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The map label for this gene is fliD [H]

Identifier: 78042782

GI number: 78042782

Start: 872953

End: 874383

Strand: Direct

Name: fliD [H]

Synonym: CHY_0985

Alternate gene names: 78042782

Gene position: 872953-874383 (Clockwise)

Preceding gene: 78045089

Following gene: 78045039

Centisome position: 36.35

GC content: 39.27

Gene sequence:

>1431_bases
ATGCCCATTCAAATTGGTGGTTTGGCTTCCGGGCTTGATACTAATAAAATTGTAGAGCAATTAATGCAGATTGAAAGAAA
ACCTCTGGAAAGATTAGAGCAGCGAAAAGCGAATTTAGAAGCAGTACGAAAAGCCTGGAGTGAAATAAAAACAAAGCTAA
GCACGTTATACTCAACTCTGCAGTCGCTGCAGTCAGCGTCTCTCTACACTTCCCTTACCGCTACTTCTTCAGATACAACT
ATCCTTACAGCATCTGCTCAATCAACTGCTGTTAAAGGAAGCTATACCATAGAAGTGCAAAGTGTAGCTACCAGCTACGT
TATTGGCTCAAACCAACAAACTTCTATTACAGCAACCTTAAACTTGAATCCAACTTCCTTTAAAATAGCAATTGGCGGGG
TAGTGCAAAAAGACAGCCAGGGTAATGATATTGTTATCTCTATTGATTCTACCGATAGCTTGGTAAGTATTCGAGATAAA
ATAAATAATGCCAAGGCCGGCGTTACTGCTTCAATTGTTGATAATAGACTTTTATTAACAGCCAATGTTACCGGGTCAGC
TAACTCGATATCTTTTACGGCAGTAAGCGGTGATGCCTTACAAGCATTGGGAATTGCTGATGCCAATGGTAATGCGGTTA
ATGTTGTTCAGTCAGGTGTCGATGCTAAATTGATTATTAACGGCTTAACGGTGATTCGCAGTTCGAATACAATTAGTGAC
GCCATATACGGCGTAACCCTTAATGTAAAAAAAATCGGGACTGTTAGTGTTACTGTTGATAACGATACTGCTTCCATCAT
TGAGAAAATAAAAACTTTTGTAAACCAGTATAATGATTTAATGAACGATTTAGCAACAAAAACTGCTTATGACCCCAATA
CCAAAACAAAAGGAGTTTTGCAGGGAGATGCTACGGCCCAGCAAATTATGTTTCAATTAAGACAAATTGTGGGAAGTGCC
GTTTCCGGTCTTACCGATACGGCAACTTACAATGGCAAGACGGTTACTTTAAATAGTTTAATGGCTATAGGCATATCTAC
TTCCGGAAAGGAAGCTACCTTATCTCTGGATGAAAATAAGCTTACGGAGCTTATCAAGCAAAATGCCCAAGCGGTAGGAA
AAATTTTCACAAATACTGCCAATAATGGAATAATCGATAATTTAAAACCATACGTTGAAAGCCTGGCGGTTTATGCTACT
GCAAATGGAGTTCATACTGATGCCATTTTGGTAACTAAAGATAAGTCACTTGCTGACCAATTGAAATATCTTCAAGAGCA
AATTGATCGCTTTAACGATTATTTAACGCGCAAAGAAGAAGAACTGTGGAATAAATTTACGCAGCTTGAAAAAGTGATGT
CCGGTTTGCAGGCCCAGAGCAATTGGTTGGCGGCCCAGGTAAGTAGCTTAACAGGAGCTAACAAGAAATAG

Upstream 100 bases:

>100_bases
AATCAGGGAAATTCCGCCCCATCAGGTTTTAGAAATAGTGGCGGAGATCAAGAAACTTTTGGGAATACTGGTCGATACTA
AAATTTAAGAGGTGAGGGCA

Downstream 100 bases:

>100_bases
CTGAGGTGAAAGAGCCATGAATAATCCCTATGCTCAATACCAAACGCAAAATATCGCTACCGCTCCACCAGAAAAATTGT
TAATCATGCTTTATGACGGT

Product: flagellar hook-associated protein 2

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 476; Mature: 475

Protein sequence:

>476_residues
MPIQIGGLASGLDTNKIVEQLMQIERKPLERLEQRKANLEAVRKAWSEIKTKLSTLYSTLQSLQSASLYTSLTATSSDTT
ILTASAQSTAVKGSYTIEVQSVATSYVIGSNQQTSITATLNLNPTSFKIAIGGVVQKDSQGNDIVISIDSTDSLVSIRDK
INNAKAGVTASIVDNRLLLTANVTGSANSISFTAVSGDALQALGIADANGNAVNVVQSGVDAKLIINGLTVIRSSNTISD
AIYGVTLNVKKIGTVSVTVDNDTASIIEKIKTFVNQYNDLMNDLATKTAYDPNTKTKGVLQGDATAQQIMFQLRQIVGSA
VSGLTDTATYNGKTVTLNSLMAIGISTSGKEATLSLDENKLTELIKQNAQAVGKIFTNTANNGIIDNLKPYVESLAVYAT
ANGVHTDAILVTKDKSLADQLKYLQEQIDRFNDYLTRKEEELWNKFTQLEKVMSGLQAQSNWLAAQVSSLTGANKK

Sequences:

>Translated_476_residues
MPIQIGGLASGLDTNKIVEQLMQIERKPLERLEQRKANLEAVRKAWSEIKTKLSTLYSTLQSLQSASLYTSLTATSSDTT
ILTASAQSTAVKGSYTIEVQSVATSYVIGSNQQTSITATLNLNPTSFKIAIGGVVQKDSQGNDIVISIDSTDSLVSIRDK
INNAKAGVTASIVDNRLLLTANVTGSANSISFTAVSGDALQALGIADANGNAVNVVQSGVDAKLIINGLTVIRSSNTISD
AIYGVTLNVKKIGTVSVTVDNDTASIIEKIKTFVNQYNDLMNDLATKTAYDPNTKTKGVLQGDATAQQIMFQLRQIVGSA
VSGLTDTATYNGKTVTLNSLMAIGISTSGKEATLSLDENKLTELIKQNAQAVGKIFTNTANNGIIDNLKPYVESLAVYAT
ANGVHTDAILVTKDKSLADQLKYLQEQIDRFNDYLTRKEEELWNKFTQLEKVMSGLQAQSNWLAAQVSSLTGANKK
>Mature_475_residues
PIQIGGLASGLDTNKIVEQLMQIERKPLERLEQRKANLEAVRKAWSEIKTKLSTLYSTLQSLQSASLYTSLTATSSDTTI
LTASAQSTAVKGSYTIEVQSVATSYVIGSNQQTSITATLNLNPTSFKIAIGGVVQKDSQGNDIVISIDSTDSLVSIRDKI
NNAKAGVTASIVDNRLLLTANVTGSANSISFTAVSGDALQALGIADANGNAVNVVQSGVDAKLIINGLTVIRSSNTISDA
IYGVTLNVKKIGTVSVTVDNDTASIIEKIKTFVNQYNDLMNDLATKTAYDPNTKTKGVLQGDATAQQIMFQLRQIVGSAV
SGLTDTATYNGKTVTLNSLMAIGISTSGKEATLSLDENKLTELIKQNAQAVGKIFTNTANNGIIDNLKPYVESLAVYATA
NGVHTDAILVTKDKSLADQLKYLQEQIDRFNDYLTRKEEELWNKFTQLEKVMSGLQAQSNWLAAQVSSLTGANKK

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=486, Percent_Identity=30.6584362139918, Blast_Score=141, Evalue=8e-35,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 50836; Mature: 50705

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIQIGGLASGLDTNKIVEQLMQIERKPLERLEQRKANLEAVRKAWSEIKTKLSTLYSTL
CCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSLQSASLYTSLTATSSDTTILTASAQSTAVKGSYTIEVQSVATSYVIGSNQQTSITATL
HHHHHHHHHEEEEECCCCCEEEEECCCCCEECCEEEEEEEEHEEEEEECCCCCEEEEEEE
NLNPTSFKIAIGGVVQKDSQGNDIVISIDSTDSLVSIRDKINNAKAGVTASIVDNRLLLT
EECCCEEEEEECCEEECCCCCCEEEEEECCCCCHHHHHHHCCCCCCCEEEEEECCEEEEE
ANVTGSANSISFTAVSGDALQALGIADANGNAVNVVQSGVDAKLIINGLTVIRSSNTISD
EECCCCCCCEEEEEECCCHHHEEEEECCCCCEEEEECCCCCCEEEEECEEEEECCCCHHH
AIYGVTLNVKKIGTVSVTVDNDTASIIEKIKTFVNQYNDLMNDLATKTAYDPNTKTKGVL
EEEEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE
QGDATAQQIMFQLRQIVGSAVSGLTDTATYNGKTVTLNSLMAIGISTSGKEATLSLDENK
ECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCEEEEEECCCCCCEEEEECHHH
LTELIKQNAQAVGKIFTNTANNGIIDNLKPYVESLAVYATANGVHTDAILVTKDKSLADQ
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEEEECCCCEEEEEEEECCHHHHHH
LKYLQEQIDRFNDYLTRKEEELWNKFTQLEKVMSGLQAQSNWLAAQVSSLTGANKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PIQIGGLASGLDTNKIVEQLMQIERKPLERLEQRKANLEAVRKAWSEIKTKLSTLYSTL
CEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSLQSASLYTSLTATSSDTTILTASAQSTAVKGSYTIEVQSVATSYVIGSNQQTSITATL
HHHHHHHHHEEEEECCCCCEEEEECCCCCEECCEEEEEEEEHEEEEEECCCCCEEEEEEE
NLNPTSFKIAIGGVVQKDSQGNDIVISIDSTDSLVSIRDKINNAKAGVTASIVDNRLLLT
EECCCEEEEEECCEEECCCCCCEEEEEECCCCCHHHHHHHCCCCCCCEEEEEECCEEEEE
ANVTGSANSISFTAVSGDALQALGIADANGNAVNVVQSGVDAKLIINGLTVIRSSNTISD
EECCCCCCCEEEEEECCCHHHEEEEECCCCCEEEEECCCCCCEEEEECEEEEECCCCHHH
AIYGVTLNVKKIGTVSVTVDNDTASIIEKIKTFVNQYNDLMNDLATKTAYDPNTKTKGVL
EEEEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE
QGDATAQQIMFQLRQIVGSAVSGLTDTATYNGKTVTLNSLMAIGISTSGKEATLSLDENK
ECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCEEEEEECCCCCCEEEEECHHH
LTELIKQNAQAVGKIFTNTANNGIIDNLKPYVESLAVYATANGVHTDAILVTKDKSLADQ
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEEEECCCCEEEEEEEECCHHHHHH
LKYLQEQIDRFNDYLTRKEEELWNKFTQLEKVMSGLQAQSNWLAAQVSSLTGANKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1527488; 9097040; 9278503; 2659972; 6305924 [H]