Definition | Xylella fastidiosa Temecula1, complete genome. |
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Accession | NC_004556 |
Length | 2,519,802 |
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The map label for this gene is mrp [H]
Identifier: 77747689
GI number: 77747689
Start: 1563241
End: 1564095
Strand: Reverse
Name: mrp [H]
Synonym: PD1336
Alternate gene names: 77747689
Gene position: 1564095-1563241 (Counterclockwise)
Preceding gene: 28199223
Following gene: 28199217
Centisome position: 62.07
GC content: 53.8
Gene sequence:
>855_bases TTGAGTAACACATTTCCCCGAGTCAGCCGCCACGCTGTCCAAACTGGTCTCTCTCCACATCCACGCGTGCGTAATGTCAT TGCGGTTGGTTCGGGCAAGGGTGGGGTAGGCAAGTCAACGATTGCGGTCAATCTAGCTGTTGCGTTGCAGCGGACGGGTG TTCGGGTGGGGCTGCTGGATGCAGATATTTACGGGCCGAGTGTGCCGGCGATGCTGGGTTTAAGTGGGCGTCCGGAGAGT CCAGACAATAAATTGATTGAGCCATTGCGTGCATTTGGAATTGAGGCAATGTCGATCGGGCTGCTGATTGATGTTGATAC CCCGATGATTTGGCGCGGTCCAATGGCCACCTCTGCGCTGACTCAATTGTTCAATGACACTTTGTGGGGTGATCTTGACT ATCTGTTGATTGATTTGCCGCCGGGCACTGGTGATATCCAACTGACCTTATCGCAGAAGATTCCTGTGGCAGGTGCTGTC ATTGTGACCACACCCCAGGACATTGCCACGCTGGATGCGCGTAAAGCGCTGAAAATGTTTGAAAAGGTGAATGTACCGGT CCTTGGTATCGTCGAGAATATGGCGATGCACTGTTGCCGACAATGTGGACATGTGGAACATCTGTTTGGTGAAGGAGGCG CGCAGCGGATGGCAGAGCACTACCATGTGCCATTGCTTGGGTCATTGCCATTGGACATTGTAATTCGCGAGCATGGTGAT TTGGGTCAGCCGATTACGGTTGCTGCACCTAAAGGGAGCGTTGGGCAAGCCTATGCTGCTGTTGCTGCCTGTCTGGCGGC GGAATTGGCCAAGCGTCCGCGTGCTGCGATTCCGATGACCACAACATTGGGTTGA
Upstream 100 bases:
>100_bases ATGTTGTATCGCGGGCAGGCTGCCTCTTGGCTGAATCCTGCGAATGAGCGAAGATGGCGGCGTCACCACCGATGAGCGCG CTTGTGCTGCGCCCCTGCAA
Downstream 100 bases:
>100_bases GCGGTGCGGCAATATGCTGTGTTGCTGAAAACAGTAATGTCTGCAATAGGCTCACTTTCTTGGTGCGTTGCTGAAGTGCG TTTTACTTTATTTAGTCATC
Product: polysaccharide export protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MSNTFPRVSRHAVQTGLSPHPRVRNVIAVGSGKGGVGKSTIAVNLAVALQRTGVRVGLLDADIYGPSVPAMLGLSGRPES PDNKLIEPLRAFGIEAMSIGLLIDVDTPMIWRGPMATSALTQLFNDTLWGDLDYLLIDLPPGTGDIQLTLSQKIPVAGAV IVTTPQDIATLDARKALKMFEKVNVPVLGIVENMAMHCCRQCGHVEHLFGEGGAQRMAEHYHVPLLGSLPLDIVIREHGD LGQPITVAAPKGSVGQAYAAVAACLAAELAKRPRAAIPMTTTLG
Sequences:
>Translated_284_residues MSNTFPRVSRHAVQTGLSPHPRVRNVIAVGSGKGGVGKSTIAVNLAVALQRTGVRVGLLDADIYGPSVPAMLGLSGRPES PDNKLIEPLRAFGIEAMSIGLLIDVDTPMIWRGPMATSALTQLFNDTLWGDLDYLLIDLPPGTGDIQLTLSQKIPVAGAV IVTTPQDIATLDARKALKMFEKVNVPVLGIVENMAMHCCRQCGHVEHLFGEGGAQRMAEHYHVPLLGSLPLDIVIREHGD LGQPITVAAPKGSVGQAYAAVAACLAAELAKRPRAAIPMTTTLG >Mature_283_residues SNTFPRVSRHAVQTGLSPHPRVRNVIAVGSGKGGVGKSTIAVNLAVALQRTGVRVGLLDADIYGPSVPAMLGLSGRPESP DNKLIEPLRAFGIEAMSIGLLIDVDTPMIWRGPMATSALTQLFNDTLWGDLDYLLIDLPPGTGDIQLTLSQKIPVAGAVI VTTPQDIATLDARKALKMFEKVNVPVLGIVENMAMHCCRQCGHVEHLFGEGGAQRMAEHYHVPLLGSLPLDIVIREHGDL GQPITVAAPKGSVGQAYAAVAACLAAELAKRPRAAIPMTTTLG
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI157384956, Length=273, Percent_Identity=47.2527472527472, Blast_Score=252, Evalue=3e-67, Organism=Homo sapiens, GI6912540, Length=217, Percent_Identity=43.3179723502304, Blast_Score=174, Evalue=7e-44, Organism=Homo sapiens, GI118572611, Length=247, Percent_Identity=38.8663967611336, Blast_Score=172, Evalue=2e-43, Organism=Escherichia coli, GI87082045, Length=270, Percent_Identity=54.8148148148148, Blast_Score=293, Evalue=9e-81, Organism=Caenorhabditis elegans, GI25143050, Length=261, Percent_Identity=38.3141762452107, Blast_Score=165, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6322188, Length=219, Percent_Identity=39.2694063926941, Blast_Score=181, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6321347, Length=251, Percent_Identity=35.0597609561753, Blast_Score=143, Evalue=3e-35, Organism=Drosophila melanogaster, GI221511043, Length=249, Percent_Identity=40.9638554216867, Blast_Score=204, Evalue=6e-53, Organism=Drosophila melanogaster, GI24667611, Length=218, Percent_Identity=43.5779816513761, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI19921440, Length=239, Percent_Identity=39.3305439330544, Blast_Score=141, Evalue=5e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR000808 [H]
Pfam domain/function: PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 29964; Mature: 29833
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: PS01215 MRP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNTFPRVSRHAVQTGLSPHPRVRNVIAVGSGKGGVGKSTIAVNLAVALQRTGVRVGLLD CCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEEECCCCEEEEEE ADIYGPSVPAMLGLSGRPESPDNKLIEPLRAFGIEAMSIGLLIDVDTPMIWRGPMATSAL CCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEECCCCEEECCCCHHHHH TQLFNDTLWGDLDYLLIDLPPGTGDIQLTLSQKIPVAGAVIVTTPQDIATLDARKALKMF HHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHH EKVNVPVLGIVENMAMHCCRQCGHVEHLFGEGGAQRMAEHYHVPLLGSLPLDIVIREHGD HHCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHCCCCEECCCCEEEEEECCCC LGQPITVAAPKGSVGQAYAAVAACLAAELAKRPRAAIPMTTTLG CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCC >Mature Secondary Structure SNTFPRVSRHAVQTGLSPHPRVRNVIAVGSGKGGVGKSTIAVNLAVALQRTGVRVGLLD CCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEEECCCCEEEEEE ADIYGPSVPAMLGLSGRPESPDNKLIEPLRAFGIEAMSIGLLIDVDTPMIWRGPMATSAL CCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEECCCCEEECCCCHHHHH TQLFNDTLWGDLDYLLIDLPPGTGDIQLTLSQKIPVAGAVIVTTPQDIATLDARKALKMF HHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHH EKVNVPVLGIVENMAMHCCRQCGHVEHLFGEGGAQRMAEHYHVPLLGSLPLDIVIREHGD HHCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHCCCCEECCCCEEEEEECCCC LGQPITVAAPKGSVGQAYAAVAACLAAELAKRPRAAIPMTTTLG CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]