| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is 77747708
Identifier: 77747708
GI number: 77747708
Start: 1937277
End: 1938011
Strand: Reverse
Name: 77747708
Synonym: PD1669
Alternate gene names: NA
Gene position: 1938011-1937277 (Counterclockwise)
Preceding gene: 28199547
Following gene: 28199545
Centisome position: 76.91
GC content: 48.71
Gene sequence:
>735_bases ATGCAGCGACCAATCTTTCATCGTACTTTATCTATCGTTTCGTCTCAGCGCAGCAACATGTCTTTGCGTTGGATCCTGTT GGTGGTGTTTTGGTTGGTTTCATTAGCTTTGACATGGGGGGTGGCCAGCCATTCAGTCGTACCACATTTGGCTGAGACCG AGGCACAACTGCGACAGTCACGCCAGATCCAAGCTTCTCAGACGCATCAGATCCAAAAATTGCAGCAACGCCAGATCAAT CTTGAGATATCCGATCAAATCAGCCGCGCAGCTAATGTCGATATCCAATCATTGCTTGCAGAACGTGACGAACAGATTGC TGCGTTACGTGCTGACGTAGCGTTTTACGAGCGGCTAGTTGGCGCGACTGCGCAGCGCAAAGGGTTGAATACACATTCGA TTGAGTTTGTGCGAAAGCCCAGCGGGGTTTGGGATTACAATGTAGTACTGACACAGAATCTCAATCGTGGTGCAATAAGC CAGGGCCAGTTACGTTTCTCTGTAGATGGTGTCCGTGTAGGCAAGCTGACCACGATAAGCTGGAACGATTTGCACCAGAA AACCGATGTCCCGGGACAGCCTTATTCATTCCGTTATTTCCAGCAGTTGCAAGGCAGTGTGATGTTGCCGCTGGATTTCA CCCCACAGCGTGTAAAAATATCCCTTGTTGGTCAAGGAATGTCTGTTACACAAACTTTCGATTGGAAGCTTGCCGCTAAC AGTATTGGAGAATAG
Upstream 100 bases:
>100_bases TGGAAGATGCATTAATTGAAGTGTTATGCCATCGCATCAGCGTGTGTTGGCTTAAACTATGCCTCCAGGGTTTCCTGCTT TCCTCAGAGATACACTGCAG
Downstream 100 bases:
>100_bases TATGTTTGGAAATAAGTCCAACCGTAGTGATCGTAATGTCGTCGATACTTTGATTGGTCCGCAAGCAGTGATAACTGGTG ATATCAGCTTCAGCGGAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MQRPIFHRTLSIVSSQRSNMSLRWILLVVFWLVSLALTWGVASHSVVPHLAETEAQLRQSRQIQASQTHQIQKLQQRQIN LEISDQISRAANVDIQSLLAERDEQIAALRADVAFYERLVGATAQRKGLNTHSIEFVRKPSGVWDYNVVLTQNLNRGAIS QGQLRFSVDGVRVGKLTTISWNDLHQKTDVPGQPYSFRYFQQLQGSVMLPLDFTPQRVKISLVGQGMSVTQTFDWKLAAN SIGE
Sequences:
>Translated_244_residues MQRPIFHRTLSIVSSQRSNMSLRWILLVVFWLVSLALTWGVASHSVVPHLAETEAQLRQSRQIQASQTHQIQKLQQRQIN LEISDQISRAANVDIQSLLAERDEQIAALRADVAFYERLVGATAQRKGLNTHSIEFVRKPSGVWDYNVVLTQNLNRGAIS QGQLRFSVDGVRVGKLTTISWNDLHQKTDVPGQPYSFRYFQQLQGSVMLPLDFTPQRVKISLVGQGMSVTQTFDWKLAAN SIGE >Mature_244_residues MQRPIFHRTLSIVSSQRSNMSLRWILLVVFWLVSLALTWGVASHSVVPHLAETEAQLRQSRQIQASQTHQIQKLQQRQIN LEISDQISRAANVDIQSLLAERDEQIAALRADVAFYERLVGATAQRKGLNTHSIEFVRKPSGVWDYNVVLTQNLNRGAIS QGQLRFSVDGVRVGKLTTISWNDLHQKTDVPGQPYSFRYFQQLQGSVMLPLDFTPQRVKISLVGQGMSVTQTFDWKLAAN SIGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27607; Mature: 27607
Theoretical pI: Translated: 10.61; Mature: 10.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRPIFHRTLSIVSSQRSNMSLRWILLVVFWLVSLALTWGVASHSVVPHLAETEAQLRQS CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH RQIQASQTHQIQKLQQRQINLEISDQISRAANVDIQSLLAERDEQIAALRADVAFYERLV HCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GATAQRKGLNTHSIEFVRKPSGVWDYNVVLTQNLNRGAISQGQLRFSVDGVRVGKLTTIS CCHHHHCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEEECCEEECEEEEEE WNDLHQKTDVPGQPYSFRYFQQLQGSVMLPLDFTPQRVKISLVGQGMSVTQTFDWKLAAN HHHHHHHCCCCCCCCCHHHHHHHCCCEEEEECCCCCEEEEEEEECCCEEEEEECEEECCC SIGE CCCC >Mature Secondary Structure MQRPIFHRTLSIVSSQRSNMSLRWILLVVFWLVSLALTWGVASHSVVPHLAETEAQLRQS CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH RQIQASQTHQIQKLQQRQINLEISDQISRAANVDIQSLLAERDEQIAALRADVAFYERLV HCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GATAQRKGLNTHSIEFVRKPSGVWDYNVVLTQNLNRGAISQGQLRFSVDGVRVGKLTTIS CCHHHHCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEEECCEEECEEEEEE WNDLHQKTDVPGQPYSFRYFQQLQGSVMLPLDFTPQRVKISLVGQGMSVTQTFDWKLAAN HHHHHHHCCCCCCCCCHHHHHHHCCCEEEEECCCCCEEEEEEEECCCEEEEEECEEECCC SIGE CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA