Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 77748590
Identifier: 77748590
GI number: 77748590
Start: 1742105
End: 1744015
Strand: Reverse
Name: 77748590
Synonym: XAC1509
Alternate gene names: NA
Gene position: 1744015-1742105 (Counterclockwise)
Preceding gene: 21242262
Following gene: 21242260
Centisome position: 33.7
GC content: 49.61
Gene sequence:
>1911_bases ATGGAAGATCGAGATCAGGTGGAAAAGGAGCAAACTGCAATCGCTCCCCCAATTCCATCCATCATCAACAAACCTGTTCC GCTTGAAATCTTGGAGATTATGGATTGGCAGTCTCATCTTACTGATTATGACTGGACCGACCATCGTTGGAATGCTACTC AGCTAACGAATCAAAGATCCGAAGAATTGGCTAAGGAAGGTCACCAACAGGAGGCCTTGGTCTTGAAGTTACTCAGCTCA GTCATTTCGATGCACTTCGTTGGCAACGTGACTGAGCCATTTAAACCTATGTGGCAGCGCGATAATCGCTGCTCGCCGGC ACCACAGCACCTTAGCCAACTGGATGTGCAGTTTCTTCAAGCTATGGCAAGGTCAGCAAAAAATCCTTGGCTTAAAGCGC GGTTGGCTGATGTGGCCTGCGTTGCAGGGCCGCTGGTTGGCTTAAAAGGCCGGGAAATGGGAGAAATGGGAGCAATCGCT GCCCGTGCCTACTTAGATCACGCAACGAAATTTCTCACCGGAGAGGAGCCCCTCAGGGCGATGGACTCTGTGGAGTGCTT GCAGCGGGCCATGCATTTGGGCTGGAAATTTCGCAGAAAAGAAGATGCGTTCCGAGAGGAAGTTTGGGGAACGACCATTG ATGCAATCGATGATGCGATCAAAAGACAACATCTTGGAATCATTTCAGCACTCAAAGAAGAAATCCTTGGAAGACAACAT GCCTACGCAGAAGGCACCGCTGAAAAGCTAGAAAAGGCCGTTGATACTTGGTTTAGCAAGGATCACGAAGCAGTCGTTGA TAACATCCCAAGCTTCTACAAAAAAGCGGCCAGGCTTTGGCATGCCGCTAAGAACAGTGCTCGATCTGAGGCGTGTTATC ACAAGGCTGCCGATGCATTGATTCTCAAAGCTCGTGGTGATCGTCAGGCCATGGTGCGAGCCGATTGGATGGCAGAAGGC ATCGCTTTGCTTCGAAGGCACCGAGGTGACAGAACTAAAATTAAAGAACTGCAATCAGAGCTAGCTGAGATCCGAAGGAC CATCTCGGATGAGATGCACTCCGTCAGTCACGCCATCGATACCAAAGACCTCATTGCTTTCATCGAGCAGCAAGTCACAA GCCCCGATCTCCCTACGGCACTCTTCCAAATAGCGTTTGCGTTCTCGGATTTCACTTCGGTCGAGCAAATAAAAGCAGAA GTCATCGAGACTTCTAAGAAATATGTTTTCCAACATCTCTTTGCGAGAGTCGTCTATAACGATGAAGGCGTTCCAGTGGA ACGAGGAGATGCGTTCGATGCCAACGATCCAACCAATTTAGAACAGCACATGATCGAAAACATCTGTCGTTTTCATCATC CGCTGCTTGCCAATGTTGCGGTCATGCACGCCACCAGCCTGGTTCGTAATCGATGCGAGCCAACGCTCAATGACCTGTTG GCACTTACTCATGCATCCCCAATGGTTCCCGAGGGACACGAGTGGTCCTTGGCGAGAGGCTTCCTCGCGGGTTTGGAACA CGATTGGGAAGAGGCTGCCATCTTTCTAATTCCACAAGCTGAGCCATTTGTGCGTGCTGCGTTTAAGCGGCACAACATCA ATACGCTCGCCATCAAAGATGGAGTAGAGCAAGAGAAATCTTTAAGTGAGTTATTGATCCACGAAGACATCGCTCAGGTT TTCCACGAAGACATCGTGATAGAGCTGAAAGCCATTCTTACGCACCGATCGGGTCACAACCTGAGAAATCTCTATGGTCA CGGCCTGATTAAAGATGAGCAGCTTGCTTCGACGGCAACCATCGTGCTCTGGTGGACATTGTTGCGGTTAATCATGTGGC CCTATCGCCATCGGTTGATTCCATCCTCAGAGACATTAGCAACGCGCACTCAAAAGCAACCTAGCGAATAA
Upstream 100 bases:
>100_bases AAGTTCGTCACATGGAACGGCGACGACAGACTGCAAAGCAAGAAGTAGTTGCGGTAAAAAATAAAACTGGCTGGAAAAAT TAGACACGAGGCTTTTGCGC
Downstream 100 bases:
>100_bases GACCCACTCAAATGATGAGAGGAATCAATGGCACGTTTAGCTGAAAGCTCAGTTGTTATAGCATTTCGGGACTGGCAGTG GATAAATCGACGCGCAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 636; Mature: 636
Protein sequence:
>636_residues MEDRDQVEKEQTAIAPPIPSIINKPVPLEILEIMDWQSHLTDYDWTDHRWNATQLTNQRSEELAKEGHQQEALVLKLLSS VISMHFVGNVTEPFKPMWQRDNRCSPAPQHLSQLDVQFLQAMARSAKNPWLKARLADVACVAGPLVGLKGREMGEMGAIA ARAYLDHATKFLTGEEPLRAMDSVECLQRAMHLGWKFRRKEDAFREEVWGTTIDAIDDAIKRQHLGIISALKEEILGRQH AYAEGTAEKLEKAVDTWFSKDHEAVVDNIPSFYKKAARLWHAAKNSARSEACYHKAADALILKARGDRQAMVRADWMAEG IALLRRHRGDRTKIKELQSELAEIRRTISDEMHSVSHAIDTKDLIAFIEQQVTSPDLPTALFQIAFAFSDFTSVEQIKAE VIETSKKYVFQHLFARVVYNDEGVPVERGDAFDANDPTNLEQHMIENICRFHHPLLANVAVMHATSLVRNRCEPTLNDLL ALTHASPMVPEGHEWSLARGFLAGLEHDWEEAAIFLIPQAEPFVRAAFKRHNINTLAIKDGVEQEKSLSELLIHEDIAQV FHEDIVIELKAILTHRSGHNLRNLYGHGLIKDEQLASTATIVLWWTLLRLIMWPYRHRLIPSSETLATRTQKQPSE
Sequences:
>Translated_636_residues MEDRDQVEKEQTAIAPPIPSIINKPVPLEILEIMDWQSHLTDYDWTDHRWNATQLTNQRSEELAKEGHQQEALVLKLLSS VISMHFVGNVTEPFKPMWQRDNRCSPAPQHLSQLDVQFLQAMARSAKNPWLKARLADVACVAGPLVGLKGREMGEMGAIA ARAYLDHATKFLTGEEPLRAMDSVECLQRAMHLGWKFRRKEDAFREEVWGTTIDAIDDAIKRQHLGIISALKEEILGRQH AYAEGTAEKLEKAVDTWFSKDHEAVVDNIPSFYKKAARLWHAAKNSARSEACYHKAADALILKARGDRQAMVRADWMAEG IALLRRHRGDRTKIKELQSELAEIRRTISDEMHSVSHAIDTKDLIAFIEQQVTSPDLPTALFQIAFAFSDFTSVEQIKAE VIETSKKYVFQHLFARVVYNDEGVPVERGDAFDANDPTNLEQHMIENICRFHHPLLANVAVMHATSLVRNRCEPTLNDLL ALTHASPMVPEGHEWSLARGFLAGLEHDWEEAAIFLIPQAEPFVRAAFKRHNINTLAIKDGVEQEKSLSELLIHEDIAQV FHEDIVIELKAILTHRSGHNLRNLYGHGLIKDEQLASTATIVLWWTLLRLIMWPYRHRLIPSSETLATRTQKQPSE >Mature_636_residues MEDRDQVEKEQTAIAPPIPSIINKPVPLEILEIMDWQSHLTDYDWTDHRWNATQLTNQRSEELAKEGHQQEALVLKLLSS VISMHFVGNVTEPFKPMWQRDNRCSPAPQHLSQLDVQFLQAMARSAKNPWLKARLADVACVAGPLVGLKGREMGEMGAIA ARAYLDHATKFLTGEEPLRAMDSVECLQRAMHLGWKFRRKEDAFREEVWGTTIDAIDDAIKRQHLGIISALKEEILGRQH AYAEGTAEKLEKAVDTWFSKDHEAVVDNIPSFYKKAARLWHAAKNSARSEACYHKAADALILKARGDRQAMVRADWMAEG IALLRRHRGDRTKIKELQSELAEIRRTISDEMHSVSHAIDTKDLIAFIEQQVTSPDLPTALFQIAFAFSDFTSVEQIKAE VIETSKKYVFQHLFARVVYNDEGVPVERGDAFDANDPTNLEQHMIENICRFHHPLLANVAVMHATSLVRNRCEPTLNDLL ALTHASPMVPEGHEWSLARGFLAGLEHDWEEAAIFLIPQAEPFVRAAFKRHNINTLAIKDGVEQEKSLSELLIHEDIAQV FHEDIVIELKAILTHRSGHNLRNLYGHGLIKDEQLASTATIVLWWTLLRLIMWPYRHRLIPSSETLATRTQKQPSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72356; Mature: 72356
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDRDQVEKEQTAIAPPIPSIINKPVPLEILEIMDWQSHLTDYDWTDHRWNATQLTNQRS CCCHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH EELAKEGHQQEALVLKLLSSVISMHFVGNVTEPFKPMWQRDNRCSPAPQHLSQLDVQFLQ HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHH AMARSAKNPWLKARLADVACVAGPLVGLKGREMGEMGAIAARAYLDHATKFLTGEEPLRA HHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH MDSVECLQRAMHLGWKFRRKEDAFREEVWGTTIDAIDDAIKRQHLGIISALKEEILGRQH HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHH AYAEGTAEKLEKAVDTWFSKDHEAVVDNIPSFYKKAARLWHAAKNSARSEACYHKAADAL HHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE ILKARGDRQAMVRADWMAEGIALLRRHRGDRTKIKELQSELAEIRRTISDEMHSVSHAID EEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TKDLIAFIEQQVTSPDLPTALFQIAFAFSDFTSVEQIKAEVIETSKKYVFQHLFARVVYN HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DEGVPVERGDAFDANDPTNLEQHMIENICRFHHPLLANVAVMHATSLVRNRCEPTLNDLL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH ALTHASPMVPEGHEWSLARGFLAGLEHDWEEAAIFLIPQAEPFVRAAFKRHNINTLAIKD HHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECC GVEQEKSLSELLIHEDIAQVFHEDIVIELKAILTHRSGHNLRNLYGHGLIKDEQLASTAT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHH IVLWWTLLRLIMWPYRHRLIPSSETLATRTQKQPSE HHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCC >Mature Secondary Structure MEDRDQVEKEQTAIAPPIPSIINKPVPLEILEIMDWQSHLTDYDWTDHRWNATQLTNQRS CCCHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH EELAKEGHQQEALVLKLLSSVISMHFVGNVTEPFKPMWQRDNRCSPAPQHLSQLDVQFLQ HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHH AMARSAKNPWLKARLADVACVAGPLVGLKGREMGEMGAIAARAYLDHATKFLTGEEPLRA HHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH MDSVECLQRAMHLGWKFRRKEDAFREEVWGTTIDAIDDAIKRQHLGIISALKEEILGRQH HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHH AYAEGTAEKLEKAVDTWFSKDHEAVVDNIPSFYKKAARLWHAAKNSARSEACYHKAADAL HHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE ILKARGDRQAMVRADWMAEGIALLRRHRGDRTKIKELQSELAEIRRTISDEMHSVSHAID EEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TKDLIAFIEQQVTSPDLPTALFQIAFAFSDFTSVEQIKAEVIETSKKYVFQHLFARVVYN HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DEGVPVERGDAFDANDPTNLEQHMIENICRFHHPLLANVAVMHATSLVRNRCEPTLNDLL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH ALTHASPMVPEGHEWSLARGFLAGLEHDWEEAAIFLIPQAEPFVRAAFKRHNINTLAIKD HHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECC GVEQEKSLSELLIHEDIAQVFHEDIVIELKAILTHRSGHNLRNLYGHGLIKDEQLASTAT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHH IVLWWTLLRLIMWPYRHRLIPSSETLATRTQKQPSE HHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA