Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
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Accession | NC_007494 |
Length | 943,016 |
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The map label for this gene is yflP [H]
Identifier: 77465819
GI number: 77465819
Start: 936336
End: 937280
Strand: Reverse
Name: yflP [H]
Synonym: RSP_1420
Alternate gene names: 77465819
Gene position: 937280-936336 (Counterclockwise)
Preceding gene: 77465820
Following gene: 77465818
Centisome position: 99.39
GC content: 69.31
Gene sequence:
>945_bases ATGACACGTTTCATTCTGGCAAGCCTGATGGCGGGCGCTCTGGCGCTGCCGGCGCTCGCTGCCGATTACACGATCCTTGC CCCCGCCGCGCCCGGTGGCGGCTGGGATCAGACCGCCCGCACCATGCAGGAGGTGCTGCGGTCCGAAGGCATCTCGGACA GCGTGCAGGTCCAGAACGTGCCGGGCGCGGGCGGCACCGTGGGGCTCGCGCAGTTCGTGGCTTCGGCGGCGGGCGACCCG AGCCAGCTCATCGTCGGCGGCTATGTGATGGTGGGCGCGATCCTCACCAACGGCTCGCCCGTGGGTCTCGATGACGTGAC GCCCGTCGCGCGCCTGACCGGGGAATATGAGGCCATCGTCGTGCCGGCCTCGTCGCCGATCCAGACGGTCGGCGAGCTCG TCGATCAATTGAAGGCGGATCCCGGCGCCGTGTCCTGGGCCGGGGGATCGGCGGGCGGCACCGACCATATCGCGGTGGGG CTGTTGGCCAAGGCGGCCGGGGTCGATCCGACGAAGATCAACTACATCGCCTTTTCGGGCGGCGGCGAGGCGCTGGCGGC GATCCTCGGCAGCCAGGTGACGGCGGGTGTCTCGGGGCTGAGCGAGTTCCTGCCGCAGGTCGAGGCGGGCACGATGCGGC TTCTGGCCGTCACGGCGCCGGAGCGGCTCGAGGGGGTCGATGCGCCCACGCTGGCCGAGGCGGGCTATGACGTGGTGTTG CAGAACTGGCGGATGATCGCTGCGGCGCCTGGGATCTCTGACGAGCAGAAGGCCGCAATTCTGGCCGACATCGAGAAGAT GAACGCGTCCGAGGGCTGGCAGAAGGCGCTGGCCTCGAAAGGCTGGGCCAACACCTGGCTCGCCGGCGACGCCTTCGCGG AGCAGCTGGCCAAGGACAGGGAGGCAACGGAAGGGATCCTGCGGGAGATCGGTCTCGTCAAATGA
Upstream 100 bases:
>100_bases CGTCCGCGGGATGAGACTGTCGCGGTGACGATCGGTCGCAGGCCGCCGGAGGAGGACCGGCCCCTGCCTCGGGACCGACG TTCCACGAGGGAGGACAGTC
Downstream 100 bases:
>100_bases GGCACCGCTTCCCGGACAGTCCGCGCCGCCCCGACCGCGCCGCGGTGGTGATCGGTCTGCTCTTGGCGGGCCTCGGCGGG CTTCTGCTGTGGGAGGCGCA
Product: TRAP-T family transporter periplasmic binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MTRFILASLMAGALALPALAADYTILAPAAPGGGWDQTARTMQEVLRSEGISDSVQVQNVPGAGGTVGLAQFVASAAGDP SQLIVGGYVMVGAILTNGSPVGLDDVTPVARLTGEYEAIVVPASSPIQTVGELVDQLKADPGAVSWAGGSAGGTDHIAVG LLAKAAGVDPTKINYIAFSGGGEALAAILGSQVTAGVSGLSEFLPQVEAGTMRLLAVTAPERLEGVDAPTLAEAGYDVVL QNWRMIAAAPGISDEQKAAILADIEKMNASEGWQKALASKGWANTWLAGDAFAEQLAKDREATEGILREIGLVK
Sequences:
>Translated_314_residues MTRFILASLMAGALALPALAADYTILAPAAPGGGWDQTARTMQEVLRSEGISDSVQVQNVPGAGGTVGLAQFVASAAGDP SQLIVGGYVMVGAILTNGSPVGLDDVTPVARLTGEYEAIVVPASSPIQTVGELVDQLKADPGAVSWAGGSAGGTDHIAVG LLAKAAGVDPTKINYIAFSGGGEALAAILGSQVTAGVSGLSEFLPQVEAGTMRLLAVTAPERLEGVDAPTLAEAGYDVVL QNWRMIAAAPGISDEQKAAILADIEKMNASEGWQKALASKGWANTWLAGDAFAEQLAKDREATEGILREIGLVK >Mature_313_residues TRFILASLMAGALALPALAADYTILAPAAPGGGWDQTARTMQEVLRSEGISDSVQVQNVPGAGGTVGLAQFVASAAGDPS QLIVGGYVMVGAILTNGSPVGLDDVTPVARLTGEYEAIVVPASSPIQTVGELVDQLKADPGAVSWAGGSAGGTDHIAVGL LAKAAGVDPTKINYIAFSGGGEALAAILGSQVTAGVSGLSEFLPQVEAGTMRLLAVTAPERLEGVDAPTLAEAGYDVVLQ NWRMIAAAPGISDEQKAAILADIEKMNASEGWQKALASKGWANTWLAGDAFAEQLAKDREATEGILREIGLVK
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 31860; Mature: 31729
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRFILASLMAGALALPALAADYTILAPAAPGGGWDQTARTMQEVLRSEGISDSVQVQNV CHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEC PGAGGTVGLAQFVASAAGDPSQLIVGGYVMVGAILTNGSPVGLDDVTPVARLTGEYEAIV CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCEEEE VPASSPIQTVGELVDQLKADPGAVSWAGGSAGGTDHIAVGLLAKAAGVDPTKINYIAFSG EECCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECC GGEALAAILGSQVTAGVSGLSEFLPQVEAGTMRLLAVTAPERLEGVDAPTLAEAGYDVVL CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHCCCCCCHHHHCCHHHHH QNWRMIAAAPGISDEQKAAILADIEKMNASEGWQKALASKGWANTWLAGDAFAEQLAKDR HCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH EATEGILREIGLVK HHHHHHHHHHCCCC >Mature Secondary Structure TRFILASLMAGALALPALAADYTILAPAAPGGGWDQTARTMQEVLRSEGISDSVQVQNV HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEC PGAGGTVGLAQFVASAAGDPSQLIVGGYVMVGAILTNGSPVGLDDVTPVARLTGEYEAIV CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCEEEE VPASSPIQTVGELVDQLKADPGAVSWAGGSAGGTDHIAVGLLAKAAGVDPTKINYIAFSG EECCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECC GGEALAAILGSQVTAGVSGLSEFLPQVEAGTMRLLAVTAPERLEGVDAPTLAEAGYDVVL CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHCCCCCCHHHHCCHHHHH QNWRMIAAAPGISDEQKAAILADIEKMNASEGWQKALASKGWANTWLAGDAFAEQLAKDR HCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH EATEGILREIGLVK HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9272861; 9384377 [H]