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The map label for this gene is hdrB2 [H]

Identifier: 78042755

GI number: 78042755

Start: 1095149

End: 1096006

Strand: Direct

Name: hdrB2 [H]

Synonym: CHY_1229

Alternate gene names: 78042755

Gene position: 1095149-1096006 (Clockwise)

Preceding gene: 78042839

Following gene: 78043298

Centisome position: 45.6

GC content: 39.63

Gene sequence:

>858_bases
ATGAAAACCGGATATTATCCCGGATGTTCACTTCATTCAACTGCTACCGAATATAACGAGTCAGTTTTGGCCGTTGTAAA
GGCAATTAACAACGAGGTAAAAGAAATCGATGATTGGAATTGTTGTGGAGCTACCGCCGGCCACAGCACTTCATCGGAAC
TGGCAATTGGACTTCCCCTTCGTAATTTAATGCTTGCGGAAAAGGAAGGATTTGACGAATTGTTGGTGCCCTGTGCGGCT
TGCTATAATCTTTTCAAAACCGCACAATTTGAAGTTGCCCATGGTCAAAAGCAAGATTTAGTTGCCGACATGGAACATCA
ATTAGGGTTAACATACCAAAATAAGATAAACGTTTTAAATTTTATTGAATATGTTTTAAAACCAGAAAATATCGAAAAAA
TAAAAAAATTAATTAAAAGGCCGTTAGGAGGAATAAAAGTTGCTGCTTACTACGGTTGCTTGCTTTTAAGACCACACAAT
GTAGTTGGATTTGATAATCCCGAAAGGCCAACAAAAATGGAAAAACTTCTGGAAGCTTTAGGAGCTTCGCCGGTTCGTTG
GAATGCAAAAAATGAATGCTGCGGTGGTAGCCAAGCTCTTTCAAAACCTGAATTGGTTGTGAAACTGGTTAATAATATTG
TTGCAAATGCCCGCGATAATGAAGCAGAACTGATAGTTACGGCTTGTCCCCTCTGCCAGGCAAATTTAGATGGACGGCAG
ATAAACTGGGATTCACCGGAACAAAACAAACAGCTTTTACCGGTTTTATACATTTCGGAGCTAATTGGTTATGCTTTGGG
TTTACCTGTAGAAAAGTGGTTTGCCAAACATCTTGTTCCCCCTTCGTTAAAAGCTTAA

Upstream 100 bases:

>100_bases
TACAGATGTTTTTAAAAGGAAAAATAAAGATTACTCCCCATAAAATCAACAAAATATGGGAAGTCAAAAATTTATTTTCC
AGTGTAAAGGGGAGTGAGTA

Downstream 100 bases:

>100_bases
GGGGAAGGTGGGGAGGTTTTTATGACAAAAAGCTATCTGGTAATCGGTGCCGGCGCAGTGGGATTACAAATAGCCCAGGA
TTTAGAAGAAAATGGGCATG

Product: putative succinate dehydrogenase subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MKTGYYPGCSLHSTATEYNESVLAVVKAINNEVKEIDDWNCCGATAGHSTSSELAIGLPLRNLMLAEKEGFDELLVPCAA
CYNLFKTAQFEVAHGQKQDLVADMEHQLGLTYQNKINVLNFIEYVLKPENIEKIKKLIKRPLGGIKVAAYYGCLLLRPHN
VVGFDNPERPTKMEKLLEALGASPVRWNAKNECCGGSQALSKPELVVKLVNNIVANARDNEAELIVTACPLCQANLDGRQ
INWDSPEQNKQLLPVLYISELIGYALGLPVEKWFAKHLVPPSLKA

Sequences:

>Translated_285_residues
MKTGYYPGCSLHSTATEYNESVLAVVKAINNEVKEIDDWNCCGATAGHSTSSELAIGLPLRNLMLAEKEGFDELLVPCAA
CYNLFKTAQFEVAHGQKQDLVADMEHQLGLTYQNKINVLNFIEYVLKPENIEKIKKLIKRPLGGIKVAAYYGCLLLRPHN
VVGFDNPERPTKMEKLLEALGASPVRWNAKNECCGGSQALSKPELVVKLVNNIVANARDNEAELIVTACPLCQANLDGRQ
INWDSPEQNKQLLPVLYISELIGYALGLPVEKWFAKHLVPPSLKA
>Mature_285_residues
MKTGYYPGCSLHSTATEYNESVLAVVKAINNEVKEIDDWNCCGATAGHSTSSELAIGLPLRNLMLAEKEGFDELLVPCAA
CYNLFKTAQFEVAHGQKQDLVADMEHQLGLTYQNKINVLNFIEYVLKPENIEKIKKLIKRPLGGIKVAAYYGCLLLRPHN
VVGFDNPERPTKMEKLLEALGASPVRWNAKNECCGGSQALSKPELVVKLVNNIVANARDNEAELIVTACPLCQANLDGRQ
INWDSPEQNKQLLPVLYISELIGYALGLPVEKWFAKHLVPPSLKA

Specific function: Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). HdrB may have a function in energy transduction [H]

COG id: COG2048

COG function: function code C; Heterodisulfide reductase, subunit B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hdrB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017678
- InterPro:   IPR004017 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: =1.8.98.1 [H]

Molecular weight: Translated: 31490; Mature: 31490

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTGYYPGCSLHSTATEYNESVLAVVKAINNEVKEIDDWNCCGATAGHSTSSELAIGLPL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCH
RNLMLAEKEGFDELLVPCAACYNLFKTAQFEVAHGQKQDLVADMEHQLGLTYQNKINVLN
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
FIEYVLKPENIEKIKKLIKRPLGGIKVAAYYGCLLLRPHNVVGFDNPERPTKMEKLLEAL
HHHHHHCCCCHHHHHHHHHCCCCCEEHHHHHCEEEECCCCCCCCCCCCCCHHHHHHHHHH
GASPVRWNAKNECCGGSQALSKPELVVKLVNNIVANARDNEAELIVTACPLCQANLDGRQ
CCCCEEECCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHCCCCCCC
INWDSPEQNKQLLPVLYISELIGYALGLPVEKWFAKHLVPPSLKA
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKTGYYPGCSLHSTATEYNESVLAVVKAINNEVKEIDDWNCCGATAGHSTSSELAIGLPL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCH
RNLMLAEKEGFDELLVPCAACYNLFKTAQFEVAHGQKQDLVADMEHQLGLTYQNKINVLN
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
FIEYVLKPENIEKIKKLIKRPLGGIKVAAYYGCLLLRPHNVVGFDNPERPTKMEKLLEAL
HHHHHHCCCCHHHHHHHHHCCCCCEEHHHHHCEEEECCCCCCCCCCCCCCHHHHHHHHHH
GASPVRWNAKNECCGGSQALSKPELVVKLVNNIVANARDNEAELIVTACPLCQANLDGRQ
CCCCEEECCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHCCCCCCC
INWDSPEQNKQLLPVLYISELIGYALGLPVEKWFAKHLVPPSLKA
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]