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The map label for this gene is ylxY [H]

Identifier: 78043651

GI number: 78043651

Start: 1020129

End: 1020818

Strand: Direct

Name: ylxY [H]

Synonym: CHY_1146

Alternate gene names: 78043651

Gene position: 1020129-1020818 (Clockwise)

Preceding gene: 78042716

Following gene: 78044170

Centisome position: 42.48

GC content: 38.26

Gene sequence:

>690_bases
ATGCGAATCTATATTTTGAAAAAAGCTTTAGCCCTGAGCTTTTTAATTTTAACCTTTATGCTTTGCTTCTATTTTGAACG
GACCGTGGTGGTTAGCGGCTACATGAATCCCCTATACCAGGGAAACCCGGAAAAAAAACAGGTAGCCTTTTTATGTAATG
TTTACTGGGGTGAGGAAATAATTCCTGAAATGCTGAAAATTTTAGAAGAAGAACAGGTAAAGTTTTCCTTTTTTCTTGGC
GGGATTTGGGCCAAAAAACATCCGGAAGTTGTAAGGCAAATAAAAAATGCCGGCCATGAAATTGGCAATCACGGCTATTT
ACACAAACATCCGGACCTACTTTCGGTTAAGGAAAATGAGGAAGAAATTCTGAAAACCGAAAGAGTTATTGAAGAAATTT
GCGGTTATAAAACCTATCTTTTTACTCCGCCTTACGGGGAGAGGGGAAAAAATGTTTTACAAGCCGCTACCAATCTCAAA
TATAGGACGGTTATGTGGAGCATTGATACCATTGATTGGCAAAAACCGGGGCCGGGTACAATTATTAACCGGGTTTTGCC
AAATTTAAATAACGGAGCAATTATTTTAATTCATCCCATGCCGCAAACCTTGGAGGTACTGCCCATTTTAATAAAAAAAA
TAAAAGCTAAAGGTTACCGGATAGTTACCGTTGGGGAAATCATAGATTAA

Upstream 100 bases:

>100_bases
AATAGATAAAGTCAAGAAAAACCCGTCCCATTAAGACGGGTTTTGTTCTTTTTACCCCTTCCCGGTCGTAAAATTATGGT
AAAAAGAGGGGAGGGTGGGC

Downstream 100 bases:

>100_bases
TATTTTACGCTTATTTGGCAACAATACAATTGGTGATAATAGATGAAGAGATATTTGATTCCATTGCTTTTATGTTTGTT
AACGTTACCGGTAAAAGTCC

Product: polysaccharide deacetylase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MRIYILKKALALSFLILTFMLCFYFERTVVVSGYMNPLYQGNPEKKQVAFLCNVYWGEEIIPEMLKILEEEQVKFSFFLG
GIWAKKHPEVVRQIKNAGHEIGNHGYLHKHPDLLSVKENEEEILKTERVIEEICGYKTYLFTPPYGERGKNVLQAATNLK
YRTVMWSIDTIDWQKPGPGTIINRVLPNLNNGAIILIHPMPQTLEVLPILIKKIKAKGYRIVTVGEIID

Sequences:

>Translated_229_residues
MRIYILKKALALSFLILTFMLCFYFERTVVVSGYMNPLYQGNPEKKQVAFLCNVYWGEEIIPEMLKILEEEQVKFSFFLG
GIWAKKHPEVVRQIKNAGHEIGNHGYLHKHPDLLSVKENEEEILKTERVIEEICGYKTYLFTPPYGERGKNVLQAATNLK
YRTVMWSIDTIDWQKPGPGTIINRVLPNLNNGAIILIHPMPQTLEVLPILIKKIKAKGYRIVTVGEIID
>Mature_229_residues
MRIYILKKALALSFLILTFMLCFYFERTVVVSGYMNPLYQGNPEKKQVAFLCNVYWGEEIIPEMLKILEEEQVKFSFFLG
GIWAKKHPEVVRQIKNAGHEIGNHGYLHKHPDLLSVKENEEEILKTERVIEEICGYKTYLFTPPYGERGKNVLQAATNLK
YRTVMWSIDTIDWQKPGPGTIINRVLPNLNNGAIILIHPMPQTLEVLPILIKKIKAKGYRIVTVGEIID

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509
- InterPro:   IPR014228
- InterPro:   IPR010916 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 26418; Mature: 26418

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIYILKKALALSFLILTFMLCFYFERTVVVSGYMNPLYQGNPEKKQVAFLCNVYWGEEI
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHEEEEEHHHCCHHH
IPEMLKILEEEQVKFSFFLGGIWAKKHPEVVRQIKNAGHEIGNHGYLHKHPDLLSVKENE
HHHHHHHHHHHHHEEEEEECCHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCH
EEILKTERVIEEICGYKTYLFTPPYGERGKNVLQAATNLKYRTVMWSIDTIDWQKPGPGT
HHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCH
IINRVLPNLNNGAIILIHPMPQTLEVLPILIKKIKAKGYRIVTVGEIID
HHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEECCCCC
>Mature Secondary Structure
MRIYILKKALALSFLILTFMLCFYFERTVVVSGYMNPLYQGNPEKKQVAFLCNVYWGEEI
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHEEEEEHHHCCHHH
IPEMLKILEEEQVKFSFFLGGIWAKKHPEVVRQIKNAGHEIGNHGYLHKHPDLLSVKENE
HHHHHHHHHHHHHEEEEEECCHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCH
EEILKTERVIEEICGYKTYLFTPPYGERGKNVLQAATNLKYRTVMWSIDTIDWQKPGPGT
HHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCH
IINRVLPNLNNGAIILIHPMPQTLEVLPILIKKIKAKGYRIVTVGEIID
HHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 8825779 [H]