| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yqgH [H]
Identifier: 77461834
GI number: 77461834
Start: 6285448
End: 6287118
Strand: Reverse
Name: yqgH [H]
Synonym: Pfl01_5613
Alternate gene names: 77461834
Gene position: 6287118-6285448 (Counterclockwise)
Preceding gene: 77461835
Following gene: 77461833
Centisome position: 97.65
GC content: 63.08
Gene sequence:
>1671_bases GTGAAACAGAACTCCCTGAAAGGATGGTTCAAGAGCGGCGCCCCGGGCGTCTGGATCAGCGGTGGCGCGGTGTCCATCGC GGTCATCATGACCATTGGCCTGCTGGCGGTGATTGCCGTGCGCGGTCTGGGTCACTTCTGGCCGGCGGATCTGATCCACG CCAGCTATGACGTACCGGGCCAGGGCCAGCATCTGGTCGTGGGCGAGGTGGTGCAGAAAGAAGAAGTGCCGCGCGCCCGT CTGAAGAGCGCCGGCCTGCCGGTGCCGGACGAAGGTCCGGAATTCATGACCCGCGAGCTGATCAAGGTCGGTAACCGTGA CCTGAACGGCAACGACTTCACCTGGATCGTCGGCGAGTGGCTGACCGACCAGAAGAATCCGCCGGAGCTGATGGCGCTGG AGCGTCGTGAGTGGGGCAACTTCTACGGCTACCTGGTCAACGTCAAACAGGACGGCAAGGTGATCGCCGAAGGCGAAGCC GCCTGGCCTGAGCTGCAAGCGCGGATCGATCGCGTGAACAAACTTGCCGCCCAGCTCAAGACTCTGGAAAAAGTCGATAT CGGTGCGATCAACGCCGGCCTCGAGCGCATCCGTCTGCACGGTCGCAAGCTGGAACTGGAAGGCAAGCTCGACGCCACCG CACAAGCGGACATGGAATCCGAGCGCGCCGAGCTGAACGCCCGCTATCAGGACATCGAGGCTCGTCTGGCCGACCTGCAC GCGCAGTTCAACCGTGACGCCTTGACCGCTCGTGATGCGAACGGCAAGGAAATCGAAATCGGCCTGGGCAAAGTGGTTCA CGCCTACCAGCCGAACGCGATGGGTACGTTCACCAAGATCGGTTTCTACTTCAGCAAGGTCTGGGAATTCCTGTCCGACG ACCCGCGTGAAGCGAACACCGAAGGCGGGATTTTCCCGGCGATCTTCGGCACCGTGATGATGACCCTGATCATGGCGATG ATCGTGACCCCGTTCGGCGTGCTGGCGGCGGTATACCTGCGTGAATACGCCAAGCAGAACACCCTGACCCGGGTGATCCG GATCGCGGTGAATAACCTGGCGGGTGTTCCGGCGATTGTTTACGGCGTGTTCGGTCTGGGCTTCTTCGTCTACGTGCTGG GTGGCTCGCTCGACCGTCTGTTCTTCCCTGAAGCGCTGCCGGCACCGACCTTCGGTACGCCGGGTCTGCTCTGGGCTTCG TTGACCCTGGCGCTGCTGGCGGTGCCGGTGGTGATCGTGGCCACTGAAGAAGGTCTGGCGCGGATTCCTCGCACCGTGCG TGAAGGCTCGCTGGCTCTGGGCGCGACCAAGGCTGAAACCCTGTGGAAGATCGTTCTGCCGATGGCCAGTCCGGCCATGA TGACCGGCATGATCCTCGCCGTGGCCCGCGCCGCCGGTGAAGTGGCGCCGCTGATGCTGGTGGGTGTGGTGAAACTGGCG CCGTCGCTGCCGGTGGACGGCAACTACCCGTACCTGCACCTGGATCAGAAGATCATGCACCTGGGCTTCCACATCTATGA CGTCGGCTTCCAGAGCCCGAACGTCGAGGCCGCGCGGCCGCTGGTGTACGCCACGGCGCTGTTGCTGGTGCTGGTGATCG CCACCCTGAACCTGTCGGCGGTGTACATCCGTAACCACCTGCGCGAGAAGTACAAGGCGCTGGACAGCTGA
Upstream 100 bases:
>100_bases GGTGCTGCTGTTGTTCACCTTCGTCATGAACACCCTCGCAGAACTGATTCGTCAGCGTCTGCGCAAGAAATACTCGTCGC TTTAAGAAAGGTAGAAGTCT
Downstream 100 bases:
>100_bases TCGCCGTCACAAGAATTGAAGGGCTGCCGGCCTGTATCCCGGCAGCCAACCGAACCGAATTTGTTAGCACAGGGGATCTC CCATGCAGCACGAAACACAT
Product: phosphate ABC transporter permease
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 556; Mature: 556
Protein sequence:
>556_residues MKQNSLKGWFKSGAPGVWISGGAVSIAVIMTIGLLAVIAVRGLGHFWPADLIHASYDVPGQGQHLVVGEVVQKEEVPRAR LKSAGLPVPDEGPEFMTRELIKVGNRDLNGNDFTWIVGEWLTDQKNPPELMALERREWGNFYGYLVNVKQDGKVIAEGEA AWPELQARIDRVNKLAAQLKTLEKVDIGAINAGLERIRLHGRKLELEGKLDATAQADMESERAELNARYQDIEARLADLH AQFNRDALTARDANGKEIEIGLGKVVHAYQPNAMGTFTKIGFYFSKVWEFLSDDPREANTEGGIFPAIFGTVMMTLIMAM IVTPFGVLAAVYLREYAKQNTLTRVIRIAVNNLAGVPAIVYGVFGLGFFVYVLGGSLDRLFFPEALPAPTFGTPGLLWAS LTLALLAVPVVIVATEEGLARIPRTVREGSLALGATKAETLWKIVLPMASPAMMTGMILAVARAAGEVAPLMLVGVVKLA PSLPVDGNYPYLHLDQKIMHLGFHIYDVGFQSPNVEAARPLVYATALLLVLVIATLNLSAVYIRNHLREKYKALDS
Sequences:
>Translated_556_residues MKQNSLKGWFKSGAPGVWISGGAVSIAVIMTIGLLAVIAVRGLGHFWPADLIHASYDVPGQGQHLVVGEVVQKEEVPRAR LKSAGLPVPDEGPEFMTRELIKVGNRDLNGNDFTWIVGEWLTDQKNPPELMALERREWGNFYGYLVNVKQDGKVIAEGEA AWPELQARIDRVNKLAAQLKTLEKVDIGAINAGLERIRLHGRKLELEGKLDATAQADMESERAELNARYQDIEARLADLH AQFNRDALTARDANGKEIEIGLGKVVHAYQPNAMGTFTKIGFYFSKVWEFLSDDPREANTEGGIFPAIFGTVMMTLIMAM IVTPFGVLAAVYLREYAKQNTLTRVIRIAVNNLAGVPAIVYGVFGLGFFVYVLGGSLDRLFFPEALPAPTFGTPGLLWAS LTLALLAVPVVIVATEEGLARIPRTVREGSLALGATKAETLWKIVLPMASPAMMTGMILAVARAAGEVAPLMLVGVVKLA PSLPVDGNYPYLHLDQKIMHLGFHIYDVGFQSPNVEAARPLVYATALLLVLVIATLNLSAVYIRNHLREKYKALDS >Mature_556_residues MKQNSLKGWFKSGAPGVWISGGAVSIAVIMTIGLLAVIAVRGLGHFWPADLIHASYDVPGQGQHLVVGEVVQKEEVPRAR LKSAGLPVPDEGPEFMTRELIKVGNRDLNGNDFTWIVGEWLTDQKNPPELMALERREWGNFYGYLVNVKQDGKVIAEGEA AWPELQARIDRVNKLAAQLKTLEKVDIGAINAGLERIRLHGRKLELEGKLDATAQADMESERAELNARYQDIEARLADLH AQFNRDALTARDANGKEIEIGLGKVVHAYQPNAMGTFTKIGFYFSKVWEFLSDDPREANTEGGIFPAIFGTVMMTLIMAM IVTPFGVLAAVYLREYAKQNTLTRVIRIAVNNLAGVPAIVYGVFGLGFFVYVLGGSLDRLFFPEALPAPTFGTPGLLWAS LTLALLAVPVVIVATEEGLARIPRTVREGSLALGATKAETLWKIVLPMASPAMMTGMILAVARAAGEVAPLMLVGVVKLA PSLPVDGNYPYLHLDQKIMHLGFHIYDVGFQSPNVEAARPLVYATALLLVLVIATLNLSAVYIRNHLREKYKALDS
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0581
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790163, Length=251, Percent_Identity=31.8725099601594, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1790164, Length=217, Percent_Identity=29.9539170506912, Blast_Score=76, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 60712; Mature: 60712
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQNSLKGWFKSGAPGVWISGGAVSIAVIMTIGLLAVIAVRGLGHFWPADLIHASYDVPG CCCCCCCHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCC QGQHLVVGEVVQKEEVPRARLKSAGLPVPDEGPEFMTRELIKVGNRDLNGNDFTWIVGEW CCCEEEHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEH LTDQKNPPELMALERREWGNFYGYLVNVKQDGKVIAEGEAAWPELQARIDRVNKLAAQLK HCCCCCCHHHHHHHHHHCCCEEEEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHH TLEKVDIGAINAGLERIRLHGRKLELEGKLDATAQADMESERAELNARYQDIEARLADLH HHHHHCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AQFNRDALTARDANGKEIEIGLGKVVHAYQPNAMGTFTKIGFYFSKVWEFLSDDPREANT HHHCCCCCEECCCCCCEEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC EGGIFPAIFGTVMMTLIMAMIVTPFGVLAAVYLREYAKQNTLTRVIRIAVNNLAGVPAIV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH YGVFGLGFFVYVLGGSLDRLFFPEALPAPTFGTPGLLWASLTLALLAVPVVIVATEEGLA HHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEEECCHHHH RIPRTVREGSLALGATKAETLWKIVLPMASPAMMTGMILAVARAAGEVAPLMLVGVVKLA HCCHHHHCCCEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC PSLPVDGNYPYLHLDQKIMHLGFHIYDVGFQSPNVEAARPLVYATALLLVLVIATLNLSA CCCCCCCCCCEEEECHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHH VYIRNHLREKYKALDS HHHHHHHHHHHHHCCC >Mature Secondary Structure MKQNSLKGWFKSGAPGVWISGGAVSIAVIMTIGLLAVIAVRGLGHFWPADLIHASYDVPG CCCCCCCHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCC QGQHLVVGEVVQKEEVPRARLKSAGLPVPDEGPEFMTRELIKVGNRDLNGNDFTWIVGEW CCCEEEHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEH LTDQKNPPELMALERREWGNFYGYLVNVKQDGKVIAEGEAAWPELQARIDRVNKLAAQLK HCCCCCCHHHHHHHHHHCCCEEEEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHH TLEKVDIGAINAGLERIRLHGRKLELEGKLDATAQADMESERAELNARYQDIEARLADLH HHHHHCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AQFNRDALTARDANGKEIEIGLGKVVHAYQPNAMGTFTKIGFYFSKVWEFLSDDPREANT HHHCCCCCEECCCCCCEEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC EGGIFPAIFGTVMMTLIMAMIVTPFGVLAAVYLREYAKQNTLTRVIRIAVNNLAGVPAIV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH YGVFGLGFFVYVLGGSLDRLFFPEALPAPTFGTPGLLWASLTLALLAVPVVIVATEEGLA HHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEEECCHHHH RIPRTVREGSLALGATKAETLWKIVLPMASPAMMTGMILAVARAAGEVAPLMLVGVVKLA HCCHHHHCCCEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC PSLPVDGNYPYLHLDQKIMHLGFHIYDVGFQSPNVEAARPLVYATALLLVLVIATLNLSA CCCCCCCCCCEEEECHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHH VYIRNHLREKYKALDS HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]