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The map label for this gene is tnsC [H]

Identifier: 77461940

GI number: 77461940

Start: 6413432

End: 6414898

Strand: Reverse

Name: tnsC [H]

Synonym: Pfl01_5723

Alternate gene names: 77461940

Gene position: 6414898-6413432 (Counterclockwise)

Preceding gene: 77461941

Following gene: 77461939

Centisome position: 99.63

GC content: 53.24

Gene sequence:

>1467_bases
ATGACGAGCACTCCTACCTTTGCCAGTTACACGAAGCAGGTCATCTCTGACTACGCAGGCAACCCTCTCATTGAGGCACT
TCCACCTATTTTGTCATGGACAGAGGCGGCGGGTCTGATCGCTAACTTGCCTGGAGAAGCTACGCCTGAGGAGCTTTTGC
TAGATCCGTGGGTTCGGATTCATTGTGTAGATCGACTACGTTCGATCGTGCAGCCTATGTCGATTCACCTAGAACTGGAG
TCCGTTTTTTCGATGCTGATTCGAAGGGGCTACGTCGGCCGCAACCCTCATTCTCCCGAAACGGTCAGACATCTCCATTC
ACTCTCCGGAGCTTCGCGGTTCCATGAGGGTTTCAGGTCTACTGCAGAGACGTTTAGCTTGGTTGGATTAAGCGGCATCG
GTAAATCTACGGCGCTCTGGGCCATTCTCAGCCTGTATCCTCAGACAATTCGACATGAGCGCTTTGAAGGTCGCGCGTTC
GTTCAGACGCAGATTACGTGGCTCAAGCTCGACTGCCCCAGAGATGGATCCTTGGCAGGTTTCTGTCAGGAGTTCTTCAT
TGCAGTGGGCAAAGCGCTGGGTGATGAGGGATACCACAGACGATTTCGTGCCAGAAATATCACCGACTCGCTGCAGCAGA
TGGCGCAGGTGGCGAGCACCTTCTTTATCGGTGCCCTGCTAATCGACGAAATTCAAAACCTTCATGCAGCCAAAACAGGC
GGTAAGGACAGCGTTCTCAATTTCTTCCTTCACCTGGTCAACAACATTGGTATCCCCGTTGTATTCATCGGTACCAATTC
GATGGTGAGCCTGTTTTCCGGAGTTATGCGCAACGCTCGCCGCTGTTGTGGCAATGGGATTATCGAATTTAAGAGGTTCG
AGAAGGATGGCGATGAATGGCGGATGCTTGTCGAAAACCTCTGGAGCTACCAGTGGTGTCAGCAGCAAGCTGAGCTAACG
GATGACATCTTTAATGCGATTTACGAGCACACCCAAGGTGTTACCGACATTCTGGTTAAGCTGTTGATCCTTACACAGCG
CTATGTCATCCAAAGTGGGCTGGAGACTGTCACGGCGGCAGCAATACGAATCGTGAGCGATTCCAAAATGCAGATTCTGA
AGCCCGCACTTGATGCACTGCGCAGCGGCTCCCCTAATAGGATGGCTCAGTTTGATGACCTGCTTCCGGTAGATGAGCAG
ATCGCGGGTATGATGGACTTCGACTTCAGTCCAGACCCTGGCCGCCTGAAGGTTCTGCGCTCGGCCGGACAGCACGTCGC
TGATGCACCTTCCGCAGGTGGGACTGAACGGGCAAAGGTGGCGCCTTCAGTGGTGGCCGTGCCCACGCAGCAGTCTATGG
CCAAGCGGTTGGTTAATACCGAGAACCGGGTGGAGGCACTGCGTGAAGCAGGATGGATAAACACCGATATTTTCGAGTTC
TCACCCGTGTATCGCCGTAGGGATTAA

Upstream 100 bases:

>100_bases
CGCAAGAACCCACAAAAACTGATCATGCCCACCATTTTGCTGGGGCGCGTGGTGCTGTGATCATCGACATGCTGAAGCGA
ATTCGGCCTGGTAATAAGCC

Downstream 100 bases:

>100_bases
GTGACAGAGAGGTCGGAAATGGAGCATAAGTTTCATTTCTTTCCCGAGCCATTTCCAGATGAAACGCTGCATAGCGTTCT
GTCTAGATATGTTCGTCTCT

Product: Tn7-like transposition protein C

Products: NA

Alternate protein names: Protein E [H]

Number of amino acids: Translated: 488; Mature: 487

Protein sequence:

>488_residues
MTSTPTFASYTKQVISDYAGNPLIEALPPILSWTEAAGLIANLPGEATPEELLLDPWVRIHCVDRLRSIVQPMSIHLELE
SVFSMLIRRGYVGRNPHSPETVRHLHSLSGASRFHEGFRSTAETFSLVGLSGIGKSTALWAILSLYPQTIRHERFEGRAF
VQTQITWLKLDCPRDGSLAGFCQEFFIAVGKALGDEGYHRRFRARNITDSLQQMAQVASTFFIGALLIDEIQNLHAAKTG
GKDSVLNFFLHLVNNIGIPVVFIGTNSMVSLFSGVMRNARRCCGNGIIEFKRFEKDGDEWRMLVENLWSYQWCQQQAELT
DDIFNAIYEHTQGVTDILVKLLILTQRYVIQSGLETVTAAAIRIVSDSKMQILKPALDALRSGSPNRMAQFDDLLPVDEQ
IAGMMDFDFSPDPGRLKVLRSAGQHVADAPSAGGTERAKVAPSVVAVPTQQSMAKRLVNTENRVEALREAGWINTDIFEF
SPVYRRRD

Sequences:

>Translated_488_residues
MTSTPTFASYTKQVISDYAGNPLIEALPPILSWTEAAGLIANLPGEATPEELLLDPWVRIHCVDRLRSIVQPMSIHLELE
SVFSMLIRRGYVGRNPHSPETVRHLHSLSGASRFHEGFRSTAETFSLVGLSGIGKSTALWAILSLYPQTIRHERFEGRAF
VQTQITWLKLDCPRDGSLAGFCQEFFIAVGKALGDEGYHRRFRARNITDSLQQMAQVASTFFIGALLIDEIQNLHAAKTG
GKDSVLNFFLHLVNNIGIPVVFIGTNSMVSLFSGVMRNARRCCGNGIIEFKRFEKDGDEWRMLVENLWSYQWCQQQAELT
DDIFNAIYEHTQGVTDILVKLLILTQRYVIQSGLETVTAAAIRIVSDSKMQILKPALDALRSGSPNRMAQFDDLLPVDEQ
IAGMMDFDFSPDPGRLKVLRSAGQHVADAPSAGGTERAKVAPSVVAVPTQQSMAKRLVNTENRVEALREAGWINTDIFEF
SPVYRRRD
>Mature_487_residues
TSTPTFASYTKQVISDYAGNPLIEALPPILSWTEAAGLIANLPGEATPEELLLDPWVRIHCVDRLRSIVQPMSIHLELES
VFSMLIRRGYVGRNPHSPETVRHLHSLSGASRFHEGFRSTAETFSLVGLSGIGKSTALWAILSLYPQTIRHERFEGRAFV
QTQITWLKLDCPRDGSLAGFCQEFFIAVGKALGDEGYHRRFRARNITDSLQQMAQVASTFFIGALLIDEIQNLHAAKTGG
KDSVLNFFLHLVNNIGIPVVFIGTNSMVSLFSGVMRNARRCCGNGIIEFKRFEKDGDEWRMLVENLWSYQWCQQQAELTD
DIFNAIYEHTQGVTDILVKLLILTQRYVIQSGLETVTAAAIRIVSDSKMQILKPALDALRSGSPNRMAQFDDLLPVDEQI
AGMMDFDFSPDPGRLKVLRSAGQHVADAPSAGGTERAKVAPSVVAVPTQQSMAKRLVNTENRVEALREAGWINTDIFEFS
PVYRRRD

Specific function: TnsABC + tnsD promote high-frequency insertion of Tn7 into a specific target site known as att-Tn7 whereas tnsABC + tnsE promote low-frequency insertion into many different sites [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR003959
- InterPro:   IPR021542 [H]

Pfam domain/function: PF00004 AAA; PF11426 Tn7_TnsC [H]

EC number: NA

Molecular weight: Translated: 54428; Mature: 54297

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTPTFASYTKQVISDYAGNPLIEALPPILSWTEAAGLIANLPGEATPEELLLDPWVRI
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHH
HCVDRLRSIVQPMSIHLELESVFSMLIRRGYVGRNPHSPETVRHLHSLSGASRFHEGFRS
HHHHHHHHHHCHHHHEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TAETFSLVGLSGIGKSTALWAILSLYPQTIRHERFEGRAFVQTQITWLKLDCPRDGSLAG
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCCCHHH
FCQEFFIAVGKALGDEGYHRRFRARNITDSLQQMAQVASTFFIGALLIDEIQNLHAAKTG
HHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GKDSVLNFFLHLVNNIGIPVVFIGTNSMVSLFSGVMRNARRCCGNGIIEFKRFEKDGDEW
CHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHH
RMLVENLWSYQWCQQQAELTDDIFNAIYEHTQGVTDILVKLLILTQRYVIQSGLETVTAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIRIVSDSKMQILKPALDALRSGSPNRMAQFDDLLPVDEQIAGMMDFDFSPDPGRLKVLR
HHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHCHHCCCCCCCCHHHHHHH
SAGQHVADAPSAGGTERAKVAPSVVAVPTQQSMAKRLVNTENRVEALREAGWINTDIFEF
HHCCHHCCCCCCCCCCHHHCCCCCEECCCHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHC
SPVYRRRD
CCHHHCCC
>Mature Secondary Structure 
TSTPTFASYTKQVISDYAGNPLIEALPPILSWTEAAGLIANLPGEATPEELLLDPWVRI
CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHH
HCVDRLRSIVQPMSIHLELESVFSMLIRRGYVGRNPHSPETVRHLHSLSGASRFHEGFRS
HHHHHHHHHHCHHHHEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TAETFSLVGLSGIGKSTALWAILSLYPQTIRHERFEGRAFVQTQITWLKLDCPRDGSLAG
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCCCHHH
FCQEFFIAVGKALGDEGYHRRFRARNITDSLQQMAQVASTFFIGALLIDEIQNLHAAKTG
HHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GKDSVLNFFLHLVNNIGIPVVFIGTNSMVSLFSGVMRNARRCCGNGIIEFKRFEKDGDEW
CHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHH
RMLVENLWSYQWCQQQAELTDDIFNAIYEHTQGVTDILVKLLILTQRYVIQSGLETVTAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIRIVSDSKMQILKPALDALRSGSPNRMAQFDDLLPVDEQIAGMMDFDFSPDPGRLKVLR
HHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHCHHCCCCCCCCHHHHHHH
SAGQHVADAPSAGGTERAKVAPSVVAVPTQQSMAKRLVNTENRVEALREAGWINTDIFEF
HHCCHHCCCCCCCCCCHHHCCCCCEECCCHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHC
SPVYRRRD
CCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2156235; 3022239; 1655576; 1317955 [H]