Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

Click here to switch to the map view.

The map label for this gene is 78042618

Identifier: 78042618

GI number: 78042618

Start: 838656

End: 839309

Strand: Direct

Name: 78042618

Synonym: CHY_0948

Alternate gene names: NA

Gene position: 838656-839309 (Clockwise)

Preceding gene: 78043945

Following gene: 78043740

Centisome position: 34.92

GC content: 43.12

Gene sequence:

>654_bases
ATGAGAGAAAAACTTTTACAGTTAGAGGAAGCGTTAAATCAATTAGAACAGTATTATCTTATTCGGAAGGGTCAAAAGGA
GCAAATAGAAAAAGAACTTTTGGAAAAAGAAGAGAAGTTAAAAGAGCTTACCGCGGAGCGGGATAAACTCGAAAAAACCC
GTTATCTCTTACTGGTGGCCGGGCAATACGCCCGGGAACAGGCGAAAAAATATCTGGAAGATATTGCTACAAGCACTCTG
CAGTACGTGTTTGGCCCGGAAATAAGCCTGGAAATAGAACTTTCCGAGCGGGCCGGAGCCAATACTGCCGAGTTTTTTGT
GGTATCCGATTACGGTAGCTTAAAAGTAAAAAACCGCCCGGAAGATGCCCGGGGCGGCGGAGTGGTGGACATCCTGTCCT
TAGCTTTAAGAATATTTTTATTAAATGCCGTTGAACCAAAAATTAAAGGTCCCCTGCTTTTAGATGAACCGGGAAAACAC
GTATCGGAAGAGTTTGTAGGTTCTCTTGCCCTGTTTTTAAAAGAAACATCCCGCCATTTTAACCGGCAGGTAATAATGGT
TACGCACAATCAAAACCTGGCGGGAATTGCCGATAAAGCGTTTTTAGTGGAGTTAAAAGAAGGGGTTTCGGAAGTAAGGG
AGTTAAACCTTTAG

Upstream 100 bases:

>100_bases
AAGAAATCAAGCGCCTGGAAGAAGAGCTGACCCGGCAAATTGCTGAAATGGAACGGGAAATTCCCTGGGACTTAATTGAA
AAGTTAGAGGCGAAGGCCAA

Downstream 100 bases:

>100_bases
GGGACAAACGGTATTTCTCCCTTTATTTTTTGCCTGGTAGAGCGCACTGTCGGCAGCTTTTAATACTTCCCGAAAAGATT
TCCCATTTTGCGGGAAGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: Chromosomal Segregation ATPase; Metallophosphoesterase

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MREKLLQLEEALNQLEQYYLIRKGQKEQIEKELLEKEEKLKELTAERDKLEKTRYLLLVAGQYAREQAKKYLEDIATSTL
QYVFGPEISLEIELSERAGANTAEFFVVSDYGSLKVKNRPEDARGGGVVDILSLALRIFLLNAVEPKIKGPLLLDEPGKH
VSEEFVGSLALFLKETSRHFNRQVIMVTHNQNLAGIADKAFLVELKEGVSEVRELNL

Sequences:

>Translated_217_residues
MREKLLQLEEALNQLEQYYLIRKGQKEQIEKELLEKEEKLKELTAERDKLEKTRYLLLVAGQYAREQAKKYLEDIATSTL
QYVFGPEISLEIELSERAGANTAEFFVVSDYGSLKVKNRPEDARGGGVVDILSLALRIFLLNAVEPKIKGPLLLDEPGKH
VSEEFVGSLALFLKETSRHFNRQVIMVTHNQNLAGIADKAFLVELKEGVSEVRELNL
>Mature_217_residues
MREKLLQLEEALNQLEQYYLIRKGQKEQIEKELLEKEEKLKELTAERDKLEKTRYLLLVAGQYAREQAKKYLEDIATSTL
QYVFGPEISLEIELSERAGANTAEFFVVSDYGSLKVKNRPEDARGGGVVDILSLALRIFLLNAVEPKIKGPLLLDEPGKH
VSEEFVGSLALFLKETSRHFNRQVIMVTHNQNLAGIADKAFLVELKEGVSEVRELNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24717; Mature: 24717

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREKLLQLEEALNQLEQYYLIRKGQKEQIEKELLEKEEKLKELTAERDKLEKTRYLLLVA
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC
GQYAREQAKKYLEDIATSTLQYVFGPEISLEIELSERAGANTAEFFVVSDYGSLKVKNRP
CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEECCCCEEECCCC
EDARGGGVVDILSLALRIFLLNAVEPKIKGPLLLDEPGKHVSEEFVGSLALFLKETSRHF
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHH
NRQVIMVTHNQNLAGIADKAFLVELKEGVSEVRELNL
CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MREKLLQLEEALNQLEQYYLIRKGQKEQIEKELLEKEEKLKELTAERDKLEKTRYLLLVA
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC
GQYAREQAKKYLEDIATSTLQYVFGPEISLEIELSERAGANTAEFFVVSDYGSLKVKNRP
CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEECCCCEEECCCC
EDARGGGVVDILSLALRIFLLNAVEPKIKGPLLLDEPGKHVSEEFVGSLALFLKETSRHF
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHH
NRQVIMVTHNQNLAGIADKAFLVELKEGVSEVRELNL
CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA