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The map label for this gene is 77461801

Identifier: 77461801

GI number: 77461801

Start: 6252113

End: 6252613

Strand: Reverse

Name: 77461801

Synonym: Pfl01_5580

Alternate gene names: NA

Gene position: 6252613-6252113 (Counterclockwise)

Preceding gene: 77461802

Following gene: 77461800

Centisome position: 97.11

GC content: 60.68

Gene sequence:

>501_bases
ATGTCTCGCCGCTCGACCGCTTTTTTCAAGACGCTGACCGCGCTCACCCTGTTGGTGCTGCTCGCCGGTTGCTCGTCGCT
GTCGCCGTATTCGAAAGTGACCAAGATCAACCTGAAGCTGACCGGCAGCGATCAATTGAACCCGGACCTCAACGGTCGTC
CGTCGCCGATCGTGGTGCGCCTGTTCGAACTCAAGCACCCGGTGACGTTCGAGAACGCCGATTTCTTCAGCCTCTACGAG
CGCGCGAAGGAATCCCTCAACCCGGATCTGGTGGCCAGCGAAGAACTCGAACTGCGCCCGGGTGAAACCGTGGAGCTGAA
ACTCAGTGTGGAGGAGGGCAGCCGCTTCATCGGCATCCTCGCCGCGTACCGTGACCTGCCGGAAACCAAATGGCGCCACA
CGTTCCCGATCACACCGCTGGAAGTCACCGAAGCCGATCTGACCCTGGATCAGGCCGGTATCCGCAAGACCAACGAAGTG
CTCGCCAAGGCGGATGACTGA

Upstream 100 bases:

>100_bases
ACTGGAGCGAGCGCCTGCTGGCCCGCGACTTCGCCCAGGCCTACGAAGAACAGATCCGCCTGATCTCCACCCTCCACACC
GACCACCAAGGATGATGCGC

Downstream 100 bases:

>100_bases
CCATGAATACCCATAAAGTCATCTGGCAGGAAGGCATGCTGCTGCGCCCGCAGCACTTCCAGCACAACGACCGCTACTAC
GATCACCAGATGAAGACCCG

Product: putative lipoprotein

Products: NA

Alternate protein names: Type VI Secretion Lipoprotein; Type VI Secretion Lipoprotein/VasD; SciN Protein; Type VI Secretion Lipoprotein Family; Replication/Virulence Associated Protein; Outer Membrane Lipoprotein; Type VI Secretion Protein VasD

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MSRRSTAFFKTLTALTLLVLLAGCSSLSPYSKVTKINLKLTGSDQLNPDLNGRPSPIVVRLFELKHPVTFENADFFSLYE
RAKESLNPDLVASEELELRPGETVELKLSVEEGSRFIGILAAYRDLPETKWRHTFPITPLEVTEADLTLDQAGIRKTNEV
LAKADD

Sequences:

>Translated_166_residues
MSRRSTAFFKTLTALTLLVLLAGCSSLSPYSKVTKINLKLTGSDQLNPDLNGRPSPIVVRLFELKHPVTFENADFFSLYE
RAKESLNPDLVASEELELRPGETVELKLSVEEGSRFIGILAAYRDLPETKWRHTFPITPLEVTEADLTLDQAGIRKTNEV
LAKADD
>Mature_165_residues
SRRSTAFFKTLTALTLLVLLAGCSSLSPYSKVTKINLKLTGSDQLNPDLNGRPSPIVVRLFELKHPVTFENADFFSLYER
AKESLNPDLVASEELELRPGETVELKLSVEEGSRFIGILAAYRDLPETKWRHTFPITPLEVTEADLTLDQAGIRKTNEVL
AKADD

Specific function: Unknown

COG id: COG3521

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18520; Mature: 18389

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRSTAFFKTLTALTLLVLLAGCSSLSPYSKVTKINLKLTGSDQLNPDLNGRPSPIVVR
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEE
LFELKHPVTFENADFFSLYERAKESLNPDLVASEELELRPGETVELKLSVEEGSRFIGIL
EEECCCCCEECCCHHHHHHHHHHHHCCCCEEECCCEECCCCCEEEEEEECCCCCHHHHHH
AAYRDLPETKWRHTFPITPLEVTEADLTLDQAGIRKTNEVLAKADD
HHHHCCCCCCCCEECCCCCCEECCCCCEECHHCCCCHHHHHCCCCC
>Mature Secondary Structure 
SRRSTAFFKTLTALTLLVLLAGCSSLSPYSKVTKINLKLTGSDQLNPDLNGRPSPIVVR
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEE
LFELKHPVTFENADFFSLYERAKESLNPDLVASEELELRPGETVELKLSVEEGSRFIGIL
EEECCCCCEECCCHHHHHHHHHHHHCCCCEEECCCEECCCCCEEEEEEECCCCCHHHHHH
AAYRDLPETKWRHTFPITPLEVTEADLTLDQAGIRKTNEVLAKADD
HHHHCCCCCCCCEECCCCCCEECCCCCEECHHCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA