Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 77748775
Identifier: 77748775
GI number: 77748775
Start: 5119906
End: 5121573
Strand: Direct
Name: 77748775
Synonym: XAC4331
Alternate gene names: NA
Gene position: 5119906-5121573 (Clockwise)
Preceding gene: 21245042
Following gene: 21245044
Centisome position: 98.92
GC content: 68.65
Gene sequence:
>1668_bases GTGACGCTGCTGTATCCACGTTGGGAGGCCGCCAGCCACGGGCCCAGCCTGACGGTCACCGATCTTGCCGGCCTGGAGGT CAGTGCAGCGGGGCGCCGCCTGCCATGGCGGCGCGATGGCTATGAGCCGCATGCCTTCCATGTAGAAGTGCCGGCCGGTA CGCAGCAGATTGAGGTGCGGTTCCAGATGCTGGCCGGCGGCGAGTTGCTGACACGCGACATCGTGTCCGTGCCCTGGCAG CGGTTGCTGCTGTACCCGGCCGGTTGGTATGCCAGGAACATTCCGGTGGCCGCCATGGTGACGCTGCCGGGCGGGCTGCG GCCGTTCAGCGCCTTGGACGTGGAGCGCGCGGGCGGTACGCACTACGCCTTCAAGACGACATCGCTGGAAACGCTGCTGG ATGCGCCGGTGCTCGCCGGCCGATACGCCGCGCAGCTGCCGCTGACCGGGGCGGTGTCGCTGGATATCGTGGCGCAGCGG CCCGCCGACCTGCAGGTGCCGCCCGCACGTGTGGCCGAACTACGTTCGCTGCTTGCGCAGCTCGGCGCGGTGTTCGGTCC GCCGCCGTTTGCACGCTACGCCATCCTGGCGCGGCTGAGCGACGAGGGGTCGGCCGGCGGCGCCGAGCATCGCGCGTCCA GCGAGAACGGTTTGGCGTCGTCGCATTTCCAGGACTGGCCGGGCCAGATCCTCTCGCGCGACCTGATTGCGCACGAGATC GTGCATGCCTGGAACGGCTTTTACCGGACGCCTGCCGATTTATGGGCACCGACGCCGAACGTGCCGGTTTCCGGAAGTCT GTTGTGGATGTACGAAGGACAGACCGAGTTCTGGGGCCGCGTGCTGGCGACGCGTGCCGGCCAGTTCACGCCCGATGAGG TACGCGACCGCCTGGCGCTGGAAGCAGCGGAGATCGCAGCGCGGCCCGGGCGGGCATGGCGCTCTTTGTCCGACGACGTG CACTACCCGGCTTTCATGTTGCGCCAGCCGGTGGCGTGGCGCGACTGGCAACGCCGGCGCGATTACTACTCCGAAGGGGT GATGCTGTGGCTGGCGGTGGATGCCGAACTGCGCACGCGCAGCGGGGGCAAGCGCAGCATCGACGATTTCGCGCAGCGCT TCTTTGCCGGCGCTACGCCGGACGCGCCGACGCGTACCTATACGTTCGAGGACATCTGCGCCACGTTGCATGCGGTGGCG CCAGCCAACTGGGCAGGCTTCCTGCGCGGATGGATCGATGCCCACGACGAACTGGACACCACGCGCGGCCTGACCCAACA CGGTTGGTCGCTTGTCTACACCGACACGCCGACTGCGGCATTCGGTGCCAGCGAAGAAGAAGCTGGCGTTGCCGATCTCA CCTACTCGATCGGATTGACGGTGCGCGCCGACGGCATGGTGCGCACGGTGGCCTGGAACGGCCCCGCATTCGCGGCCGGG CTGCGGCCGGGCACGCGCGTGTCGACCGTCAATGGAGCGCCGTTCACGCAGGACGCGGTGCGCGATGCGGTGCGCGGCTC CGCACGCCGCCCCATCGTATTGGGCATCGCACAGGACGCGCAGCGTGCGGACGTGCAGATCCAGTACTCCGGACCACTGC GCTATCCACGGCTGGAGCGGCTGGCCAACCGGTCCGACACCCTGGCCAGGCTGCTTGCGCCACGCTGA
Upstream 100 bases:
>100_bases CCCATTTGCCGGGGTGATGCGCGTGGACGTGGATGCCACCGATGTCGCGCGCCGCATCTTCACTGTGCACCAGCAGATAC CGGTAGACGGCAGCGGCGCA
Downstream 100 bases:
>100_bases GGCGATGGGCGCCGGCTGCCGCCACCCGTTGCCACGTACTCCACCGCGCCAGACCCTCTGCCCTTCCATGGCGCACAAGC CTTACAGTGCGCTGGCACGC
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidase M; Glycyl Aminopeptidase; M61 Family Peptidase; Pdz/Dhr/Glgf; Glycyl Aminopeptidase Protein; PDZ Domain Family Protein; Trypsin-Like Serine Protease; M61 Glycyl Aminopeptidase; Protease With C-Terminal PDZ Domain-Containing Protein; Aminopeptidase N Family Protein; Protease With C-Terminal PDZ Domain; Aminopeptidase
Number of amino acids: Translated: 555; Mature: 554
Protein sequence:
>555_residues MTLLYPRWEAASHGPSLTVTDLAGLEVSAAGRRLPWRRDGYEPHAFHVEVPAGTQQIEVRFQMLAGGELLTRDIVSVPWQ RLLLYPAGWYARNIPVAAMVTLPGGLRPFSALDVERAGGTHYAFKTTSLETLLDAPVLAGRYAAQLPLTGAVSLDIVAQR PADLQVPPARVAELRSLLAQLGAVFGPPPFARYAILARLSDEGSAGGAEHRASSENGLASSHFQDWPGQILSRDLIAHEI VHAWNGFYRTPADLWAPTPNVPVSGSLLWMYEGQTEFWGRVLATRAGQFTPDEVRDRLALEAAEIAARPGRAWRSLSDDV HYPAFMLRQPVAWRDWQRRRDYYSEGVMLWLAVDAELRTRSGGKRSIDDFAQRFFAGATPDAPTRTYTFEDICATLHAVA PANWAGFLRGWIDAHDELDTTRGLTQHGWSLVYTDTPTAAFGASEEEAGVADLTYSIGLTVRADGMVRTVAWNGPAFAAG LRPGTRVSTVNGAPFTQDAVRDAVRGSARRPIVLGIAQDAQRADVQIQYSGPLRYPRLERLANRSDTLARLLAPR
Sequences:
>Translated_555_residues MTLLYPRWEAASHGPSLTVTDLAGLEVSAAGRRLPWRRDGYEPHAFHVEVPAGTQQIEVRFQMLAGGELLTRDIVSVPWQ RLLLYPAGWYARNIPVAAMVTLPGGLRPFSALDVERAGGTHYAFKTTSLETLLDAPVLAGRYAAQLPLTGAVSLDIVAQR PADLQVPPARVAELRSLLAQLGAVFGPPPFARYAILARLSDEGSAGGAEHRASSENGLASSHFQDWPGQILSRDLIAHEI VHAWNGFYRTPADLWAPTPNVPVSGSLLWMYEGQTEFWGRVLATRAGQFTPDEVRDRLALEAAEIAARPGRAWRSLSDDV HYPAFMLRQPVAWRDWQRRRDYYSEGVMLWLAVDAELRTRSGGKRSIDDFAQRFFAGATPDAPTRTYTFEDICATLHAVA PANWAGFLRGWIDAHDELDTTRGLTQHGWSLVYTDTPTAAFGASEEEAGVADLTYSIGLTVRADGMVRTVAWNGPAFAAG LRPGTRVSTVNGAPFTQDAVRDAVRGSARRPIVLGIAQDAQRADVQIQYSGPLRYPRLERLANRSDTLARLLAPR >Mature_554_residues TLLYPRWEAASHGPSLTVTDLAGLEVSAAGRRLPWRRDGYEPHAFHVEVPAGTQQIEVRFQMLAGGELLTRDIVSVPWQR LLLYPAGWYARNIPVAAMVTLPGGLRPFSALDVERAGGTHYAFKTTSLETLLDAPVLAGRYAAQLPLTGAVSLDIVAQRP ADLQVPPARVAELRSLLAQLGAVFGPPPFARYAILARLSDEGSAGGAEHRASSENGLASSHFQDWPGQILSRDLIAHEIV HAWNGFYRTPADLWAPTPNVPVSGSLLWMYEGQTEFWGRVLATRAGQFTPDEVRDRLALEAAEIAARPGRAWRSLSDDVH YPAFMLRQPVAWRDWQRRRDYYSEGVMLWLAVDAELRTRSGGKRSIDDFAQRFFAGATPDAPTRTYTFEDICATLHAVAP ANWAGFLRGWIDAHDELDTTRGLTQHGWSLVYTDTPTAAFGASEEEAGVADLTYSIGLTVRADGMVRTVAWNGPAFAAGL RPGTRVSTVNGAPFTQDAVRDAVRGSARRPIVLGIAQDAQRADVQIQYSGPLRYPRLERLANRSDTLARLLAPR
Specific function: Unknown
COG id: COG3975
COG function: function code R; Predicted protease with the C-terminal PDZ domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60906; Mature: 60775
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLYPRWEAASHGPSLTVTDLAGLEVSAAGRRLPWRRDGYEPHAFHVEVPAGTQQIEVR CCEECCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCCEEEEE FQMLAGGELLTRDIVSVPWQRLLLYPAGWYARNIPVAAMVTLPGGLRPFSALDVERAGGT EEEECCCHHHHHHHHHCCHHHHEEECCCCCCCCCCEEEEEECCCCCCCCHHCCHHHCCCC HYAFKTTSLETLLDAPVLAGRYAAQLPLTGAVSLDIVAQRPADLQVPPARVAELRSLLAQ EEEEECCCHHHHHCCCHHHCCHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHH LGAVFGPPPFARYAILARLSDEGSAGGAEHRASSENGLASSHFQDWPGQILSRDLIAHEI HHHHCCCCCHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH VHAWNGFYRTPADLWAPTPNVPVSGSLLWMYEGQTEFWGRVLATRAGQFTPDEVRDRLAL HHHHCCCCCCCHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHH EAAEIAARPGRAWRSLSDDVHYPAFMLRQPVAWRDWQRRRDYYSEGVMLWLAVDAELRTR HHHHHHCCCCHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCEEEEEEECCHHHCC SGGKRSIDDFAQRFFAGATPDAPTRTYTFEDICATLHAVAPANWAGFLRGWIDAHDELDT CCCCCCHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHH TRGLTQHGWSLVYTDTPTAAFGASEEEAGVADLTYSIGLTVRADGMVRTVAWNGPAFAAG HCCHHHCCCEEEEECCCCHHCCCCCCCCCCEEEEEEEEEEEEECCEEEEEEECCCEEECC LRPGTRVSTVNGAPFTQDAVRDAVRGSARRPIVLGIAQDAQRADVQIQYSGPLRYPRLER CCCCCEEEECCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEECCCCCCHHHHH LANRSDTLARLLAPR HHCCHHHHHHHHCCC >Mature Secondary Structure TLLYPRWEAASHGPSLTVTDLAGLEVSAAGRRLPWRRDGYEPHAFHVEVPAGTQQIEVR CEECCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCCEEEEE FQMLAGGELLTRDIVSVPWQRLLLYPAGWYARNIPVAAMVTLPGGLRPFSALDVERAGGT EEEECCCHHHHHHHHHCCHHHHEEECCCCCCCCCCEEEEEECCCCCCCCHHCCHHHCCCC HYAFKTTSLETLLDAPVLAGRYAAQLPLTGAVSLDIVAQRPADLQVPPARVAELRSLLAQ EEEEECCCHHHHHCCCHHHCCHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHH LGAVFGPPPFARYAILARLSDEGSAGGAEHRASSENGLASSHFQDWPGQILSRDLIAHEI HHHHCCCCCHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH VHAWNGFYRTPADLWAPTPNVPVSGSLLWMYEGQTEFWGRVLATRAGQFTPDEVRDRLAL HHHHCCCCCCCHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHH EAAEIAARPGRAWRSLSDDVHYPAFMLRQPVAWRDWQRRRDYYSEGVMLWLAVDAELRTR HHHHHHCCCCHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCEEEEEEECCHHHCC SGGKRSIDDFAQRFFAGATPDAPTRTYTFEDICATLHAVAPANWAGFLRGWIDAHDELDT CCCCCCHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHH TRGLTQHGWSLVYTDTPTAAFGASEEEAGVADLTYSIGLTVRADGMVRTVAWNGPAFAAG HCCHHHCCCEEEEECCCCHHCCCCCCCCCCEEEEEEEEEEEEECCEEEEEEECCCEEECC LRPGTRVSTVNGAPFTQDAVRDAVRGSARRPIVLGIAQDAQRADVQIQYSGPLRYPRLER CCCCCEEEECCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEECCCCCCHHHHH LANRSDTLARLLAPR HHCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA