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The map label for this gene is appB [H]

Identifier: 77465262

GI number: 77465262

Start: 314543

End: 315463

Strand: Reverse

Name: appB [H]

Synonym: RSP_3257

Alternate gene names: 77465262

Gene position: 315463-314543 (Counterclockwise)

Preceding gene: 77465263

Following gene: 77465261

Centisome position: 33.45

GC content: 66.67

Gene sequence:

>921_bases
ATGCCCGCCTATCTCCTTCGCCGCCTGTTCCAGTCGGCCCTGATCCTGCTCGGCGTCTCGCTCGTCACCTTCATCCTGCT
CTATGTGCTGCCGGCCGATCCGGTGCGCCAGATCGCGGGCCGCTCGGCCACGCCGCAGGTGGTCGAGAACATCCGCCGCC
AGCTCGGTCTCGACCAGCCCTTCCTCGTGCAGTACGGTCGCTATCTCTGGGGGCTCATGCAGGGCGATTTCGGGCGCAGC
TACCTGCAGAAGACCGATGTGGCGACGCTGATCGCGGCGCGCCTGCCCGCCACCCTGCAACTGATGGGCGGCGCGATCCT
GTGCGAGCTGGTGCTGGGCCTGACCATGGGCATCGTCGCAGCCCTCCGGCGCGGACGGGCGCTCGATCAGGGGCTGATGA
TCGTCTCCTTCGTCGCGGTCTCGGCACCGCAGTTCGTGGTGAGCCTGCTCCTCCTCTATGTCTTCGCGGTCAAGCTCGGC
TGGTTCCCCATCGGCGGCTACGGCACGCTCTCGCATCTTGTGCTGCCCGCCGTCACGCTCGGGATCCTCGGCTCGGGCTG
GTACAGCCGGATGATGCGCTCGAGCATGATCGACGTGCTGCGTCAGGACTATATCCGCACCGCCCGCGCCAAGGGCCTCA
CGCGCGGCCGCGTGATCCTGCGCCACGCGCTGCCGAACGCGATCCTGCCCATCGTGGCCATGATCGGCATCGACATCGGC
ATCTTCATGGGCGGCATCGTCGTTGTGGAAAGCGTGTTCGGCTGGCCCGGCATCGGCCAGCTGGCCTGGCAGGCCATCCA
GCGCATCGACATCCCGATCATCATGGGCGTCACCATGGTCTCGGCCTGCGCCATCGTGCTGGGCAACCTTCTGGCCGATC
TCGTGACGCCCTTCATCGACCCCCGCATCAAGCTGAAATAA

Upstream 100 bases:

>100_bases
TCATTCCGGGCGCGGCCATCCTTCTTCTGGCGCTCGCCTTCAACCTCGTCGGAGACGCGCTGCGCGACGTGCTCGACCCG
ACCCAGCGCGGGAGGGACTG

Downstream 100 bases:

>100_bases
CAGGACCGACAGGAGAGACCCATGAACAGACTGCTCGCCTCCACCGCCGTGATGCTGGCGCTCGCCCTGCCCGCCGCAGC
CCAGGACTATACGCCCGACC

Product: ABC peptide transporter, inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MPAYLLRRLFQSALILLGVSLVTFILLYVLPADPVRQIAGRSATPQVVENIRRQLGLDQPFLVQYGRYLWGLMQGDFGRS
YLQKTDVATLIAARLPATLQLMGGAILCELVLGLTMGIVAALRRGRALDQGLMIVSFVAVSAPQFVVSLLLLYVFAVKLG
WFPIGGYGTLSHLVLPAVTLGILGSGWYSRMMRSSMIDVLRQDYIRTARAKGLTRGRVILRHALPNAILPIVAMIGIDIG
IFMGGIVVVESVFGWPGIGQLAWQAIQRIDIPIIMGVTMVSACAIVLGNLLADLVTPFIDPRIKLK

Sequences:

>Translated_306_residues
MPAYLLRRLFQSALILLGVSLVTFILLYVLPADPVRQIAGRSATPQVVENIRRQLGLDQPFLVQYGRYLWGLMQGDFGRS
YLQKTDVATLIAARLPATLQLMGGAILCELVLGLTMGIVAALRRGRALDQGLMIVSFVAVSAPQFVVSLLLLYVFAVKLG
WFPIGGYGTLSHLVLPAVTLGILGSGWYSRMMRSSMIDVLRQDYIRTARAKGLTRGRVILRHALPNAILPIVAMIGIDIG
IFMGGIVVVESVFGWPGIGQLAWQAIQRIDIPIIMGVTMVSACAIVLGNLLADLVTPFIDPRIKLK
>Mature_305_residues
PAYLLRRLFQSALILLGVSLVTFILLYVLPADPVRQIAGRSATPQVVENIRRQLGLDQPFLVQYGRYLWGLMQGDFGRSY
LQKTDVATLIAARLPATLQLMGGAILCELVLGLTMGIVAALRRGRALDQGLMIVSFVAVSAPQFVVSLLLLYVFAVKLGW
FPIGGYGTLSHLVLPAVTLGILGSGWYSRMMRSSMIDVLRQDYIRTARAKGLTRGRVILRHALPNAILPIVAMIGIDIGI
FMGGIVVVESVFGWPGIGQLAWQAIQRIDIPIIMGVTMVSACAIVLGNLLADLVTPFIDPRIKLK

Specific function: This protein is a component of an oligopeptide permease, a binding protein-dependent transport system. This APP system can completely substitute for the OPP system in both sporulation and genetic competence, though, unlike OPP, is incapable of transportin

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=306, Percent_Identity=39.5424836601307, Blast_Score=234, Evalue=4e-63,
Organism=Escherichia coli, GI1789888, Length=304, Percent_Identity=36.5131578947368, Blast_Score=206, Evalue=1e-54,
Organism=Escherichia coli, GI1789965, Length=338, Percent_Identity=35.207100591716, Blast_Score=204, Evalue=5e-54,
Organism=Escherichia coli, GI1787761, Length=328, Percent_Identity=38.109756097561, Blast_Score=187, Evalue=9e-49,
Organism=Escherichia coli, GI1787497, Length=307, Percent_Identity=34.5276872964169, Blast_Score=183, Evalue=1e-47,
Organism=Escherichia coli, GI1788504, Length=362, Percent_Identity=24.8618784530387, Blast_Score=119, Evalue=4e-28,
Organism=Escherichia coli, GI1787550, Length=262, Percent_Identity=26.3358778625954, Blast_Score=115, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33351; Mature: 33220

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAYLLRRLFQSALILLGVSLVTFILLYVLPADPVRQIAGRSATPQVVENIRRQLGLDQP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCH
FLVQYGRYLWGLMQGDFGRSYLQKTDVATLIAARLPATLQLMGGAILCELVLGLTMGIVA
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
ALRRGRALDQGLMIVSFVAVSAPQFVVSLLLLYVFAVKLGWFPIGGYGTLSHLVLPAVTL
HHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
GILGSGWYSRMMRSSMIDVLRQDYIRTARAKGLTRGRVILRHALPNAILPIVAMIGIDIG
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
IFMGGIVVVESVFGWPGIGQLAWQAIQRIDIPIIMGVTMVSACAIVLGNLLADLVTPFID
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PRIKLK
CCCCCC
>Mature Secondary Structure 
PAYLLRRLFQSALILLGVSLVTFILLYVLPADPVRQIAGRSATPQVVENIRRQLGLDQP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCH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CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7997159; 9384377 [H]