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The map label for this gene is ugpB [H]

Identifier: 77465295

GI number: 77465295

Start: 347727

End: 349022

Strand: Reverse

Name: ugpB [H]

Synonym: RSP_3290

Alternate gene names: 77465295

Gene position: 349022-347727 (Counterclockwise)

Preceding gene: 77465296

Following gene: 77465294

Centisome position: 37.01

GC content: 64.66

Gene sequence:

>1296_bases
ATGAAACGTCGCACATTCCTCACCGCCACGGCGCTTGCGTTGATCGTGCAGGCGGGTGCCGCCGCGGCCCAGACCGAGAT
CAGCTGGTGGCACGCCATGACGGGCGCCAATGCGGAAGTGGTCGAGAAGATCGCCGCGGATTTCAACGCGAGCCAGTCGG
ACTACAAGGTGACAGCGGTCTTCAAGGGCACCTACCCCGAGACGCTGAACGCCGGCATCGCAGCCTTCCGCGCCGGTCAG
GCCCCCGACATCATCCAGGTCTTCGACGTGGGCACCGGCGTCATGATGGCGGCCGAGGGCGCGATCAAGCCGGTGGCCGA
GGTGCTGGGCGACAGCTTCGACAAATCGGCCTACCTGCCGGGGATCGTGGCCTATTATTCCAAGCCCGACGGCACGATGC
TGTCCTTCCCCTACAACTCGTCCTCGCCGATCCTCTATTACAACAAGGACATCTTCGAGAAGGCGGGCCTCGATGCAGAC
ACCCCGCCCAAGACCTGGACCGAGGTCTGGGACATGGCGAAGAAGATCAAGGAGAGCGGCGCCGCCCCCTGCGGCTACAC
CTCGACCTGGCTCACCTGGATCCATACCGAGAATTTCGCGGCCTGGAACGACGTGCCCTTCGCCACGAACGAGAACGGGC
TCGCCGATGTGAATGCCGAGCTGAAGATCAACGAGCCGATCTTCGTCAACCACTTCCAGGCGCTGGCCGATCTCGCCAAG
GACGGCACGTTCAAATACGGCGGCCGCACGTCCGAGGCCAAACAGATCTTCCTTGCGGGCGAATGCGGGATCTTCACCGA
AAGCTCGGGCGGGCTCGGCGACATCGTGAAATCGGGCATGAACTACGGCATCGGCCAGCTGCCCTATGACGAGGCGGGCA
ACGGGCCGCAGAACACGGTGCCGGGCGGCGCAAGCCTCTGGGTGATGGGCGGCAAGTCGGACGAGACCTATGAGGGCGTC
GCCGCCTTCTTCACCTATCTCTCGCAGACCGACGTGCAGGAATATCTGCACCAGACGTCGGGCTATCTGCCGGTGACGAT
GGAGGCCTACGAGGCGACCAAGGCCTCGGGCTTCTACGAGAAGAACCCGGGCCGCGAGGTGCCGATCACCCAGATGATGG
GCAAGGAGCCGACCGCCAACTCCAAGGGCGTGCGCCTCGTGAACCTGCCGCAGGTGCGCGACATCGAGAACGAGGAGTTC
GAGAAGATGCTCGCCGGAGAGCAGACCGCGCAGGAGGCGCTCGACGCCGCCGTCTCGCGCGGCAACGAGGCGATCCGCCA
GGCCATCGGCGGCTGA

Upstream 100 bases:

>100_bases
CGGGAGAGGAGGCCCGCTCCGGTCAGCAGAATGTCGCACCACCGTCATAGGGGCCCGCTATGCCGCACGGCATCCGGCCA
TCCAGAAGGGAGAGAAGCCC

Downstream 100 bases:

>100_bases
CGGACATGAGGCCGCCCGGGTTTCGGCCCGGGCGGCCCCTTCGCCCATGCATCGCGCGCATTTCCCCCACCGCCTGCTTC
CGTGGCTGCTGGTCGCCCCG

Product: ABC glycerol-3-phosphate transporter, periplasmic binding protein, UgpB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MKRRTFLTATALALIVQAGAAAAQTEISWWHAMTGANAEVVEKIAADFNASQSDYKVTAVFKGTYPETLNAGIAAFRAGQ
APDIIQVFDVGTGVMMAAEGAIKPVAEVLGDSFDKSAYLPGIVAYYSKPDGTMLSFPYNSSSPILYYNKDIFEKAGLDAD
TPPKTWTEVWDMAKKIKESGAAPCGYTSTWLTWIHTENFAAWNDVPFATNENGLADVNAELKINEPIFVNHFQALADLAK
DGTFKYGGRTSEAKQIFLAGECGIFTESSGGLGDIVKSGMNYGIGQLPYDEAGNGPQNTVPGGASLWVMGGKSDETYEGV
AAFFTYLSQTDVQEYLHQTSGYLPVTMEAYEATKASGFYEKNPGREVPITQMMGKEPTANSKGVRLVNLPQVRDIENEEF
EKMLAGEQTAQEALDAAVSRGNEAIRQAIGG

Sequences:

>Translated_431_residues
MKRRTFLTATALALIVQAGAAAAQTEISWWHAMTGANAEVVEKIAADFNASQSDYKVTAVFKGTYPETLNAGIAAFRAGQ
APDIIQVFDVGTGVMMAAEGAIKPVAEVLGDSFDKSAYLPGIVAYYSKPDGTMLSFPYNSSSPILYYNKDIFEKAGLDAD
TPPKTWTEVWDMAKKIKESGAAPCGYTSTWLTWIHTENFAAWNDVPFATNENGLADVNAELKINEPIFVNHFQALADLAK
DGTFKYGGRTSEAKQIFLAGECGIFTESSGGLGDIVKSGMNYGIGQLPYDEAGNGPQNTVPGGASLWVMGGKSDETYEGV
AAFFTYLSQTDVQEYLHQTSGYLPVTMEAYEATKASGFYEKNPGREVPITQMMGKEPTANSKGVRLVNLPQVRDIENEEF
EKMLAGEQTAQEALDAAVSRGNEAIRQAIGG
>Mature_431_residues
MKRRTFLTATALALIVQAGAAAAQTEISWWHAMTGANAEVVEKIAADFNASQSDYKVTAVFKGTYPETLNAGIAAFRAGQ
APDIIQVFDVGTGVMMAAEGAIKPVAEVLGDSFDKSAYLPGIVAYYSKPDGTMLSFPYNSSSPILYYNKDIFEKAGLDAD
TPPKTWTEVWDMAKKIKESGAAPCGYTSTWLTWIHTENFAAWNDVPFATNENGLADVNAELKINEPIFVNHFQALADLAK
DGTFKYGGRTSEAKQIFLAGECGIFTESSGGLGDIVKSGMNYGIGQLPYDEAGNGPQNTVPGGASLWVMGGKSDETYEGV
AAFFTYLSQTDVQEYLHQTSGYLPVTMEAYEATKASGFYEKNPGREVPITQMMGKEPTANSKGVRLVNLPQVRDIENEEF
EKMLAGEQTAQEALDAAVSRGNEAIRQAIGG

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=415, Percent_Identity=48.433734939759, Blast_Score=399, Evalue=1e-112,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 46413; Mature: 46413

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRTFLTATALALIVQAGAAAAQTEISWWHAMTGANAEVVEKIAADFNASQSDYKVTAV
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEE
FKGTYPETLNAGIAAFRAGQAPDIIQVFDVGTGVMMAAEGAIKPVAEVLGDSFDKSAYLP
EECCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEECCCCHHHHHHHHCCCCCCCCCCC
GIVAYYSKPDGTMLSFPYNSSSPILYYNKDIFEKAGLDADTPPKTWTEVWDMAKKIKESG
CEEEEEECCCCCEEEECCCCCCCEEEECHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCC
AAPCGYTSTWLTWIHTENFAAWNDVPFATNENGLADVNAELKINEPIFVNHFQALADLAK
CCCCCCCHHEEEEEEECCCCCCCCCCCCCCCCCCEECCCEEEECCCEEHHHHHHHHHHHH
DGTFKYGGRTSEAKQIFLAGECGIFTESSGGLGDIVKSGMNYGIGQLPYDEAGNGPQNTV
CCCEECCCCCCCCCEEEEECCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PGGASLWVMGGKSDETYEGVAAFFTYLSQTDVQEYLHQTSGYLPVTMEAYEATKASGFYE
CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCEE
KNPGREVPITQMMGKEPTANSKGVRLVNLPQVRDIENEEFEKMLAGEQTAQEALDAAVSR
CCCCCCCCHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHC
GNEAIRQAIGG
CHHHHHHHHCC
>Mature Secondary Structure
MKRRTFLTATALALIVQAGAAAAQTEISWWHAMTGANAEVVEKIAADFNASQSDYKVTAV
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEE
FKGTYPETLNAGIAAFRAGQAPDIIQVFDVGTGVMMAAEGAIKPVAEVLGDSFDKSAYLP
EECCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEECCCCHHHHHHHHCCCCCCCCCCC
GIVAYYSKPDGTMLSFPYNSSSPILYYNKDIFEKAGLDADTPPKTWTEVWDMAKKIKESG
CEEEEEECCCCCEEEECCCCCCCEEEECHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCC
AAPCGYTSTWLTWIHTENFAAWNDVPFATNENGLADVNAELKINEPIFVNHFQALADLAK
CCCCCCCHHEEEEEEECCCCCCCCCCCCCCCCCCEECCCEEEECCCEEHHHHHHHHHHHH
DGTFKYGGRTSEAKQIFLAGECGIFTESSGGLGDIVKSGMNYGIGQLPYDEAGNGPQNTV
CCCEECCCCCCCCCEEEEECCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PGGASLWVMGGKSDETYEGVAAFFTYLSQTDVQEYLHQTSGYLPVTMEAYEATKASGFYE
CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCEE
KNPGREVPITQMMGKEPTANSKGVRLVNLPQVRDIENEEFEKMLAGEQTAQEALDAAVSR
CCCCCCCCHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHC
GNEAIRQAIGG
CHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]