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The map label for this gene is yvrB [H]

Identifier: 77465393

GI number: 77465393

Start: 455766

End: 456800

Strand: Reverse

Name: yvrB [H]

Synonym: RSP_3391

Alternate gene names: 77465393

Gene position: 456800-455766 (Counterclockwise)

Preceding gene: 77465394

Following gene: 77465392

Centisome position: 48.44

GC content: 73.82

Gene sequence:

>1035_bases
ATGACGGTCGCGGCAACCTTCGGTCCCCGGCCCGCCCTCTGGCTGGGGCTTCTGGGGGCTGCCGCGCTCGGGCTTGCGAT
CCTGGCCGGCGTGGTGATCGGCGAGACGCCGCTGCCCCTGCCCACGGTGGCCGCGACCTTCGCCAACCGGATCTGGGGCG
CGGGGCTCGCCGTCGATCCGATCGAGGCGGGCATCGTCTGGAACTACCGGCTGCCGCGGACGCTGGTCGCGGCGGCCTGC
GGGGCGGGACTCGCGCTCTCGGGAGTGGTGCTGCAGTCGCTGGTGCGGAATGCGCTGGCCGATCCCTATCTGCTCGGCGT
CTCGGCCGGCGCCTCGACGGGGGCGGTCGCGGTCGCGATCCTCGGCGTCGGGGGCGGGCTCGTCGGGCTTTCGGCCGGCG
CCTTCGGCGGAGCCCTCCTCGCCTTCGCGCTGGTGGCGCTTCTGGCGCGCGCGGCGGGCGGGGGATCGGCCACGCTCGTG
CTGGCGGGGATCGCGGGCTCGCAGCTCTTCAACGCGCTCACCTCGTTCTTCATCGCCCGCTCGGCCAGTGCCGAACAGGC
GCGCGGCATCATGTTCTGGCTGCTGGGAAATCTCTCGGGCGTGCGCTGGCCCGACGTGACGCTCGCCCTGCCGGCCGCGC
TGGCGGGGCTTCTCCTCTGCCTCTGGCATATCCGCGCGATGGATGCCTTCTCCTTCGGCACCCAGTCGGCGAAGGCCCTG
GGCGTGCCCGTGCGCCGGGTGCAGGCGGTGCTGATCGGCATCACCACGCTGATGACGGCGGTGATGGTGAGCCTCGTCGG
CTCCATCGGCTTCGTGGGCCTCGTCGTGCCCCATGCCGTGCGGCTCGTGGCCGGGCCGCGCCACGGCGCGCTCGTGCCTT
GGGCGGCGCTGGCGGGCGCCATCTTCCTCATCGCGGCCGATGTGGTCTCGCGGGTGCTGATCGCGGGGCAGGTGGTGCCC
ATCGGCGTCGTCACGGCCCTCGTGGGCGCCCCGGGCTTCGCCCTCATCCTCATCCGCAACCGGCGGCGGCCATGA

Upstream 100 bases:

>100_bases
GTCGCATCGTCGTGCTGGACGCCCATGCCATGGATCCCTCGATCCGCAATGTGGATGCGCTCGAGACGCTGGCCGACGCG
CTGCCCGCGCTGGGGCTCGA

Downstream 100 bases:

>100_bases
GGATCTCGGTCTTTGAGGCAGGCTGGCGGGCCGGCGGGCGCGCCATCGTCGCGGATGTGACGCTCGAGGTGGCGGAGGGC
GAGACCTTCGGGCTGATCGG

Product: ABC Fe3+-siderophores transporter, inner membrane subunit

Products: ADP; phosphate; cob(I)alamin [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MTVAATFGPRPALWLGLLGAAALGLAILAGVVIGETPLPLPTVAATFANRIWGAGLAVDPIEAGIVWNYRLPRTLVAAAC
GAGLALSGVVLQSLVRNALADPYLLGVSAGASTGAVAVAILGVGGGLVGLSAGAFGGALLAFALVALLARAAGGGSATLV
LAGIAGSQLFNALTSFFIARSASAEQARGIMFWLLGNLSGVRWPDVTLALPAALAGLLLCLWHIRAMDAFSFGTQSAKAL
GVPVRRVQAVLIGITTLMTAVMVSLVGSIGFVGLVVPHAVRLVAGPRHGALVPWAALAGAIFLIAADVVSRVLIAGQVVP
IGVVTALVGAPGFALILIRNRRRP

Sequences:

>Translated_344_residues
MTVAATFGPRPALWLGLLGAAALGLAILAGVVIGETPLPLPTVAATFANRIWGAGLAVDPIEAGIVWNYRLPRTLVAAAC
GAGLALSGVVLQSLVRNALADPYLLGVSAGASTGAVAVAILGVGGGLVGLSAGAFGGALLAFALVALLARAAGGGSATLV
LAGIAGSQLFNALTSFFIARSASAEQARGIMFWLLGNLSGVRWPDVTLALPAALAGLLLCLWHIRAMDAFSFGTQSAKAL
GVPVRRVQAVLIGITTLMTAVMVSLVGSIGFVGLVVPHAVRLVAGPRHGALVPWAALAGAIFLIAADVVSRVLIAGQVVP
IGVVTALVGAPGFALILIRNRRRP
>Mature_343_residues
TVAATFGPRPALWLGLLGAAALGLAILAGVVIGETPLPLPTVAATFANRIWGAGLAVDPIEAGIVWNYRLPRTLVAAACG
AGLALSGVVLQSLVRNALADPYLLGVSAGASTGAVAVAILGVGGGLVGLSAGAFGGALLAFALVALLARAAGGGSATLVL
AGIAGSQLFNALTSFFIARSASAEQARGIMFWLLGNLSGVRWPDVTLALPAALAGLLLCLWHIRAMDAFSFGTQSAKALG
VPVRRVQAVLIGITTLMTAVMVSLVGSIGFVGLVVPHAVRLVAGPRHGALVPWAALAGAIFLIAADVVSRVLIAGQVVPI
GVVTALVGAPGFALILIRNRRRP

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788004, Length=280, Percent_Identity=41.4285714285714, Blast_Score=141, Evalue=5e-35,
Organism=Escherichia coli, GI1790740, Length=276, Percent_Identity=36.9565217391304, Blast_Score=137, Evalue=8e-34,
Organism=Escherichia coli, GI1790741, Length=293, Percent_Identity=35.1535836177474, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1786805, Length=323, Percent_Identity=34.0557275541796, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1786804, Length=280, Percent_Identity=31.0714285714286, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1786347, Length=280, Percent_Identity=28.9285714285714, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 34392; Mature: 34261

Theoretical pI: Translated: 12.17; Mature: 12.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVAATFGPRPALWLGLLGAAALGLAILAGVVIGETPLPLPTVAATFANRIWGAGLAVDP
CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEECC
IEAGIVWNYRLPRTLVAAACGAGLALSGVVLQSLVRNALADPYLLGVSAGASTGAVAVAI
CCCCEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHEEHE
LGVGGGLVGLSAGAFGGALLAFALVALLARAAGGGSATLVLAGIAGSQLFNALTSFFIAR
EECCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHHH
SASAEQARGIMFWLLGNLSGVRWPDVTLALPAALAGLLLCLWHIRAMDAFSFGTQSAKAL
CCCHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
GVPVRRVQAVLIGITTLMTAVMVSLVGSIGFVGLVVPHAVRLVAGPRHGALVPWAALAGA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
IFLIAADVVSRVLIAGQVVPIGVVTALVGAPGFALILIRNRRRP
HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEECCCCC
>Mature Secondary Structure 
TVAATFGPRPALWLGLLGAAALGLAILAGVVIGETPLPLPTVAATFANRIWGAGLAVDP
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEECC
IEAGIVWNYRLPRTLVAAACGAGLALSGVVLQSLVRNALADPYLLGVSAGASTGAVAVAI
CCCCEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHEEHE
LGVGGGLVGLSAGAFGGALLAFALVALLARAAGGGSATLVLAGIAGSQLFNALTSFFIAR
EECCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHHH
SASAEQARGIMFWLLGNLSGVRWPDVTLALPAALAGLLLCLWHIRAMDAFSFGTQSAKAL
CCCHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
GVPVRRVQAVLIGITTLMTAVMVSLVGSIGFVGLVVPHAVRLVAGPRHGALVPWAALAGA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
IFLIAADVVSRVLIAGQVVPIGVVTALVGAPGFALILIRNRRRP
HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; cob(I)alamin [Periplasm]; H2O [C]

Specific reaction: ATP + cob(I)alamin [Periplasm] + H2O = ADP + phosphate + cob(I)alamin [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]