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The map label for this gene is yhaO [H]

Identifier: 77465230

GI number: 77465230

Start: 272856

End: 274112

Strand: Reverse

Name: yhaO [H]

Synonym: RSP_3216

Alternate gene names: 77465230

Gene position: 274112-272856 (Counterclockwise)

Preceding gene: 77465232

Following gene: 77465229

Centisome position: 29.07

GC content: 71.92

Gene sequence:

>1257_bases
TTGGCGTTCACGTTCCTTCATACGGCCGATCTCCATCTCGACGCGCCGCTGCGGGCTGTGGCGCTGCGCGATCCCGAGCT
TGCAGCCGAGATCGGCGTGGCCTCGCGCACCGCCTTTTCGCGCATCGTGGATCTCTGCCTTGCCGAGGCGGTGGCCTTCC
TCGTGATCGCGGGCGACCTCTGGGACGGAACCTACAGCTCGACCAAGACCCCCCGCTTTCTCAAGCAGGAGCTTTTGCGG
CTCGAGGCCGCGGGGATCGGCTGCTATATCCTGCGCGGCAATCACGATGCGCTGGCGCGGCAGACGGGCGAGCTCGAGGC
GCCGGCCAACACCACCGTCTTCGGCGCCCGCCCCTCGACGGTCGAGCTCTCGATCGACGGCCAGCCGGTGGCCCTCCACG
GGCTGAGCTTCCGCGAGCCGCACGCGCCCGAGAGCCTGCTGCCGCGCTATCCGGCGCCGAAGCCGGGGGCGTTCAACCTA
GGCCTCATGCATACGAGCCTGAACGGCAGCCCGGGGCACGATCCCTACGCGCCCTGCAGCCTCGCCGAGCTCGAGGCCCA
CGGCTACGATTACTGGGCGCTCGGCCATATCCACCGCCGCTTCGTGCATCGGGGGCGCGCGACGGTGGTGATGCCGGGCA
CGCCGCAGGGGCGCGACATCGGCGAGGCGGGCGCGGCCTCGGTCACGCTGGTGCAGGTGGGCGACGACGGGGCGGTCACG
CTCGAAGAGCGCAGCGTGGCGCCGCTGCGCTTCGACCGGCTGGCGCTCGACTGCACGGGGATTGCGGACTGGTCCGACCT
GCTCGCCCATCTCGACCGGGCGCTCCGTGCCGCGGCCGAGGCGCCGCGCGCGGAAGACCATCTGGTGCTGCGTCCGGTGC
TGACCGGGGCCACGCCGCTCGCCTGGCGCATCGCGCGCGATCGCGACCGGCTGACCGAAGAGGCGCGCGCCCTCTCTGCG
GGACGCAGGCTCTGGATCGACAAGCTCGAACTGCGGCTATCGGAGGAAGGCGCAGAGCTGCCCGGCGCGGCCCTGCCCGA
GGATCTCGTCCGCCTCGTTCAGGAGGATCTGCCCGAGGATCCGGCCCTGAACGCCGCGCTTCTTGCGGCCACACAGGAGC
TCGCGCGCGACCTGCCGCCCGAGGCGCGCGATCTGCTGGGGCAGGATGAGGCGGCGATGGCCGCGCTCTGCCGCAGCCTT
CTGGCCGAGGGAACGCCCCTGATCCTCGCCGAGCTTGCGGCGGAGGCGTCGGACTGA

Upstream 100 bases:

>100_bases
CGTCCGCATTCCAGCCGCCCCTCAGAGCCTTGAAGGCCGCGGCGGCGCGCCCCATAGTCGCCCGAGGCGTCCGGAGGGGC
GCGTTCCGCAGGCAGGTCTC

Downstream 100 bases:

>100_bases
TGCGCCTCGACCGGCTCGACCTCACGCGCTACGGCCATTTCACGGACCGGCGGCTCGCATTTCCCGCGCCTGCGCCGGGA
GAGGCGGACCTGCATGTGGT

Product: putative DNA repair exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MAFTFLHTADLHLDAPLRAVALRDPELAAEIGVASRTAFSRIVDLCLAEAVAFLVIAGDLWDGTYSSTKTPRFLKQELLR
LEAAGIGCYILRGNHDALARQTGELEAPANTTVFGARPSTVELSIDGQPVALHGLSFREPHAPESLLPRYPAPKPGAFNL
GLMHTSLNGSPGHDPYAPCSLAELEAHGYDYWALGHIHRRFVHRGRATVVMPGTPQGRDIGEAGAASVTLVQVGDDGAVT
LEERSVAPLRFDRLALDCTGIADWSDLLAHLDRALRAAAEAPRAEDHLVLRPVLTGATPLAWRIARDRDRLTEEARALSA
GRRLWIDKLELRLSEEGAELPGAALPEDLVRLVQEDLPEDPALNAALLAATQELARDLPPEARDLLGQDEAAMAALCRSL
LAEGTPLILAELAAEASD

Sequences:

>Translated_418_residues
MAFTFLHTADLHLDAPLRAVALRDPELAAEIGVASRTAFSRIVDLCLAEAVAFLVIAGDLWDGTYSSTKTPRFLKQELLR
LEAAGIGCYILRGNHDALARQTGELEAPANTTVFGARPSTVELSIDGQPVALHGLSFREPHAPESLLPRYPAPKPGAFNL
GLMHTSLNGSPGHDPYAPCSLAELEAHGYDYWALGHIHRRFVHRGRATVVMPGTPQGRDIGEAGAASVTLVQVGDDGAVT
LEERSVAPLRFDRLALDCTGIADWSDLLAHLDRALRAAAEAPRAEDHLVLRPVLTGATPLAWRIARDRDRLTEEARALSA
GRRLWIDKLELRLSEEGAELPGAALPEDLVRLVQEDLPEDPALNAALLAATQELARDLPPEARDLLGQDEAAMAALCRSL
LAEGTPLILAELAAEASD
>Mature_417_residues
AFTFLHTADLHLDAPLRAVALRDPELAAEIGVASRTAFSRIVDLCLAEAVAFLVIAGDLWDGTYSSTKTPRFLKQELLRL
EAAGIGCYILRGNHDALARQTGELEAPANTTVFGARPSTVELSIDGQPVALHGLSFREPHAPESLLPRYPAPKPGAFNLG
LMHTSLNGSPGHDPYAPCSLAELEAHGYDYWALGHIHRRFVHRGRATVVMPGTPQGRDIGEAGAASVTLVQVGDDGAVTL
EERSVAPLRFDRLALDCTGIADWSDLLAHLDRALRAAAEAPRAEDHLVLRPVLTGATPLAWRIARDRDRLTEEARALSAG
RRLWIDKLELRLSEEGAELPGAALPEDLVRLVQEDLPEDPALNAALLAATQELARDLPPEARDLLGQDEAAMAALCRSLL
AEGTPLILAELAAEASD

Specific function: Unknown

COG id: COG0420

COG function: function code L; DNA repair exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843
- InterPro:   IPR014576 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: NA

Molecular weight: Translated: 44918; Mature: 44787

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFTFLHTADLHLDAPLRAVALRDPELAAEIGVASRTAFSRIVDLCLAEAVAFLVIAGDL
CEEEEEEEECEEECCCCCEEEECCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHEECCC
WDGTYSSTKTPRFLKQELLRLEAAGIGCYILRGNHDALARQTGELEAPANTTVFGARPST
CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCCCCCCCCCEEECCCCCE
VELSIDGQPVALHGLSFREPHAPESLLPRYPAPKPGAFNLGLMHTSLNGSPGHDPYAPCS
EEEEECCCCEEEECCCCCCCCCCHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCC
LAELEAHGYDYWALGHIHRRFVHRGRATVVMPGTPQGRDIGEAGAASVTLVQVGDDGAVT
HHHHHHCCCCEEHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCEEE
LEERSVAPLRFDRLALDCTGIADWSDLLAHLDRALRAAAEAPRAEDHLVLRPVLTGATPL
EECCCCCCEEHHHEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHCCCCCH
AWRIARDRDRLTEEARALSAGRRLWIDKLELRLSEEGAELPGAALPEDLVRLVQEDLPED
HEEHHHHHHHHHHHHHHHHHCHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHCCCC
PALNAALLAATQELARDLPPEARDLLGQDEAAMAALCRSLLAEGTPLILAELAAEASD
CCCCHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
AFTFLHTADLHLDAPLRAVALRDPELAAEIGVASRTAFSRIVDLCLAEAVAFLVIAGDL
EEEEEEEECEEECCCCCEEEECCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHEECCC
WDGTYSSTKTPRFLKQELLRLEAAGIGCYILRGNHDALARQTGELEAPANTTVFGARPST
CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCCCCCCCCCEEECCCCCE
VELSIDGQPVALHGLSFREPHAPESLLPRYPAPKPGAFNLGLMHTSLNGSPGHDPYAPCS
EEEEECCCCEEEECCCCCCCCCCHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCC
LAELEAHGYDYWALGHIHRRFVHRGRATVVMPGTPQGRDIGEAGAASVTLVQVGDDGAVT
HHHHHHCCCCEEHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCEEE
LEERSVAPLRFDRLALDCTGIADWSDLLAHLDRALRAAAEAPRAEDHLVLRPVLTGATPL
EECCCCCCEEHHHEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHCCCCCH
AWRIARDRDRLTEEARALSAGRRLWIDKLELRLSEEGAELPGAALPEDLVRLVQEDLPED
HEEHHHHHHHHHHHHHHHHHCHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHCCCC
PALNAALLAATQELARDLPPEARDLLGQDEAAMAALCRSLLAEGTPLILAELAAEASD
CCCCHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]