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The map label for this gene is spoVS [H]

Identifier: 78042997

GI number: 78042997

Start: 1044357

End: 1044623

Strand: Direct

Name: spoVS [H]

Synonym: CHY_1171

Alternate gene names: 78042997

Gene position: 1044357-1044623 (Clockwise)

Preceding gene: 78044516

Following gene: 78043313

Centisome position: 43.49

GC content: 50.19

Gene sequence:

>267_bases
TTGCTAATGGAAGTGTTGAAAGTTTCAGCAAAGTCTAATCCAAATTCGGTAGCCGGTGCTTTAGCTGGGGTTATCCGGGA
AAGAGGCAGCGCGGAGTTACAAGCTATTGGTGCAGGGGCGATTAATCAAGCGGTGAAAGCTGTGGCGATTGCCCGTGGTT
ATGTAGCGCCCAGCGGCTTGGATCTGGTATGCATCCCTGCCTTCACCGACATCGTTATCGACGGTGAAGAACGGACTGCC
ATAAAATTAATTGTTCAGCCCCGTTAA

Upstream 100 bases:

>100_bases
TAAAAATTTAAAAAAAATTTAAAAATAAAAAAGGAAATTTCCCTAAAATAGCGAATATATTGATATACCAGATATAGTAA
AATATACAAACTAAGGAGGT

Downstream 100 bases:

>100_bases
AAAGTTTTAAGTGAAATGCCTGTTTATCTTTACGATAGACAGGCATTTATTCTTTCTAAGGAGAGTGAAATGATTGATGA
TTATCGACTGTCATCTGGAT

Product: stage V sporulation protein S

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MLMEVLKVSAKSNPNSVAGALAGVIRERGSAELQAIGAGAINQAVKAVAIARGYVAPSGLDLVCIPAFTDIVIDGEERTA
IKLIVQPR

Sequences:

>Translated_88_residues
MLMEVLKVSAKSNPNSVAGALAGVIRERGSAELQAIGAGAINQAVKAVAIARGYVAPSGLDLVCIPAFTDIVIDGEERTA
IKLIVQPR
>Mature_88_residues
MLMEVLKVSAKSNPNSVAGALAGVIRERGSAELQAIGAGAINQAVKAVAIARGYVAPSGLDLVCIPAFTDIVIDGEERTA
IKLIVQPR

Specific function: Induced early in sporulation under the control of sigma- H. Interferes with sporulation at an early stage. Seems to play a positive role in allowing cells to progress beyond stage V of sporulation [H]

COG id: COG2359

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007347
- ProDom:   PD061837 [H]

Pfam domain/function: PF04232 SpoVS [H]

EC number: NA

Molecular weight: Translated: 9056; Mature: 9056

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMEVLKVSAKSNPNSVAGALAGVIRERGSAELQAIGAGAINQAVKAVAIARGYVAPSGL
CHHHHEEHHCCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCC
DLVCIPAFTDIVIDGEERTAIKLIVQPR
CEEEECCCEEEEECCCCCEEEEEEEECC
>Mature Secondary Structure
MLMEVLKVSAKSNPNSVAGALAGVIRERGSAELQAIGAGAINQAVKAVAIARGYVAPSGL
CHHHHEEHHCCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCC
DLVCIPAFTDIVIDGEERTAIKLIVQPR
CEEEECCCEEEEECCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7559352; 9384377 [H]