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The map label for this gene is rnpA [H]

Identifier: 77461962

GI number: 77461962

Start: 6437849

End: 6438250

Strand: Reverse

Name: rnpA [H]

Synonym: Pfl01_5745

Alternate gene names: 77461962

Gene position: 6438250-6437849 (Counterclockwise)

Preceding gene: NA

Following gene: 77461961

Centisome position: 100.0

GC content: 54.98

Gene sequence:

>402_bases
GTGAGTCAGGACTTCAGTCGGGAAAAGCGTCTGCTTACTCCCCGGCATTTCAAGGCAGTCTTTGACTCCCCTACCGGCAA
GGTTCCGGGGAAAAATCTCCTGCTCCTTGCGCGCAACAACGATCTCGATCACCCCCGTCTCGGGCTGGTTATCGGGAAAA
AGAGCGTCAAGCTCTCCGTCGAGCGCAATCGCCTCAAACGTCTGATGCGCGAATCGTTTCGCCTGCACCAGGATTCACTG
GTCGGCTGGGACATTGTTATCGTCGCGCGCAAAGGTTTGGGTGACGTAGAAAACCCCGAATTGATTCAGCATTTCGGCAA
ACTCTGGAAGCGTCTGGCACGCAACAAGCCGGTACCAGCAGTCAAAACCGAAACTGTAGGGGTAGACAGTCCAGATGCGT
AA

Upstream 100 bases:

>100_bases
TTCCGTGCTCGCATGGCTACCAAGAACGGTCGTGCCGTACTGTCGCGTCGTCGCGCCAAAGGCCGCGCACGTCTGGCAGT
TTGATAATCCGGCACTGGAG

Downstream 100 bases:

>100_bases
ACTGGCACTCGTTCCGATCCGGTTTTATCGCTATGCCATTAGTCCCCTGATGGCCAGTCACTGTCGTTTCTACCCCAGTT
GTTCTTGCTACGCGTATGAA

Product: ribonuclease P

Products: NA

Alternate protein names: RNase P protein; RNaseP protein; Protein C5 [H]

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MSQDFSREKRLLTPRHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRLKRLMRESFRLHQDSL
VGWDIVIVARKGLGDVENPELIQHFGKLWKRLARNKPVPAVKTETVGVDSPDA

Sequences:

>Translated_133_residues
MSQDFSREKRLLTPRHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRLKRLMRESFRLHQDSL
VGWDIVIVARKGLGDVENPELIQHFGKLWKRLARNKPVPAVKTETVGVDSPDA
>Mature_132_residues
SQDFSREKRLLTPRHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSVERNRLKRLMRESFRLHQDSLV
GWDIVIVARKGLGDVENPELIQHFGKLWKRLARNKPVPAVKTETVGVDSPDA

Specific function: RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-lead

COG id: COG0594

COG function: function code J; RNase P protein component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rnpA family [H]

Homologues:

Organism=Escherichia coli, GI1790139, Length=110, Percent_Identity=48.1818181818182, Blast_Score=101, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020568
- InterPro:   IPR014721
- InterPro:   IPR000100
- ProDom:   PD003629 [H]

Pfam domain/function: PF00825 Ribonuclease_P [H]

EC number: =3.1.26.5 [H]

Molecular weight: Translated: 15110; Mature: 14979

Theoretical pI: Translated: 11.21; Mature: 11.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQDFSREKRLLTPRHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSV
CCCCCCCHHHCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCEEEEEH
ERNRLKRLMRESFRLHQDSLVGWDIVIVARKGLGDVENPELIQHFGKLWKRLARNKPVPA
HHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
VKTETVGVDSPDA
EECCCCCCCCCCC
>Mature Secondary Structure 
SQDFSREKRLLTPRHFKAVFDSPTGKVPGKNLLLLARNNDLDHPRLGLVIGKKSVKLSV
CCCCCCHHHCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCEEEEEH
ERNRLKRLMRESFRLHQDSLVGWDIVIVARKGLGDVENPELIQHFGKLWKRLARNKPVPA
HHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
VKTETVGVDSPDA
EECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA