Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 77748726
Identifier: 77748726
GI number: 77748726
Start: 4198940
End: 4200811
Strand: Reverse
Name: 77748726
Synonym: XAC3547
Alternate gene names: NA
Gene position: 4200811-4198940 (Counterclockwise)
Preceding gene: 77748727
Following gene: 21244271
Centisome position: 81.17
GC content: 66.56
Gene sequence:
>1872_bases GTGATCCAGAGCTCTTCTACGCAGGTCCTTGTGCTTGCCTGCTGTGTCCTGGCTGCGTCGTGCAGTACAGCGTTGGCCGC CAACGCCGATGCGGCAGCGGCCAGTGCCCAACGCCAACAGGCCATGGCCAATGCGCCGGTCGACAGAATCATCGTCCGCT ACCGCAGCGGGCAGGTCGGCACCGCGCGCGATATCGGCCGCACTGCCTCGGCGACAGTCGGTGCGGCCGCTTCGCGCGCA TCCGTCCGTCTTGCGCCTGCCGCACGCACCGGTGCCACCGCAGCGCCAACCTATCTGCGCACGCTTGCCGCGGGCGGCGA ATTGATCAAATTGCCGGCCCAGCTCAGTCGCGCCGATGCCGACCGTCTTGTGCAGGAATTGAGCGCAGACCCAGACGTCG AATCGGCGCAGGTGGATCTGCGCATGTATCCGCTGCAAACCAGCGGCGCATTGCCGAACGATCCGCTGCTGCAAACCAAT CAATGGCATCTCATCGACCCGGTGGGTGGCATCGACGTCGCGCAAGCCTGGAAAACAACGCAGGGCGAAGGCGTCGTAGT GGCGGTACTGGATACCGGCATCCTGCCCGATCACCCGGATCTGGCCGGCAATCTGCTCACCGGCTACGACTTCATCACCG ATCCGTTCTTCTCGCGTCGCGCCACGGCCGAGCGTGTGCCCGGCGCACTGGACCTCGGCGATTGGATTGCCGAAGACGGC GACTGCGGGCTGTTCTCGGTGGCCAGCGACAGCAGCTGGCACGGCACGCACGTGGCCGGCACGGTTGCCGAAGCCACCAA CAACGGCATTGGCGGGGCAGGCGTCGCCTACAGGGCGAAAGTGCTGCCGGTGCGCGTGCTCGGGCACTGCGGCGGGCAAT TCTCCGACATCTCCGATGCCATCGTCTGGGCGTCCGGCGGTCACGTCGATGGCGTACCGGACAACCGCGATCCGGCCGAA GTGATCAACCTGAGCCTGGGCGGTGGCGGCGCATGCGGTTCGGCGATGCAGGCCGCGATCAATGGTGCAGTGGCGCGCGG CACCACCGTGGTGGTGGCGGCGGGTAATTCAACTGCCGATGTATCGACGACTGCTCCCGCCAACTGCGCCAATGTGATTG CCGTTGCCGCCACGCGCGCCACCGGTGCGCTCGCCGATTACAGCAATTTCGGCCGTCAGATCGATCTGGCCGGCCCGGGT GGCAGTTCGATGTTCTTCGCCACCAACGACGGCCCGATTCGCAGCTTCGTTTGGCAAACCCTCTACACCGGCAAAACCAC GCCGACCTCCGGGCAGTTCACCTATGGCGGCAGCGACTTCGCAGGCACCTCGATGGCATCGCCGCATGTGGCCGGCACCG CCGCATTGGTGCAGAGCGCATTGATCGCCGACGGCAAACCGCCGTTGTCGCCGGCCGCGATGGAAAATTTGCTCAAGCGC ACTGCGCGCGCATTCCCGGTGTCGATTCCGGTGGCAACGCCGGCCGGCTCCGGCATCGTGGATGCCGGAGCCGCGGTTGC CCGCGCGTTACGTCGCTGCGATCGGGGCGATGTGGGGTGCCAGGTGGATGCGCAGCCACTGCGTAATGGCGTGGTCCAGA GCGGCATCTCCAATCTGTCGGGCGATGCGGGCGTGTTCACGTTCCAAGCGCAGGCGGGTGCGGTGCTGAGTTTCATCAGC TTCGGCGGCAGCGGCCAGGCGGAGTTGTACGTGGCATTCGGACGCGAGCCCACTGCCACCGACAACGACGGCGCGTCCAC GCGTCGCGGCACCAGCCAGACGGTGCGCTTCACCGCGCCGCGTGCCGGCACCTACATCCTCAAGCTGGAAGGCAGCGGTT TCGACGCGGTGAACCTGCTGGCGCGCCAATGA
Upstream 100 bases:
>100_bases GCAGCACGACCACGCGGTTGCATGCATTCCCGCCGCCCATTGCCGGGCGGCGCGCTTTCTTCGTCATGCCCTTTCGCACT CACCTCGAAGGAATCCCATC
Downstream 100 bases:
>100_bases TCCGACACGCAGTCGTCGGTTCGGCAGGATCGTCATTTCCTTGGCGGTGAACGCCTGAAACACGGCTGCTCCGCGCGCCG ATGGACGGCGCATGCGGGCT
Product: serine protease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 623; Mature: 623
Protein sequence:
>623_residues MIQSSSTQVLVLACCVLAASCSTALAANADAAAASAQRQQAMANAPVDRIIVRYRSGQVGTARDIGRTASATVGAAASRA SVRLAPAARTGATAAPTYLRTLAAGGELIKLPAQLSRADADRLVQELSADPDVESAQVDLRMYPLQTSGALPNDPLLQTN QWHLIDPVGGIDVAQAWKTTQGEGVVVAVLDTGILPDHPDLAGNLLTGYDFITDPFFSRRATAERVPGALDLGDWIAEDG DCGLFSVASDSSWHGTHVAGTVAEATNNGIGGAGVAYRAKVLPVRVLGHCGGQFSDISDAIVWASGGHVDGVPDNRDPAE VINLSLGGGGACGSAMQAAINGAVARGTTVVVAAGNSTADVSTTAPANCANVIAVAATRATGALADYSNFGRQIDLAGPG GSSMFFATNDGPIRSFVWQTLYTGKTTPTSGQFTYGGSDFAGTSMASPHVAGTAALVQSALIADGKPPLSPAAMENLLKR TARAFPVSIPVATPAGSGIVDAGAAVARALRRCDRGDVGCQVDAQPLRNGVVQSGISNLSGDAGVFTFQAQAGAVLSFIS FGGSGQAELYVAFGREPTATDNDGASTRRGTSQTVRFTAPRAGTYILKLEGSGFDAVNLLARQ
Sequences:
>Translated_623_residues MIQSSSTQVLVLACCVLAASCSTALAANADAAAASAQRQQAMANAPVDRIIVRYRSGQVGTARDIGRTASATVGAAASRA SVRLAPAARTGATAAPTYLRTLAAGGELIKLPAQLSRADADRLVQELSADPDVESAQVDLRMYPLQTSGALPNDPLLQTN QWHLIDPVGGIDVAQAWKTTQGEGVVVAVLDTGILPDHPDLAGNLLTGYDFITDPFFSRRATAERVPGALDLGDWIAEDG DCGLFSVASDSSWHGTHVAGTVAEATNNGIGGAGVAYRAKVLPVRVLGHCGGQFSDISDAIVWASGGHVDGVPDNRDPAE VINLSLGGGGACGSAMQAAINGAVARGTTVVVAAGNSTADVSTTAPANCANVIAVAATRATGALADYSNFGRQIDLAGPG GSSMFFATNDGPIRSFVWQTLYTGKTTPTSGQFTYGGSDFAGTSMASPHVAGTAALVQSALIADGKPPLSPAAMENLLKR TARAFPVSIPVATPAGSGIVDAGAAVARALRRCDRGDVGCQVDAQPLRNGVVQSGISNLSGDAGVFTFQAQAGAVLSFIS FGGSGQAELYVAFGREPTATDNDGASTRRGTSQTVRFTAPRAGTYILKLEGSGFDAVNLLARQ >Mature_623_residues MIQSSSTQVLVLACCVLAASCSTALAANADAAAASAQRQQAMANAPVDRIIVRYRSGQVGTARDIGRTASATVGAAASRA SVRLAPAARTGATAAPTYLRTLAAGGELIKLPAQLSRADADRLVQELSADPDVESAQVDLRMYPLQTSGALPNDPLLQTN QWHLIDPVGGIDVAQAWKTTQGEGVVVAVLDTGILPDHPDLAGNLLTGYDFITDPFFSRRATAERVPGALDLGDWIAEDG DCGLFSVASDSSWHGTHVAGTVAEATNNGIGGAGVAYRAKVLPVRVLGHCGGQFSDISDAIVWASGGHVDGVPDNRDPAE VINLSLGGGGACGSAMQAAINGAVARGTTVVVAAGNSTADVSTTAPANCANVIAVAATRATGALADYSNFGRQIDLAGPG GSSMFFATNDGPIRSFVWQTLYTGKTTPTSGQFTYGGSDFAGTSMASPHVAGTAALVQSALIADGKPPLSPAAMENLLKR TARAFPVSIPVATPAGSGIVDAGAAVARALRRCDRGDVGCQVDAQPLRNGVVQSGISNLSGDAGVFTFQAQAGAVLSFIS FGGSGQAELYVAFGREPTATDNDGASTRRGTSQTVRFTAPRAGTYILKLEGSGFDAVNLLARQ
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Homo sapiens, GI76443679, Length=177, Percent_Identity=32.2033898305085, Blast_Score=72, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6324576, Length=374, Percent_Identity=27.2727272727273, Blast_Score=95, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6320775, Length=330, Percent_Identity=28.4848484848485, Blast_Score=92, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6319893, Length=346, Percent_Identity=26.5895953757225, Blast_Score=80, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007280 - InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 [H]
Pfam domain/function: PF00082 Peptidase_S8; PF04151 PPC [H]
EC number: NA
Molecular weight: Translated: 63273; Mature: 63273
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS00136 SUBTILASE_ASP ; PS00138 SUBTILASE_SER ; PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQSSSTQVLVLACCVLAASCSTALAANADAAAASAQRQQAMANAPVDRIIVRYRSGQVG CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHEEEEECCCCCC TARDIGRTASATVGAAASRASVRLAPAARTGATAAPTYLRTLAAGGELIKLPAQLSRADA CHHHCCCCCCHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCEEECCHHHHHCHH DRLVQELSADPDVESAQVDLRMYPLQTSGALPNDPLLQTNQWHLIDPVGGIDVAQAWKTT HHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCHHHHHHCCC QGEGVVVAVLDTGILPDHPDLAGNLLTGYDFITDPFFSRRATAERVPGALDLGDWIAEDG CCCCEEEEEEECCCCCCCCCCCCCHHCCCHHHCCCHHHHCCHHHHCCCCCCCHHHHCCCC DCGLFSVASDSSWHGTHVAGTVAEATNNGIGGAGVAYRAKVLPVRVLGHCGGQFSDISDA CCCEEEECCCCCCCCCEEEEEHHHHCCCCCCCCCCEEEEEEEEEEEEHHCCCCCCCCCCE IVWASGGHVDGVPDNRDPAEVINLSLGGGGACGSAMQAAINGAVARGTTVVVAAGNSTAD EEEECCCCCCCCCCCCCHHHEEEEECCCCCCHHHHHHHHHCCCEECCCEEEEECCCCCCC VSTTAPANCANVIAVAATRATGALADYSNFGRQIDLAGPGGSSMFFATNDGPIRSFVWQT CCCCCCCCHHHEEEEEEHHCCCCHHHHHHCCCEEEECCCCCCEEEEEECCCHHHHHHHHH LYTGKTTPTSGQFTYGGSDFAGTSMASPHVAGTAALVQSALIADGKPPLSPAAMENLLKR HHCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH TARAFPVSIPVATPAGSGIVDAGAAVARALRRCDRGDVGCQVDAQPLRNGVVQSGISNLS HHHHCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHCC GDAGVFTFQAQAGAVLSFISFGGSGQAELYVAFGREPTATDNDGASTRRGTSQTVRFTAP CCCCEEEEECCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECC RAGTYILKLEGSGFDAVNLLARQ CCCEEEEEECCCCCCHHHHHHCC >Mature Secondary Structure MIQSSSTQVLVLACCVLAASCSTALAANADAAAASAQRQQAMANAPVDRIIVRYRSGQVG CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHEEEEECCCCCC TARDIGRTASATVGAAASRASVRLAPAARTGATAAPTYLRTLAAGGELIKLPAQLSRADA CHHHCCCCCCHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCEEECCHHHHHCHH DRLVQELSADPDVESAQVDLRMYPLQTSGALPNDPLLQTNQWHLIDPVGGIDVAQAWKTT HHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCHHHHHHCCC QGEGVVVAVLDTGILPDHPDLAGNLLTGYDFITDPFFSRRATAERVPGALDLGDWIAEDG CCCCEEEEEEECCCCCCCCCCCCCHHCCCHHHCCCHHHHCCHHHHCCCCCCCHHHHCCCC DCGLFSVASDSSWHGTHVAGTVAEATNNGIGGAGVAYRAKVLPVRVLGHCGGQFSDISDA CCCEEEECCCCCCCCCEEEEEHHHHCCCCCCCCCCEEEEEEEEEEEEHHCCCCCCCCCCE IVWASGGHVDGVPDNRDPAEVINLSLGGGGACGSAMQAAINGAVARGTTVVVAAGNSTAD EEEECCCCCCCCCCCCCHHHEEEEECCCCCCHHHHHHHHHCCCEECCCEEEEECCCCCCC VSTTAPANCANVIAVAATRATGALADYSNFGRQIDLAGPGGSSMFFATNDGPIRSFVWQT CCCCCCCCHHHEEEEEEHHCCCCHHHHHHCCCEEEECCCCCCEEEEEECCCHHHHHHHHH LYTGKTTPTSGQFTYGGSDFAGTSMASPHVAGTAALVQSALIADGKPPLSPAAMENLLKR HHCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH TARAFPVSIPVATPAGSGIVDAGAAVARALRRCDRGDVGCQVDAQPLRNGVVQSGISNLS HHHHCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHCC GDAGVFTFQAQAGAVLSFISFGGSGQAELYVAFGREPTATDNDGASTRRGTSQTVRFTAP CCCCEEEEECCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECC RAGTYILKLEGSGFDAVNLLARQ CCCEEEEEECCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2187155; 12024217 [H]