| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459948
Identifier: 77459948
GI number: 77459948
Start: 4212431
End: 4213057
Strand: Direct
Name: 77459948
Synonym: Pfl01_3726
Alternate gene names: NA
Gene position: 4212431-4213057 (Clockwise)
Preceding gene: 77459947
Following gene: 77459950
Centisome position: 65.43
GC content: 50.24
Gene sequence:
>627_bases GTGCGTAAGATCACCAAGGGAGTCGAGCCGGAACAACTGACGAAGTGGAAACGAGCTAACAGCAAGCTGCGTTATGGGAG CTTGCCGCCAGAAGAACGGCAATCGATCAGAGCAGCCTGCATTAAGGAACAACGTGGACTTTGCGCCTATTGCTGTCAGA GCATCACGGTTGAAGCCGCGCATAACGAACACATTGAAGCTCAGGATAAGACCCCCGCTCGCACGTTGGACTTTAGCAAT ATCGTCGCCAGTTGCGAGAATCGCTCCCACTGCGGCCATGGTCGAAAAACGAAACGTCTAACCCTCACACCGTTGATGGA CGAATGCGAAAACGAACTCAAGTTTTATCTTAATGGTCTGGTGAAAGGTACGAGCGACCGAGCAAGAGCATCCATTCAAG CATTGAATTTGGGCCACACTGAAGAAAGCAATCGCGGCTTAGTGGGCAGGCGAAGATCTATGGTTGAAACCTTGATTTAT GGCTCGAGACTTACGCCGGAAGAGCTGCTGGATATTGAGGACAAGGAGCTATTGAACATGCTTGCAGACGAGTTTGCGTC TCCAGTCGAAGGAAATCTTCAGCCCTTTTCACCCGTTTTGGTCAACGTAATCCGCCAACTTCTTTAA
Upstream 100 bases:
>100_bases ACCGCACAGAAGCTATTCGCCGAACTGACAGAAGAACTTCCAGACGGTCATATCGAACTGGCGAAAGCAGCGCTGTTGCT GCGCAAGCTGGAGCTGCGCC
Downstream 100 bases:
>100_bases TTGATTCCGCTCCATTGAGCAAAAAATGGCGAACGTTTAACCACGTTCGCCATTTTTATTCAGAGCCTGCCTCAATCAAT CATCCGGCATTTCCGGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MRKITKGVEPEQLTKWKRANSKLRYGSLPPEERQSIRAACIKEQRGLCAYCCQSITVEAAHNEHIEAQDKTPARTLDFSN IVASCENRSHCGHGRKTKRLTLTPLMDECENELKFYLNGLVKGTSDRARASIQALNLGHTEESNRGLVGRRRSMVETLIY GSRLTPEELLDIEDKELLNMLADEFASPVEGNLQPFSPVLVNVIRQLL
Sequences:
>Translated_208_residues MRKITKGVEPEQLTKWKRANSKLRYGSLPPEERQSIRAACIKEQRGLCAYCCQSITVEAAHNEHIEAQDKTPARTLDFSN IVASCENRSHCGHGRKTKRLTLTPLMDECENELKFYLNGLVKGTSDRARASIQALNLGHTEESNRGLVGRRRSMVETLIY GSRLTPEELLDIEDKELLNMLADEFASPVEGNLQPFSPVLVNVIRQLL >Mature_208_residues MRKITKGVEPEQLTKWKRANSKLRYGSLPPEERQSIRAACIKEQRGLCAYCCQSITVEAAHNEHIEAQDKTPARTLDFSN IVASCENRSHCGHGRKTKRLTLTPLMDECENELKFYLNGLVKGTSDRARASIQALNLGHTEESNRGLVGRRRSMVETLIY GSRLTPEELLDIEDKELLNMLADEFASPVEGNLQPFSPVLVNVIRQLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23463; Mature: 23463
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKITKGVEPEQLTKWKRANSKLRYGSLPPEERQSIRAACIKEQRGLCAYCCQSITVEAA CCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC HNEHIEAQDKTPARTLDFSNIVASCENRSHCGHGRKTKRLTLTPLMDECENELKFYLNGL CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHH VKGTSDRARASIQALNLGHTEESNRGLVGRRRSMVETLIYGSRLTPEELLDIEDKELLNM HCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHH LADEFASPVEGNLQPFSPVLVNVIRQLL HHHHHCCCCCCCCCCCHHHHHHHHHHHC >Mature Secondary Structure MRKITKGVEPEQLTKWKRANSKLRYGSLPPEERQSIRAACIKEQRGLCAYCCQSITVEAA CCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC HNEHIEAQDKTPARTLDFSNIVASCENRSHCGHGRKTKRLTLTPLMDECENELKFYLNGL CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHH VKGTSDRARASIQALNLGHTEESNRGLVGRRRSMVETLIYGSRLTPEELLDIEDKELLNM HCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHH LADEFASPVEGNLQPFSPVLVNVIRQLL HHHHHCCCCCCCCCCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA