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The map label for this gene is copB [H]

Identifier: 77460033

GI number: 77460033

Start: 4312543

End: 4313448

Strand: Direct

Name: copB [H]

Synonym: Pfl01_3811

Alternate gene names: 77460033

Gene position: 4312543-4313448 (Clockwise)

Preceding gene: 77460032

Following gene: 77460034

Centisome position: 66.98

GC content: 64.46

Gene sequence:

>906_bases
ATGAGGACGCCGACCATGACTCGATTTGCCGCGTTTTCGTTGTCGCTCCTGTCGATGGCTCCGGCCTTCGCCGCCAGCGA
CATGCAGGGTATGGATCACAGCCGGATGGCTGACATGCAAGGCATGGATCACAGTCAAATGACCGACATGCAGAGCATGG
ACGACGGCATGATGCAGCCCGCCGCGCCGACCGAAAGCCGCACGCCGATTCCGGCGCTGACCGACGCCGACCGCGCCGCC
GTGTTCACCAGTCACGCCGGGCATCAAGTGCACGACAGCGCCATCAACACTTACTTCCTCGCCGACAAACTCGAATGGCA
GGATGCCGACGACGCCAGCACCCTGGCCTGGGATTTGTCCGGCTGGATCGGCGGCGACATCGATCGGCTGTGGCTGCGCT
CCGAGGGCGAACGCAGCAACGGCAAGACCGAAGACGCGGAAATCCAGGCGCTGTGGGGCCACGCGATTTCGCCGTGGTGG
GACGTGGTCAGCGGCGTGCGCCAGGACTTCAAACCCGGCGCTCCACAAACCTGGGCCGCGTTCGGCCTGCAGGGCATGGC
GCTGTACAACTTCGAAGCCGAAGCCACGGCGTTCCTCGGCGAAAACGGCCAGAGCGCGGTGCGGCTGGAGGGTGACTACG
ACATCCTGCTGACCAATCGCCTGATCCTGCAGCCGACCGCCGAACTCAACGTCTATGGCAAAAACGACCCGCAACGCGGG
ATCGGCTCGGGCCTGTCGAACACCGAAGCCGGGCTGCGCCTGCGCTATGAAATCCGCCGCGAATTTGCGCCTTACATCGG
CGTGACCTGGAACCGTACCTACGGCCGCACCGCCGATTACGCACGGGAAGAAGGCGAGGATCGCAGCGAAGCGCGACTCG
TCCTCGGCGTACGGCTGTGGTTCTGA

Upstream 100 bases:

>100_bases
CTTACCGCGTGACCGCCGACGCGCTCGGCCATTGGGCCTATCACTGCCATCTCCTGTACCACATGGAAATGGGCATGTTC
CGCGAAGTGCGGGTGGAAGA

Downstream 100 bases:

>100_bases
ATCCCTTCAAAAAACAACACCGAGGTCTTGCATGCGCACATTGAAAATCTCCCTCGTCCTCGCCAGCGGTTTGCTCCTGA
GCACCCTGGCCCAGGCCCAT

Product: copper resistance B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MRTPTMTRFAAFSLSLLSMAPAFAASDMQGMDHSRMADMQGMDHSQMTDMQSMDDGMMQPAAPTESRTPIPALTDADRAA
VFTSHAGHQVHDSAINTYFLADKLEWQDADDASTLAWDLSGWIGGDIDRLWLRSEGERSNGKTEDAEIQALWGHAISPWW
DVVSGVRQDFKPGAPQTWAAFGLQGMALYNFEAEATAFLGENGQSAVRLEGDYDILLTNRLILQPTAELNVYGKNDPQRG
IGSGLSNTEAGLRLRYEIRREFAPYIGVTWNRTYGRTADYAREEGEDRSEARLVLGVRLWF

Sequences:

>Translated_301_residues
MRTPTMTRFAAFSLSLLSMAPAFAASDMQGMDHSRMADMQGMDHSQMTDMQSMDDGMMQPAAPTESRTPIPALTDADRAA
VFTSHAGHQVHDSAINTYFLADKLEWQDADDASTLAWDLSGWIGGDIDRLWLRSEGERSNGKTEDAEIQALWGHAISPWW
DVVSGVRQDFKPGAPQTWAAFGLQGMALYNFEAEATAFLGENGQSAVRLEGDYDILLTNRLILQPTAELNVYGKNDPQRG
IGSGLSNTEAGLRLRYEIRREFAPYIGVTWNRTYGRTADYAREEGEDRSEARLVLGVRLWF
>Mature_301_residues
MRTPTMTRFAAFSLSLLSMAPAFAASDMQGMDHSRMADMQGMDHSQMTDMQSMDDGMMQPAAPTESRTPIPALTDADRAA
VFTSHAGHQVHDSAINTYFLADKLEWQDADDASTLAWDLSGWIGGDIDRLWLRSEGERSNGKTEDAEIQALWGHAISPWW
DVVSGVRQDFKPGAPQTWAAFGLQGMALYNFEAEATAFLGENGQSAVRLEGDYDILLTNRLILQPTAELNVYGKNDPQRG
IGSGLSNTEAGLRLRYEIRREFAPYIGVTWNRTYGRTADYAREEGEDRSEARLVLGVRLWF

Specific function: Exact function not known. Possibly mediates copper resistance by its sequestration in the outer membrane [H]

COG id: COG3667

COG function: function code P; Uncharacterized protein involved in copper resistance

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007939 [H]

Pfam domain/function: PF05275 CopB [H]

EC number: NA

Molecular weight: Translated: 33484; Mature: 33484

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTPTMTRFAAFSLSLLSMAPAFAASDMQGMDHSRMADMQGMDHSQMTDMQSMDDGMMQP
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCC
AAPTESRTPIPALTDADRAAVFTSHAGHQVHDSAINTYFLADKLEWQDADDASTLAWDLS
CCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHCEEEEECCCCCCCCCCCCEEEEECC
GWIGGDIDRLWLRSEGERSNGKTEDAEIQALWGHAISPWWDVVSGVRQDFKPGAPQTWAA
CCCCCCHHHEEECCCCCCCCCCCCCHHEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHH
FGLQGMALYNFEAEATAFLGENGQSAVRLEGDYDILLTNRLILQPTAELNVYGKNDPQRG
HCCCCEEEEECCCCEEEEECCCCCCEEEECCCEEEEEECEEEEECCCEEEEEECCCCCHH
IGSGLSNTEAGLRLRYEIRREFAPYIGVTWNRTYGRTADYAREEGEDRSEARLVLGVRLW
HCCCCCCCCCCEEEHHHHHHHCCCEEEEEECCCCCCCHHHHHHCCCCCCCEEEEEEEEEC
F
C
>Mature Secondary Structure
MRTPTMTRFAAFSLSLLSMAPAFAASDMQGMDHSRMADMQGMDHSQMTDMQSMDDGMMQP
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCC
AAPTESRTPIPALTDADRAAVFTSHAGHQVHDSAINTYFLADKLEWQDADDASTLAWDLS
CCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHCEEEEECCCCCCCCCCCCEEEEECC
GWIGGDIDRLWLRSEGERSNGKTEDAEIQALWGHAISPWWDVVSGVRQDFKPGAPQTWAA
CCCCCCHHHEEECCCCCCCCCCCCCHHEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHH
FGLQGMALYNFEAEATAFLGENGQSAVRLEGDYDILLTNRLILQPTAELNVYGKNDPQRG
HCCCCEEEEECCCCEEEEECCCCCCEEEECCCEEEEEECEEEEECCCEEEEEECCCCCHH
IGSGLSNTEAGLRLRYEIRREFAPYIGVTWNRTYGRTADYAREEGEDRSEARLVLGVRLW
HCCCCCCCCCCEEEHHHHHHHCCCEEEEEECCCCCCCHHHHHHCCCCCCCEEEEEEEEEC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3372485; 1924351 [H]