Click here to switch to the map view.

The map label for this gene is mcp4 [H]

Identifier: 77461736

GI number: 77461736

Start: 6180952

End: 6182928

Strand: Reverse

Name: mcp4 [H]

Synonym: Pfl01_5515

Alternate gene names: 77461736

Gene position: 6182928-6180952 (Counterclockwise)

Preceding gene: 77461737

Following gene: 77461727

Centisome position: 96.03

GC content: 62.87

Gene sequence:

>1977_bases
ATGTCTCAACCTCGCGCTCGGATCGCCTCGCAGCTGGGCCTCGCGCTCGCCGTGATACTGGCGATAGTCATCAGCGGCAG
TACGGTGTTCGCCCTGCGTTCGCTGGATACCGCCAACCTCGCCACCCGTGAAGAACACCTGGCCAGCGAGGCACGCCTGC
TCGCCGATCAGTTGAGCACTTTCCACGGCACGCTGCGTGAAAGCACCCAGCGCCTGAGCGGGCTGTTCGAGAAACGCTTC
AGCGCCGGCCTGAGCATTCATCCGAGCGAGCCGGTCAACGTCGCCGGCACCCAGGCCCCGGGCCTGCACCTGGGCAGCGA
AGTGTTGAACAACAACTTCAAGGAAGTCGACGAGTTCAAACAGATGACGGCGGGTGTCGCCACGCTGTTCGTGCGCAGCG
GCGAAGACTTCATCCGCGTCAGCACCTCGCTGACCAAACAGGATGGCACTCGCGCCATCGGCACCGTGCTCGATCACGCC
CACCCGGCCTACGCGAAGTTGATGGCAGGGCAGGGCTACGTCGGTCGTGCTCTGCTGTTCGATCGCTCCTACATGACCCA
ATACACCCCGGTGCGTGACAGCAGCGGCAAGGTGATTGCGGTGTTGTTCGTCGGCTTCGATTACACCGACGCGCAGAACG
CCCAGTTCGACAACCTCAAGCGCTTCCGCATCGGCCAGACCGGTTCGCTGGCATTGCTGGACGAGAAAAACCAATGGCTG
GTGGCGCCGGCGGGCGTGCAGGCGCTGGATCAAGCGATTCCTGTGGTCAACGATTTGGCGAAGGCGCCGGGTAAAGGCCG
GTTCTGGAGCGACAAGTCCGAAGATTTCTACAGCATTGCCGTGCCTTTCGAAGGCGGCCCGTGGTCGGTGGTGGCGAGCA
TGCCGAAGGCTGAGATCCGCGCGGTGACCTGGAGCGTCGGCACTCAGCTGGCCATCGGCAGTCTGCTGGCGATGTTGCTG
GCGGTCGGTTCCGTGGTCTGGTTGCTGCGCAGCAAACTGGCGCCGCTGGGCGATCTGGTCCGTCAGGCCGAAGCCTTGGG
CGCCGGTGATCTGAGTGTGCGTCTGAACGTGTCGAGCAATGACGAAATCGGCCAACTGGCCCGTGCGTTCAACCAGATGA
GCCAGGCCTTGTCGACCATGGTCGAGCACATCCGCCGCGCCTCGGAAGAGGTCAACCGTCGGGCTCAAGCGCTGTCCGGT
CTGTCTGGCGGCGCCTATGAAGGCATGGAGCAACAGTCTGGCGAAATTACCAGCATGGCCGGTGCGGTTGAAGAGTTCTC
CGCCACGTCGCTGAACATTGCCGACAACATGGGCAACACCCAGCGTCTGGCTCAGGAAAATGCCCAGCAGACCCAGATCG
GTCGCACCTCGATGGAAGAAGCATCTTCCTCGCTGGAGCAGATTGCCGGTGCGCTGAACACCACCGCGACCGTGATCAAC
ACCCTGGGTCAGCGCTCCCAGGAAATCGGCGGCATCGTCAGCGTGATTACCTCGATTGCCGAACAGACCAACCTGCTGGC
ACTCAACGCTGCCATCGAAGCGGCCCGTGCCGGCGAGCAGGGTCGCGGCTTTGCCGTGGTGGCCGACGAGGTGCGCAGCC
TGGCCTCGCGTACCCGTCAGGCGACGGATGAAATTTCCAGCATGATTCACAGTATTCAGCAGGAAACCGGCAACGCCATC
AGCAACATGGAGCAGGGCAACCTGCTGATGCAGGAAGGCCTGTCGCGCAACGCCAACGTCGCTTCGGCGCTGGCGCGGAT
CGATGAGCAGAGCCGTTCGGCAGGCCAGCAGTTTGCGGCGATTACCACCGCGACCCAGGAACAGAGCAGTACCGCGACGC
TGTTGAGCAGCAACCTGCAAAGCATCGCGATGGCCAACAGCGAGCAGCGCGAAGTGGTATCGAACCTGGCAATCACCGCC
AAGGAACTGGAAGGCCTGGCAGCCGACCTGCGCCAGGAAGTCGACCGCTTCCGTTGA

Upstream 100 bases:

>100_bases
GCATGTGGGACCGTCGTGCCGGTCTCCACGATTCACCCCCCATTAGAAAATTATCCGAGCTGCGATCAAGGAGGATCGGA
AGTTCGGCCAGGAGCTGTCC

Downstream 100 bases:

>100_bases
GGCGCCGTGCCCGCTTACTGGTAAGCGGAGAGGTCTTCGCTGGAGTCGACCTCTCCCCATTCTCCGCTGTAGGCCACGGC
CGCGACCGGAACCCGACCTG

Product: chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 658; Mature: 657

Protein sequence:

>658_residues
MSQPRARIASQLGLALAVILAIVISGSTVFALRSLDTANLATREEHLASEARLLADQLSTFHGTLRESTQRLSGLFEKRF
SAGLSIHPSEPVNVAGTQAPGLHLGSEVLNNNFKEVDEFKQMTAGVATLFVRSGEDFIRVSTSLTKQDGTRAIGTVLDHA
HPAYAKLMAGQGYVGRALLFDRSYMTQYTPVRDSSGKVIAVLFVGFDYTDAQNAQFDNLKRFRIGQTGSLALLDEKNQWL
VAPAGVQALDQAIPVVNDLAKAPGKGRFWSDKSEDFYSIAVPFEGGPWSVVASMPKAEIRAVTWSVGTQLAIGSLLAMLL
AVGSVVWLLRSKLAPLGDLVRQAEALGAGDLSVRLNVSSNDEIGQLARAFNQMSQALSTMVEHIRRASEEVNRRAQALSG
LSGGAYEGMEQQSGEITSMAGAVEEFSATSLNIADNMGNTQRLAQENAQQTQIGRTSMEEASSSLEQIAGALNTTATVIN
TLGQRSQEIGGIVSVITSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTRQATDEISSMIHSIQQETGNAI
SNMEQGNLLMQEGLSRNANVASALARIDEQSRSAGQQFAAITTATQEQSSTATLLSSNLQSIAMANSEQREVVSNLAITA
KELEGLAADLRQEVDRFR

Sequences:

>Translated_658_residues
MSQPRARIASQLGLALAVILAIVISGSTVFALRSLDTANLATREEHLASEARLLADQLSTFHGTLRESTQRLSGLFEKRF
SAGLSIHPSEPVNVAGTQAPGLHLGSEVLNNNFKEVDEFKQMTAGVATLFVRSGEDFIRVSTSLTKQDGTRAIGTVLDHA
HPAYAKLMAGQGYVGRALLFDRSYMTQYTPVRDSSGKVIAVLFVGFDYTDAQNAQFDNLKRFRIGQTGSLALLDEKNQWL
VAPAGVQALDQAIPVVNDLAKAPGKGRFWSDKSEDFYSIAVPFEGGPWSVVASMPKAEIRAVTWSVGTQLAIGSLLAMLL
AVGSVVWLLRSKLAPLGDLVRQAEALGAGDLSVRLNVSSNDEIGQLARAFNQMSQALSTMVEHIRRASEEVNRRAQALSG
LSGGAYEGMEQQSGEITSMAGAVEEFSATSLNIADNMGNTQRLAQENAQQTQIGRTSMEEASSSLEQIAGALNTTATVIN
TLGQRSQEIGGIVSVITSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTRQATDEISSMIHSIQQETGNAI
SNMEQGNLLMQEGLSRNANVASALARIDEQSRSAGQQFAAITTATQEQSSTATLLSSNLQSIAMANSEQREVVSNLAITA
KELEGLAADLRQEVDRFR
>Mature_657_residues
SQPRARIASQLGLALAVILAIVISGSTVFALRSLDTANLATREEHLASEARLLADQLSTFHGTLRESTQRLSGLFEKRFS
AGLSIHPSEPVNVAGTQAPGLHLGSEVLNNNFKEVDEFKQMTAGVATLFVRSGEDFIRVSTSLTKQDGTRAIGTVLDHAH
PAYAKLMAGQGYVGRALLFDRSYMTQYTPVRDSSGKVIAVLFVGFDYTDAQNAQFDNLKRFRIGQTGSLALLDEKNQWLV
APAGVQALDQAIPVVNDLAKAPGKGRFWSDKSEDFYSIAVPFEGGPWSVVASMPKAEIRAVTWSVGTQLAIGSLLAMLLA
VGSVVWLLRSKLAPLGDLVRQAEALGAGDLSVRLNVSSNDEIGQLARAFNQMSQALSTMVEHIRRASEEVNRRAQALSGL
SGGAYEGMEQQSGEITSMAGAVEEFSATSLNIADNMGNTQRLAQENAQQTQIGRTSMEEASSSLEQIAGALNTTATVINT
LGQRSQEIGGIVSVITSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTRQATDEISSMIHSIQQETGNAIS
NMEQGNLLMQEGLSRNANVASALARIDEQSRSAGQQFAAITTATQEQSSTATLLSSNLQSIAMANSEQREVVSNLAITAK
ELEGLAADLRQEVDRFR

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=354, Percent_Identity=32.2033898305085, Blast_Score=139, Evalue=5e-34,
Organism=Escherichia coli, GI1788195, Length=284, Percent_Identity=32.3943661971831, Blast_Score=133, Evalue=3e-32,
Organism=Escherichia coli, GI1788194, Length=279, Percent_Identity=31.8996415770609, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI2367378, Length=295, Percent_Identity=32.2033898305085, Blast_Score=122, Evalue=5e-29,
Organism=Escherichia coli, GI1789453, Length=385, Percent_Identity=27.2727272727273, Blast_Score=107, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 70303; Mature: 70172

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPRARIASQLGLALAVILAIVISGSTVFALRSLDTANLATREEHLASEARLLADQLST
CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
FHGTLRESTQRLSGLFEKRFSAGLSIHPSEPVNVAGTQAPGLHLGSEVLNNNFKEVDEFK
HHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHH
QMTAGVATLFVRSGEDFIRVSTSLTKQDGTRAIGTVLDHAHPAYAKLMAGQGYVGRALLF
HHHHHHHHHHHCCCCCCEEEHHHHHHCCCHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHH
DRSYMTQYTPVRDSSGKVIAVLFVGFDYTDAQNAQFDNLKRFRIGQTGSLALLDEKNQWL
HHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCHHCCHHHCCCCCCCEEEEECCCCEE
VAPAGVQALDQAIPVVNDLAKAPGKGRFWSDKSEDFYSIAVPFEGGPWSVVASMPKAEIR
EECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCHHHHH
AVTWSVGTQLAIGSLLAMLLAVGSVVWLLRSKLAPLGDLVRQAEALGAGDLSVRLNVSSN
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCC
DEIGQLARAFNQMSQALSTMVEHIRRASEEVNRRAQALSGLSGGAYEGMEQQSGEITSMA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHH
GAVEEFSATSLNIADNMGNTQRLAQENAQQTQIGRTSMEEASSSLEQIAGALNTTATVIN
HHHHHHCCCCEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLGQRSQEIGGIVSVITSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTRQ
HHHHHHHHHHHHHHHHHHHHHHHCEEEHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHH
ATDEISSMIHSIQQETGNAISNMEQGNLLMQEGLSRNANVASALARIDEQSRSAGQQFAA
HHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ITTATQEQSSTATLLSSNLQSIAMANSEQREVVSNLAITAKELEGLAADLRQEVDRFR
HHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SQPRARIASQLGLALAVILAIVISGSTVFALRSLDTANLATREEHLASEARLLADQLST
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
FHGTLRESTQRLSGLFEKRFSAGLSIHPSEPVNVAGTQAPGLHLGSEVLNNNFKEVDEFK
HHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHH
QMTAGVATLFVRSGEDFIRVSTSLTKQDGTRAIGTVLDHAHPAYAKLMAGQGYVGRALLF
HHHHHHHHHHHCCCCCCEEEHHHHHHCCCHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHH
DRSYMTQYTPVRDSSGKVIAVLFVGFDYTDAQNAQFDNLKRFRIGQTGSLALLDEKNQWL
HHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCHHCCHHHCCCCCCCEEEEECCCCEE
VAPAGVQALDQAIPVVNDLAKAPGKGRFWSDKSEDFYSIAVPFEGGPWSVVASMPKAEIR
EECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCHHHHH
AVTWSVGTQLAIGSLLAMLLAVGSVVWLLRSKLAPLGDLVRQAEALGAGDLSVRLNVSSN
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCC
DEIGQLARAFNQMSQALSTMVEHIRRASEEVNRRAQALSGLSGGAYEGMEQQSGEITSMA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHH
GAVEEFSATSLNIADNMGNTQRLAQENAQQTQIGRTSMEEASSSLEQIAGALNTTATVIN
HHHHHHCCCCEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLGQRSQEIGGIVSVITSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTRQ
HHHHHHHHHHHHHHHHHHHHHHHCEEEHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHH
ATDEISSMIHSIQQETGNAISNMEQGNLLMQEGLSRNANVASALARIDEQSRSAGQQFAA
HHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ITTATQEQSSTATLLSSNLQSIAMANSEQREVVSNLAITAKELEGLAADLRQEVDRFR
HHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]