| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
Click here to switch to the map view.
The map label for this gene is 77761064
Identifier: 77761064
GI number: 77761064
Start: 87912
End: 88829
Strand: Reverse
Name: 77761064
Synonym: XC_0074
Alternate gene names: NA
Gene position: 88829-87912 (Counterclockwise)
Preceding gene: 66766426
Following gene: 66766422
Centisome position: 1.73
GC content: 72.88
Gene sequence:
>918_bases ATGCGCCCGTTGTTGCGGCGCATGTATGCCGCGGTGATGGATACCCCTTCGCTGGCCGATGCCGACACCGCCATCGACCC CGCCCAGGCCACCGTGCTGGCCAGTGCGGTCAGCGCGCTCGACCACGTGGACATGCGCCCGCAGCTGCTGCCGCGGCGCC CGCACCTGTTGCCGCAGCTGATGCGTGCGGTCAACGACCCGGATGCGTCCGGCCGCGGCATCGCCGCGATCATCGCGCAG GACCCGGCGCTGGCCGCCAACCTGCTGCGCATCGCCAACAGTGCCCTGTACCGCCCGCAAGGCGGCCCGCTGGAAAGCCT GGAGCGCGCGGTGGTGCACATCGGCACCGAAGGCGTGCGCCAGATCGTGGCCGCCGCGGTGATGCAACCAGTGCTCAGCC TTGAAGGTGGCCTGTACGCCCGCCTGCCGGCGGCGGTCTGGGACTACGCGCTGCGCACCGCCACCGCCGCGGCCGCCTAT GTGCGCGAGCGCGGTGGCGACACCTTGTCGGCGCAACTGGCCGGCCTGCTGCAAGGCCTGGGCGCGGTGGTGATCCTGCG CGTGCTGCGCGACGCCTACGCCGAGCAGCCGTCGGTGCCGTACAGCCTGGAGGTGGCCGCCCACCTGGTCGACCGCCACA CCGCCGCGGTGGCCAAGACCATCGCCACGGCCTGGGAGCTGCCCGCCCAACTCGGCACCGCGCTGGACGAACAACGCCCC GAGCACGACAGCACCTTGCTGGCCACATCGCTCGGGCGCGCATTGCGCTACGGGCGCCTGGCCGCCGCCCTGGCCATGCT CGCCCGCCACGGCGCCGAAACCGAAACCCACGCCCTGAGCGTGCTTGCCACGCTGGAACCGGACGAGGCGGCCAATGCCG CGCTGTGGCAGCGGCTGGTGGCGGCGAGCGTGGAGTGA
Upstream 100 bases:
>100_bases GCCGGTGTCCGAGTCCGCGCCAGCGGCACCCGATGGCGCTGCCACCGCCATGCCCGCAAGCACAGCCGAGCCGCGCGCGG TGATGGCCGAGCCGCCGCCG
Downstream 100 bases:
>100_bases CTGGCATCAGCAGCGCACGGTAAGCGCGCCAGATCTACGACGTACCTGTGCAGCCTGATCTTCGCCACTCCCATGACCGG CAGCGCACGCGCGCGCAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MRPLLRRMYAAVMDTPSLADADTAIDPAQATVLASAVSALDHVDMRPQLLPRRPHLLPQLMRAVNDPDASGRGIAAIIAQ DPALAANLLRIANSALYRPQGGPLESLERAVVHIGTEGVRQIVAAAVMQPVLSLEGGLYARLPAAVWDYALRTATAAAAY VRERGGDTLSAQLAGLLQGLGAVVILRVLRDAYAEQPSVPYSLEVAAHLVDRHTAAVAKTIATAWELPAQLGTALDEQRP EHDSTLLATSLGRALRYGRLAAALAMLARHGAETETHALSVLATLEPDEAANAALWQRLVAASVE
Sequences:
>Translated_305_residues MRPLLRRMYAAVMDTPSLADADTAIDPAQATVLASAVSALDHVDMRPQLLPRRPHLLPQLMRAVNDPDASGRGIAAIIAQ DPALAANLLRIANSALYRPQGGPLESLERAVVHIGTEGVRQIVAAAVMQPVLSLEGGLYARLPAAVWDYALRTATAAAAY VRERGGDTLSAQLAGLLQGLGAVVILRVLRDAYAEQPSVPYSLEVAAHLVDRHTAAVAKTIATAWELPAQLGTALDEQRP EHDSTLLATSLGRALRYGRLAAALAMLARHGAETETHALSVLATLEPDEAANAALWQRLVAASVE >Mature_305_residues MRPLLRRMYAAVMDTPSLADADTAIDPAQATVLASAVSALDHVDMRPQLLPRRPHLLPQLMRAVNDPDASGRGIAAIIAQ DPALAANLLRIANSALYRPQGGPLESLERAVVHIGTEGVRQIVAAAVMQPVLSLEGGLYARLPAAVWDYALRTATAAAAY VRERGGDTLSAQLAGLLQGLGAVVILRVLRDAYAEQPSVPYSLEVAAHLVDRHTAAVAKTIATAWELPAQLGTALDEQRP EHDSTLLATSLGRALRYGRLAAALAMLARHGAETETHALSVLATLEPDEAANAALWQRLVAASVE
Specific function: Unknown
COG id: COG1639
COG function: function code T; Predicted signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32254; Mature: 32254
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPLLRRMYAAVMDTPSLADADTAIDPAQATVLASAVSALDHVDMRPQLLPRRPHLLPQL CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHH MRAVNDPDASGRGIAAIIAQDPALAANLLRIANSALYRPQGGPLESLERAVVHIGTEGVR HHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHH QIVAAAVMQPVLSLEGGLYARLPAAVWDYALRTATAAAAYVRERGGDTLSAQLAGLLQGL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH GAVVILRVLRDAYAEQPSVPYSLEVAAHLVDRHTAAVAKTIATAWELPAQLGTALDEQRP HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EHDSTLLATSLGRALRYGRLAAALAMLARHGAETETHALSVLATLEPDEAANAALWQRLV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHH AASVE HHCCC >Mature Secondary Structure MRPLLRRMYAAVMDTPSLADADTAIDPAQATVLASAVSALDHVDMRPQLLPRRPHLLPQL CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHH MRAVNDPDASGRGIAAIIAQDPALAANLLRIANSALYRPQGGPLESLERAVVHIGTEGVR HHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHH QIVAAAVMQPVLSLEGGLYARLPAAVWDYALRTATAAAAYVRERGGDTLSAQLAGLLQGL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH GAVVILRVLRDAYAEQPSVPYSLEVAAHLVDRHTAAVAKTIATAWELPAQLGTALDEQRP HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EHDSTLLATSLGRALRYGRLAAALAMLARHGAETETHALSVLATLEPDEAANAALWQRLV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHH AASVE HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA