Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77461812
Identifier: 77461812
GI number: 77461812
Start: 6262751
End: 6263134
Strand: Reverse
Name: 77461812
Synonym: Pfl01_5591
Alternate gene names: NA
Gene position: 6263134-6262751 (Counterclockwise)
Preceding gene: 77461813
Following gene: 77461811
Centisome position: 97.28
GC content: 54.95
Gene sequence:
>384_bases ATGACTAGGTTCGCCGGTTTCATCCTGCTGTTTGTTTCCTTGTACGGCTGTGCGGCGCAGCAGGTCTACAACAACCATGT GTACATGGAGAACCGTTGTGGCCAGCCACTCGAGATGAAGGTTTCCAATAGCTCAAACATGCACTCACTGGATCGCACCC TGACAGTTGCAGCAGGCGCTCGTGCGCTCGTGGCGAGTTTTGCCTCGTACGGTGAAGACGTGATCGAACAGATCCCGAGC AACTATCAGCTGACCATCGACGACGCTGCGGGCAGTAAATCCATTGACGCCACTCAGTTGAAACAGCGCCTGGCAGTTGT CGAGAAAGTTACTGAAGGAACCCAGCGCGAGTGGACGATCCGTGAGGCTTCGATCTGCCCATGA
Upstream 100 bases:
>100_bases TTCAGCAGCTACACCCAGACGTCCACCAACCTGCAGAAGCGCATGGCCGCTTCTGAACAGGACGTGAAAAGCCTGCTTTG GTTGGCCAGGGTTGAATTCA
Downstream 100 bases:
>100_bases AGCTGTCAGGAATCATCTGCATGTTGGGCTGGTCCGGGCCTTTCGCGTTTTTGGCCACGTTGACTGCCTGCGCTGCTCAA CGGGTCTATCGCAATGACGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MTRFAGFILLFVSLYGCAAQQVYNNHVYMENRCGQPLEMKVSNSSNMHSLDRTLTVAAGARALVASFASYGEDVIEQIPS NYQLTIDDAAGSKSIDATQLKQRLAVVEKVTEGTQREWTIREASICP
Sequences:
>Translated_127_residues MTRFAGFILLFVSLYGCAAQQVYNNHVYMENRCGQPLEMKVSNSSNMHSLDRTLTVAAGARALVASFASYGEDVIEQIPS NYQLTIDDAAGSKSIDATQLKQRLAVVEKVTEGTQREWTIREASICP >Mature_126_residues TRFAGFILLFVSLYGCAAQQVYNNHVYMENRCGQPLEMKVSNSSNMHSLDRTLTVAAGARALVASFASYGEDVIEQIPSN YQLTIDDAAGSKSIDATQLKQRLAVVEKVTEGTQREWTIREASICP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14009; Mature: 13878
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRFAGFILLFVSLYGCAAQQVYNNHVYMENRCGQPLEMKVSNSSNMHSLDRTLTVAAGA CCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHH RALVASFASYGEDVIEQIPSNYQLTIDDAAGSKSIDATQLKQRLAVVEKVTEGTQREWTI HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE REASICP CCCCCCC >Mature Secondary Structure TRFAGFILLFVSLYGCAAQQVYNNHVYMENRCGQPLEMKVSNSSNMHSLDRTLTVAAGA CHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHH RALVASFASYGEDVIEQIPSNYQLTIDDAAGSKSIDATQLKQRLAVVEKVTEGTQREWTI HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE REASICP CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA