAAAAGTAAAGATAAAATAACCCATGAAAATTACGACTTTCGCGATGTTAGAAAAAAAGGCTTAATGGGT AATATTGACCGGAAAAAAACAGTATATGAAGCTTTAAAAAGAAATCTTTTAAAAAATAGTGAAAATCTGTATCAAATCAC CCAAGACGATTTAAGGTTTAAGACCTGGGACGAAGTAGAAAAACCCGAGTCCAAAGCAGTGGTTATTGCCATGATGGATA GTTCCGGTTCCATGGGACCTTTTGAGAAATACATTGCCCGAACTTTTTTCTTCTGGTTGGTGAAAGTTTTAAAATTAAAA TATCAAAATGTTGAAATAATTTATTTATCCCATCATACCGAAGCCAAAGAAGTTACGGAAAAGGAGTTTTATACCAAGGG TGAAAGCGGAGGTACCAAATGCTCCTCGGTATACCAATTAGCTTTAGACATAATTAAACAGCGTTATAATCCGCAGCAAT ACAATTTGTATGCGTTTCACTTTTCGGATGGGGATAATTTATCTTCAGATAATGAGCGGTGTTTACAGCTTGTGCTTGAA CTCTTAAAGGTATGTAATTTAGTCGGTTACGGAGAAATTGAAGGCCCATATTATTATACCGCCACTTTGAAAAATGAGTT TAAAAAAATAACCAGTCCCAACTTTGTTCTGACTTCAATAAAAGATAAAGCGGGGATTTATACCGCGTTAAAAGCTTTTT TAAAAAAAGATGGTTAA
Upstream 100 bases:
>100_bases GTAGGCGAAAGGCTTATTAACCACCATGGTTATTGTCCGGTTTGTGCCAATGAACTTTTAAAATATGTGGGGAGTTTGTT AAACAGGTAGGTGGGGTAAA
Downstream 100 bases:
>100_bases TTTTGGGGGAATTGTTATGGAAGAGTTAACGTATTTGGAAGAGGCGGTGGAAAAAATTGGGGAAATAGCTGCAAATTTAG GACTTGACTTTTTTCCGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MGNCIISREDWSLHRKGELDKERHQEKVREAIKRNLPEILSDEAIIMSDGKKIIKVPIRSIEHYHFRYDFNKQKHTGQGS GGTKVGDVLGKESGSAKGDKGKGAGGLPGYDYYEAEVSLDELTEILLEDLELPHLKNKSKDKITHENYDFRDVRKKGLMG NIDRKKTVYEALKRNLLKNSENLYQITQDDLRFKTWDEVEKPESKAVVIAMMDSSGSMGPFEKYIARTFFFWLVKVLKLK YQNVEIIYLSHHTEAKEVTEKEFYTKGESGGTKCSSVYQLALDIIKQRYNPQQYNLYAFHFSDGDNLSSDNERCLQLVLE LLKVCNLVGYGEIEGPYYYTATLKNEFKKITSPNFVLTSIKDKAGIYTALKAFLKKDG
Sequences:
>Translated_378_residues MGNCIISREDWSLHRKGELDKERHQEKVREAIKRNLPEILSDEAIIMSDGKKIIKVPIRSIEHYHFRYDFNKQKHTGQGS GGTKVGDVLGKESGSAKGDKGKGAGGLPGYDYYEAEVSLDELTEILLEDLELPHLKNKSKDKITHENYDFRDVRKKGLMG NIDRKKTVYEALKRNLLKNSENLYQITQDDLRFKTWDEVEKPESKAVVIAMMDSSGSMGPFEKYIARTFFFWLVKVLKLK YQNVEIIYLSHHTEAKEVTEKEFYTKGESGGTKCSSVYQLALDIIKQRYNPQQYNLYAFHFSDGDNLSSDNERCLQLVLE LLKVCNLVGYGEIEGPYYYTATLKNEFKKITSPNFVLTSIKDKAGIYTALKAFLKKDG >Mature_377_residues GNCIISREDWSLHRKGELDKERHQEKVREAIKRNLPEILSDEAIIMSDGKKIIKVPIRSIEHYHFRYDFNKQKHTGQGSG GTKVGDVLGKESGSAKGDKGKGAGGLPGYDYYEAEVSLDELTEILLEDLELPHLKNKSKDKITHENYDFRDVRKKGLMGN IDRKKTVYEALKRNLLKNSENLYQITQDDLRFKTWDEVEKPESKAVVIAMMDSSGSMGPFEKYIARTFFFWLVKVLKLKY QNVEIIYLSHHTEAKEVTEKEFYTKGESGGTKCSSVYQLALDIIKQRYNPQQYNLYAFHFSDGDNLSSDNERCLQLVLEL LKVCNLVGYGEIEGPYYYTATLKNEFKKITSPNFVLTSIKDKAGIYTALKAFLKKDG
Specific function: Unknown
COG id: COG2718
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0229 family [H]
Homologues:
Organism=Escherichia coli, GI1788084, Length=415, Percent_Identity=27.2289156626506, Blast_Score=150, Evalue=1e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014230 - InterPro: IPR006698 [H]
Pfam domain/function: PF04285 DUF444 [H]
EC number: NA
Molecular weight: Translated: 43379; Mature: 43248
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNCIISREDWSLHRKGELDKERHQEKVREAIKRNLPEILSDEAIIMSDGKKIIKVPIRS CCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCEEEECCCCEEEEHHHHH IEHYHFRYDFNKQKHTGQGSGGTKVGDVLGKESGSAKGDKGKGAGGLPGYDYYEAEVSLD HCEEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEHCCCHH ELTEILLEDLELPHLKNKSKDKITHENYDFRDVRKKGLMGNIDRKKTVYEALKRNLLKNS HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC ENLYQITQDDLRFKTWDEVEKPESKAVVIAMMDSSGSMGPFEKYIARTFFFWLVKVLKLK CCCEEECHHHCCCCCHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH YQNVEIIYLSHHTEAKEVTEKEFYTKGESGGTKCSSVYQLALDIIKQRYNPQQYNLYAFH CCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEE FSDGDNLSSDNERCLQLVLELLKVCNLVGYGEIEGPYYYTATLKNEFKKITSPNFVLTSI ECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHCCCCEEEEEC KDKAGIYTALKAFLKKDG CHHHHHHHHHHHHHHCCC >Mature Secondary Structure GNCIISREDWSLHRKGELDKERHQEKVREAIKRNLPEILSDEAIIMSDGKKIIKVPIRS CCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCEEEECCCCEEEEHHHHH IEHYHFRYDFNKQKHTGQGSGGTKVGDVLGKESGSAKGDKGKGAGGLPGYDYYEAEVSLD HCEEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEHCCCHH ELTEILLEDLELPHLKNKSKDKITHENYDFRDVRKKGLMGNIDRKKTVYEALKRNLLKNS HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC ENLYQITQDDLRFKTWDEVEKPESKAVVIAMMDSSGSMGPFEKYIARTFFFWLVKVLKLK CCCEEECHHHCCCCCHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH YQNVEIIYLSHHTEAKEVTEKEFYTKGESGGTKCSSVYQLALDIIKQRYNPQQYNLYAFH CCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEE FSDGDNLSSDNERCLQLVLELLKVCNLVGYGEIEGPYYYTATLKNEFKKITSPNFVLTSI ECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHCCCCEEEEEC KDKAGIYTALKAFLKKDG CHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA